def rollback(serie):
if os.path.exists(serie["path"]):
shutil.rmtree(serie["path"])
seriesDB = list(Serie.selectBy(uid=serie["uid"], description=serie["serieDescription"]))
if seriesDB:
serieDB = list(seriesDB)[0]
study = serieDB.study
patient = study.patient
toRemove = serieDB.delete()
serieList = list(Serie.selectBy(uid = serieDB.uid))
if not serieList:
imagePath = os.path.join(patient.directory, serieDB.uid)
if os.path.exists(imagePath):
shutil.rmtree(imagePath)
serieList = list(Serie.selectBy(study=study))
if not serieList:
toRemove = study.delete()
for remove in toRemove:
if os.path.exists(remove):
shutil.rmtree(remove)
studyList = list(Study.selectBy(patient=patient))
if not studyList:
toRemove =patient.delete()
for remove in toRemove:
if os.path.exists(remove):
shutil.rmtree(remove)
def updateDatabase(serie):
logging.debug("In Importer::updateDatabase()")
patient = list(Patient.selectBy(uid=serie["patientUID"]))
if not patient:
patient = Patient(uid=serie["patientUID"],
name=serie["patientName"],
birthdate=serie["patientBirthdate"],
sex=serie["patientSex"],
tmp = False,
directory=serie["patientPath"])
else:
patient = patient[0]
study = list(Study.selectBy(uid=serie["studyUID"]))
if not study:
study = Study(uid = serie["studyUID"],
modality=serie["studyModality"],
description=serie["studyDescription"],
institution=serie["studyInstitution"],
tmp=False,
patient=patient)
else:
study = study[0]
serieDB = list(Serie.selectBy(uid=serie["uid"], description=serie["serieDescription"]))
if serieDB:
serieDB = serieDB[0]
serieDB.file = serie["yaml"]
serieDB.description = serie["serieDescription"]
serieDB.thickness = serie["serieThickness"]
serieDB.size = serie["serieSize"]
serieDB.zSpacing = serie["zspacing"]
serieDB.dicomImages = len(serie["files"])
else:
Serie(uid=serie["uid"],
file=serie["yaml"],
description=serie["serieDescription"],
thickness=serie["serieThickness"],
size=serie["serieSize"],
zSpacing=serie["zspacing"],
tmp = False,
dicomImages = len(serie["files"]),
study=study)
def serieExists(serieID, description):
if list(Serie.select("uid='{0}' AND description='{1}'".format(serieID, description))):
return True
return False
