def curvelinear_test2(fig): """ polar projection, but in a rectangular box. """ tr = Affine2D().scale(np.pi/180., 1.) + PolarAxes.PolarTransform() extreme_finder = angle_helper.ExtremeFinderCycle(20, 20, lon_cycle = 360, lat_cycle = None, lon_minmax = None, lat_minmax = (0, np.inf), ) grid_locator1 = angle_helper.LocatorDMS(12) tick_formatter1 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1 ) ax1 = SubplotHost(fig, 1, 2, 2, grid_helper=grid_helper) ax1.axis["right"].major_ticklabels.set_visible(True) ax1.axis["top"].major_ticklabels.set_visible(True) ax1.axis["right"].get_helper().nth_coord_ticks=0 ax1.axis["bottom"].get_helper().nth_coord_ticks=1 fig.add_subplot(ax1) ax2 = ParasiteAxesAuxTrans(ax1, tr, "equal") ax1.parasites.append(ax2) intp = cbook.simple_linear_interpolation ax2.plot(intp(np.array([0, 30]), 50), intp(np.array([10., 10.]), 50)) ax1.set_aspect(1.) ax1.set_xlim(-5, 12) ax1.set_ylim(-5, 10) ax1.grid(True)
def test_polar_box(): # Remove this line when this test image is regenerated. plt.rcParams['text.kerning_factor'] = 6 fig = plt.figure(figsize=(5, 5)) # PolarAxes.PolarTransform takes radian. However, we want our coordinate # system in degree tr = Affine2D().scale(np.pi / 180., 1.) + PolarAxes.PolarTransform() # polar projection, which involves cycle, and also has limits in # its coordinates, needs a special method to find the extremes # (min, max of the coordinate within the view). extreme_finder = angle_helper.ExtremeFinderCycle(20, 20, lon_cycle=360, lat_cycle=None, lon_minmax=None, lat_minmax=(0, np.inf)) grid_locator1 = angle_helper.LocatorDMS(12) tick_formatter1 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) ax1.axis["right"].major_ticklabels.set_visible(True) ax1.axis["top"].major_ticklabels.set_visible(True) # let right axis shows ticklabels for 1st coordinate (angle) ax1.axis["right"].get_helper().nth_coord_ticks = 0 # let bottom axis shows ticklabels for 2nd coordinate (radius) ax1.axis["bottom"].get_helper().nth_coord_ticks = 1 fig.add_subplot(ax1) ax1.axis["lat"] = axis = grid_helper.new_floating_axis(0, 45, axes=ax1) axis.label.set_text("Test") axis.label.set_visible(True) axis.get_helper().set_extremes(2, 12) ax1.axis["lon"] = axis = grid_helper.new_floating_axis(1, 6, axes=ax1) axis.label.set_text("Test 2") axis.get_helper().set_extremes(-180, 90) # A parasite axes with given transform ax2 = ParasiteAxes(ax1, tr, viewlim_mode="equal") assert ax2.transData == tr + ax1.transData # Anything you draw in ax2 will match the ticks and grids of ax1. ax1.parasites.append(ax2) ax2.plot(np.linspace(0, 30, 50), np.linspace(10, 10, 50)) ax1.set_aspect(1.) ax1.set_xlim(-5, 12) ax1.set_ylim(-5, 10) ax1.grid(True)
def curvelinear_test2(fig): """ polar projection, but in a rectangular box. """ # PolarAxes.PolarTransform takes radian. However, we want our coordinate # system in degree tr = Affine2D().scale(np.pi/180., 1.) + PolarAxes.PolarTransform() # polar projection, which involves cycle, and also has limits in # its coordinates, needs a special method to find the extremes # (min, max of the coordinate within the view). # 20, 20 : number of sampling points along x, y direction extreme_finder = angle_helper.ExtremeFinderCycle(50, 50, lon_cycle = 360, lat_cycle = None, lon_minmax = None, lat_minmax = (0, np.inf), ) grid_locator1 = angle_helper.LocatorDMS(12) # Find a grid values appropriate for the coordinate (degree, # minute, second). tick_formatter1 = angle_helper.FormatterDMS() # And also uses an appropriate formatter. Note that,the # acceptable Locator and Formatter class is a bit different than # that of mpl's, and you cannot directly use mpl's Locator and # Formatter here (but may be possible in the future). grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1 ) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) # make ticklabels of right and top axis visible. ax1.axis["right"].major_ticklabels.set_visible(True) ax1.axis["top"].major_ticklabels.set_visible(True) ax1.axis["left"].major_ticklabels.set_visible(True) # let right axis shows ticklabels for 1st coordinate (angle) ax1.axis["right"].get_helper().nth_coord_ticks=0 # let bottom axis shows ticklabels for 2nd coordinate (radius) ax1.axis["bottom"].get_helper().nth_coord_ticks=0 ax1.axis["left"].get_helper().nth_coord_ticks=0 fig.add_subplot(ax1) ax1.quiver(0,0,50,50,angles='xy',scale_units='xy',scale=1) ax1.set_aspect(1.) ax1.set_xlim(-100, 100) ax1.set_ylim(-100, 100) ax1.grid(True)
def test_custom_transform(): class MyTransform(Transform): input_dims = output_dims = 2 def __init__(self, resolution): """ Resolution is the number of steps to interpolate between each input line segment to approximate its path in transformed space. """ Transform.__init__(self) self._resolution = resolution def transform(self, ll): x, y = ll.T return np.column_stack([x, y - x]) transform_non_affine = transform def transform_path(self, path): ipath = path.interpolated(self._resolution) return Path(self.transform(ipath.vertices), ipath.codes) transform_path_non_affine = transform_path def inverted(self): return MyTransformInv(self._resolution) class MyTransformInv(Transform): input_dims = output_dims = 2 def __init__(self, resolution): Transform.__init__(self) self._resolution = resolution def transform(self, ll): x, y = ll.T return np.column_stack([x, y + x]) def inverted(self): return MyTransform(self._resolution) fig = plt.figure() SubplotHost = host_subplot_class_factory(Axes) tr = MyTransform(1) grid_helper = GridHelperCurveLinear(tr) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) fig.add_subplot(ax1) ax2 = ParasiteAxes(ax1, tr, viewlim_mode="equal") ax1.parasites.append(ax2) ax2.plot([3, 6], [5.0, 10.]) ax1.set_aspect(1.) ax1.set_xlim(0, 10) ax1.set_ylim(0, 10) ax1.grid(True)
def curvelinear_test2(fig, rect=111): """ Polar projection, but in a rectangular box. """ # see demo_curvelinear_grid.py for details tr = Affine2D().translate(0, 90) + Affine2D().scale(np.pi / 180., 1.) + \ PolarAxes.PolarTransform() extreme_finder = angle_helper.ExtremeFinderCycle( 10, 60, lon_cycle=360, lat_cycle=None, lon_minmax=None, lat_minmax=(-90, np.inf), ) # Changes theta gridline count grid_locator1 = angle_helper.LocatorHMS(12) grid_locator2 = angle_helper.LocatorDMS(6) tick_formatter1 = angle_helper.FormatterHMS() tick_formatter2 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, grid_locator2=grid_locator2, tick_formatter1=tick_formatter1, tick_formatter2=tick_formatter2) ax1 = SubplotHost(fig, rect, grid_helper=grid_helper) # make ticklabels of right and top axis visible. ax1.axis["right"].major_ticklabels.set_visible(True) ax1.axis["top"].major_ticklabels.set_visible(True) ax1.axis["bottom"].major_ticklabels.set_visible(True) # let right and bottom axis show ticklabels for 1st coordinate (angle) ax1.axis["right"].get_helper().nth_coord_ticks = 0 ax1.axis["bottom"].get_helper().nth_coord_ticks = 0 # fig.add_subplot(ax1) grid_helper = ax1.get_grid_helper() # You may or may not need these - they set the view window explicitly # rather than using the default as determined by matplotlib with extreme # finder. ax1.set_aspect(1.) ax1.set_xlim(-4, 25) # moves the origin left-right in ax1 ax1.set_ylim(-2.5, 30) # moves the origin up-down ax1.set_ylabel('$DEC\,(^{\circ})$') ax1.set_xlabel('$RA\,(h)$') ax1.grid(True) # ax1.grid(linestyle='--', which='x') # either keyword applies to both # ax1.grid(linestyle=':', which='y') # sets of gridlines return ax1, tr
def test_polar_box(): fig = plt.figure(figsize=(5, 5)) # PolarAxes.PolarTransform takes radian. However, we want our coordinate # system in degree tr = Affine2D().scale(np.pi / 180., 1.) + PolarAxes.PolarTransform() # polar projection, which involves cycle, and also has limits in # its coordinates, needs a special method to find the extremes # (min, max of the coordinate within the view). extreme_finder = angle_helper.ExtremeFinderCycle(20, 20, lon_cycle=360, lat_cycle=None, lon_minmax=None, lat_minmax=(0, np.inf)) grid_locator1 = angle_helper.LocatorDMS(12) tick_formatter1 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) ax1.axis["right"].major_ticklabels.set_visible(True) ax1.axis["top"].major_ticklabels.set_visible(True) # let right axis shows ticklabels for 1st coordinate (angle) ax1.axis["right"].get_helper().nth_coord_ticks = 0 # let bottom axis shows ticklabels for 2nd coordinate (radius) ax1.axis["bottom"].get_helper().nth_coord_ticks = 1 fig.add_subplot(ax1) ax1.axis["lat"] = axis = grid_helper.new_floating_axis(0, 45, axes=ax1) axis.label.set_text("Test") axis.label.set_visible(True) axis.get_helper()._extremes = 2, 12 ax1.axis["lon"] = axis = grid_helper.new_floating_axis(1, 6, axes=ax1) axis.label.set_text("Test 2") axis.get_helper()._extremes = -180, 90 # A parasite axes with given transform ax2 = ParasiteAxesAuxTrans(ax1, tr, "equal") assert ax2.transData == tr + ax1.transData # Anything you draw in ax2 will match the ticks and grids of ax1. ax1.parasites.append(ax2) ax2.plot(np.linspace(0, 30, 50), np.linspace(10, 10, 50)) ax1.set_aspect(1.) ax1.set_xlim(-5, 12) ax1.set_ylim(-5, 10) ax1.grid(True)
def curvelinear_test2(fig): """ polar projection, but in a rectangular box. """ global ax1 import numpy as np import mpl_toolkits.axisartist.angle_helper as angle_helper from matplotlib.projections import PolarAxes from matplotlib.transforms import Affine2D from mpl_toolkits.axisartist import SubplotHost from mpl_toolkits.axisartist import GridHelperCurveLinear # see demo_curvelinear_grid.py for details tr = Affine2D().scale(np.pi/180., 1.) + PolarAxes.PolarTransform() extreme_finder = angle_helper.ExtremeFinderCycle(20, 20, lon_cycle = 360, lat_cycle = None, lon_minmax = None, lat_minmax = (0, np.inf), ) grid_locator1 = angle_helper.LocatorDMS(12) tick_formatter1 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1 ) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) fig.add_subplot(ax1) # Now creates floating axis #grid_helper = ax1.get_grid_helper() # floating axis whose first coordinate (theta) is fixed at 60 ax1.axis["lat"] = axis = ax1.new_floating_axis(0, 60) axis.label.set_text(r"$\theta = 60^{\circ}$") axis.label.set_visible(True) # floating axis whose second coordinate (r) is fixed at 6 ax1.axis["lon"] = axis = ax1.new_floating_axis(1, 6) axis.label.set_text(r"$r = 6$") ax1.set_aspect(1.) ax1.set_xlim(-5, 12) ax1.set_ylim(-5, 10) ax1.grid(True)
def curvelinear_test2(fig): """ Polar projection, but in a rectangular box. """ # PolarAxes.PolarTransform takes radian. However, we want our coordinate # system in degree tr = Affine2D().scale(np.pi/180, 1) + PolarAxes.PolarTransform() # Polar projection, which involves cycle, and also has limits in # its coordinates, needs a special method to find the extremes # (min, max of the coordinate within the view). extreme_finder = angle_helper.ExtremeFinderCycle( nx=20, ny=20, # Number of sampling points in each direction. lon_cycle=360, lat_cycle=None, lon_minmax=None, lat_minmax=(0, np.inf), ) # Find grid values appropriate for the coordinate (degree, minute, second). grid_locator1 = angle_helper.LocatorDMS(12) # Use an appropriate formatter. Note that the acceptable Locator and # Formatter classes are a bit different than that of Matplotlib, which # cannot directly be used here (this may be possible in the future). tick_formatter1 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear( tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1) ax1 = SubplotHost(fig, 1, 2, 2, grid_helper=grid_helper) # make ticklabels of right and top axis visible. ax1.axis["right"].major_ticklabels.set_visible(True) ax1.axis["top"].major_ticklabels.set_visible(True) # let right axis shows ticklabels for 1st coordinate (angle) ax1.axis["right"].get_helper().nth_coord_ticks = 0 # let bottom axis shows ticklabels for 2nd coordinate (radius) ax1.axis["bottom"].get_helper().nth_coord_ticks = 1 fig.add_subplot(ax1) ax1.set_aspect(1) ax1.set_xlim(-5, 12) ax1.set_ylim(-5, 10) ax1.grid(True, zorder=0) # A parasite axes with given transform ax2 = ParasiteAxesAuxTrans(ax1, tr, "equal") # note that ax2.transData == tr + ax1.transData # Anything you draw in ax2 will match the ticks and grids of ax1. ax1.parasites.append(ax2) ax2.plot(np.linspace(0, 30, 51), np.linspace(10, 10, 51), linewidth=2)
def curvelinear_test(fig): """Polar projection, but in a rectangular box. """ # 创建一个极坐标变换。PolarAxes.PolarTransform使用弧度,但本例 # 要设置的坐标系中角度的单位为度 tr = Affine2D().scale(np.pi / 180., 1.) + PolarAxes.PolarTransform() # 极坐标投影涉及到周期,在坐标上也有限制,需要一种特殊的方法来找到 # 坐标的最小值和最大值 extreme_finder = angle_helper.ExtremeFinderCycle( 20, 20, lon_cycle=360, lat_cycle=None, lon_minmax=None, lat_minmax=(0, np.inf), ) # 找到适合坐标的网格值(度、分、秒) grid_locator1 = angle_helper.LocatorDMS(12) # 使用适当的Formatter。请注意,可接受的Locator和Formatter类 # 与Matplotlib中的相应类稍有不同,后者目前还不能直接在这里使用 tick_formatter1 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) fig.add_subplot(ax1) # 创建浮动坐标轴 # 浮动坐标轴的第一个坐标(theta)指定为60度 ax1.axis["lat"] = axis = ax1.new_floating_axis(0, 60) axis.label.set_text(r"$\theta = 60^{\circ}$") axis.label.set_visible(True) # 浮动坐标轴的第二个坐标(r)指定为6 ax1.axis["lon"] = axis = ax1.new_floating_axis(1, 6) axis.label.set_text(r"$r = 6$") ax1.set_aspect(1.) ax1.set_xlim(-5, 12) ax1.set_ylim(-5, 10) ax1.grid(True)
def SemiPolarPlot(fig): # see demo_curvelinear_grid.py for details tr = Affine2D().scale(pi/180., 1.) + PolarAxes.PolarTransform() extreme_finder = angle_helper.ExtremeFinderCycle(20, 20, lon_cycle = 360, lat_cycle = None, lon_minmax = None, lat_minmax = (0, 1), ) grid_locator1 = angle_helper.LocatorDMS(11) grid_locator2 = FixedLocator([0.25, 0.5, 1., 0.75]) tick_formatter1 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, grid_locator2=grid_locator2, tick_formatter1=tick_formatter1, tick_formatter2=None ) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) fig.add_subplot(ax1) ax1.axis["top"].set_visible(False) ax1.axis["right"].set_visible(False) ax1.axis["bottom"].set_visible(False) ax1.axis["lon"] = ax1.new_floating_axis(1, 1) ax1.set_aspect(1) ax1.set_xlim(0, 2) ax1.set_ylim(-1., 1.) ax1.grid(True) curved_ax = ax1.get_aux_axes(tr) curved_ax.patch = ax1.patch # for aux_ax to have a clip path as in ax ax1.patch.zorder=0.9 return ax1, curved_ax
def createRLUAxes(self,figure=None,ids=[1, 1, 1],basex=None,basey=None): """Create a reciprocal lattice plot for a given DataSet object. Args: - Dataset (DataSet): DataSet object for which the RLU plot is to be made. Kwargs: - figure: Matplotlib figure in which the axis is to be put (default None) - ids (array): List of integer numbers provided to the SubplotHost ids attribute (default [1,1,1]) - basex (float): Ticks are positioned at multiples of this value along x (default None) - basey (float): Ticks are positioned at multiples of this value along y (default None) Returns: - ax (Matplotlib axes): Axes containing the RLU plot. .. note:: When rlu axis is created, the orientation of Qx and Qy is assumed to be rotated as well. This is to be done in the self.View3D method call! .. note:: When using python 2 the changing of tick marks is not supported due to limitations in matplotlib. However, if python 3 is used, the number of ticks and their location can be change after the initialization using the set_xticks_number, set_yticks_number chaning the wanted number of tick marks, or the set_xticks_base or set_yticks_base to change the base number, see RLU tutorial under Tools. As default a sufficient base number is found and will update when zooming. """ sample = copy.deepcopy(self.sample) for samp in sample: samp.convert = np.einsum('ij,j...->i...',samp.RotMat,samp.convert) #sample.convert = np.einsum('ij,j...->i...',sample.RotMat,sample.convert) samp.convertinv = np.linalg.inv(samp.convert) # Convert from Qx, Qy to projX, projY samp.orientationMatrix = np.dot(samp.RotMat3D,samp.orientationMatrix) samp.orientationMatrixINV = np.linalg.inv(samp.orientationMatrix) samp.theta = 0.0 if figure is None: fig = plt.figure(figsize=(7, 4)) else: fig = figure def calculateTicks(ticks,angle,round=True): val = ticks/np.tan(angle/2.0) if round: return np.array(np.round(val),dtype=int) else: return val if pythonVersion==3: # Only for python 3 if not basex is None or not basey is None: # Either basex or basey is provided (or both) if basex is None: basex = calculateTicks(basey,sample[0].projectionAngle,round=False) elif basey is None: basey = basex/calculateTicks(1.0,sample[0].projectionAngle,round=False) grid_locator1 = MultipleLocator(base=basex) grid_locator2 = MultipleLocator(base=basey) else: basex = 0.5 basey = 0.5 grid_locator1 = MultipleLocator(base=basex) grid_locator2 = MultipleLocator(base=basey) grid_helper = GridHelperCurveLinear((sample[0].inv_tr, sample[0].tr),grid_locator1=grid_locator1,grid_locator2=grid_locator2) else: # Python 2 grid_helper = GridHelperCurveLinear((sample[0].inv_tr, sample[0].tr)) ax = SubplotHost(fig, *ids, grid_helper=grid_helper) ax.sample = sample[0] if pythonVersion==3: # Only for python 3 ax.basex = basex ax.basey = basey def set_axis(ax,v1,v2,*args): if not args is (): points = np.concatenate([[v1,v2],[x for x in args]],axis=0) else: points = np.array([v1,v2]) if points.shape[1] == 3: points = ax.sample.calculateHKLtoProjection(points[:,0],points[:,1],points[:,2]).T boundaries = np.array([ax.sample.inv_tr(x[0],x[1]) for x in points]) ax.set_xlim(boundaries[:,0].min(),boundaries[:,0].max()) ax.set_ylim(boundaries[:,1].min(),boundaries[:,1].max()) if pythonVersion == 3: # Only possible in python 3 ax.forceGridUpdate() fig.add_subplot(ax) ax.set_aspect(1.) ax.grid(True, zorder=0) if not np.isclose(ax.sample.projectionAngle,np.pi/2.0,atol=0.001): ax.axis["top"].major_ticklabels.set_visible(True) ax.axis["right"].major_ticklabels.set_visible(True) ax.format_coord = ax.sample.format_coord ax.set_axis = lambda v1,v2,*args: set_axis(ax,v1,v2,*args) def beautifyLabel(vec): Vec = [x.astype(int) if np.isclose(x.astype(float)-x.astype(int),0.0) else x.astype(float) for x in vec] return '{} [RLU]'.format(', '.join([str(x) for x in Vec])) ax.set_xlabel(beautifyLabel(ax.sample.projectionVector1)) ax.set_ylabel(beautifyLabel(ax.sample.projectionVector2)) if pythonVersion==3: # Only for python 3 ax.calculateTicks = lambda value:calculateTicks(value,ax.sample.projectionAngle) ax.forceGridUpdate = lambda:forceGridUpdate(ax) ax._oldXlimDiff = np.diff(ax.get_xlim()) ax._oldYlimDiff = np.diff(ax.get_ylim()) ax.get_aspect_ratio = lambda: get_aspect(ax) ax.callbacks.connect('xlim_changed', axisChanged) ax.callbacks.connect('ylim_changed', axisChanged) ax.callbacks.connect('draw_event',lambda ax: axisChanged(ax,forceUpdate=True)) ax.axisChanged = lambda direction='both': axisChanged(ax,forceUpdate=True,direction=direction) @updateAxisDecorator(ax=ax,direction='x') def set_xticks_base(xBase,ax=ax): """Setter of the base x ticks to be used for plotting Args: - xBase (float): Base of the tick marks """ if not isinstance(ax._grid_helper.grid_finder.grid_locator1,MultipleLocator): l1 = MultipleLocator(base=xBase) ax._grid_helper.update_grid_finder(grid_locator1=l1) ax.xbase = xBase @updateAxisDecorator(ax=ax,direction='y') def set_yticks_base(yBase,ax=ax): """Setter of the base y ticks to be used for plotting Args: - yBase (float): Base of the tick marks """ if not isinstance(ax._grid_helper.grid_finder.grid_locator2,MultipleLocator): l2 = MultipleLocator(base=yBase) ax._grid_helper.update_grid_finder(grid_locator2=l2) ax.ybase = yBase @updateAxisDecorator(ax=ax,direction='x') def set_xticks_number(xNumber,ax=ax): """Setter of the number of x ticks to be used for plotting Args: - xNumber (int): Number of x tick marks """ if not isinstance(ax._grid_helper.grid_finder.grid_locator1,MaxNLocator): l1 = MaxNLocator(nbins=xNumber) ax._grid_helper.update_grid_finder(grid_locator1=l1) ax.xticks = xNumber @updateAxisDecorator(ax=ax,direction='y') def set_yticks_number(yNumber,ax=ax): """Setter of the number of y ticks to be used for plotting Args: - yNumber (int): Number of y tick marks """ if not isinstance(ax._grid_helper.grid_finder.grid_locator2,MaxNLocator): l2 = MaxNLocator(nbins=yNumber) ax._grid_helper.update_grid_finder(grid_locator2=l2) ax.yticks = yNumber ax.set_xticks_base = set_xticks_base ax.set_yticks_base = set_yticks_base ax.set_xticks_number = set_xticks_number ax.set_yticks_number = set_yticks_number return ax
def curvelinear_test2(fig): """ polar projection, but in a rectangular box. """ # PolarAxes.PolarTransform takes radian. However, we want our coordinate # system in degree tr = Affine2D().scale(np.pi / 180., 1.) + PolarAxes.PolarTransform() # polar projection, which involves cycle, and also has limits in # its coordinates, needs a special method to find the extremes # (min, max of the coordinate within the view). # 20, 20 : number of sampling points along x, y direction extreme_finder = angle_helper.ExtremeFinderCycle( 20, 20, lon_cycle=360, lat_cycle=None, lon_minmax=None, lat_minmax=(0, np.inf), ) grid_locator1 = angle_helper.LocatorDMS(12) # Find a grid values appropriate for the coordinate (degree, # minute, second). tick_formatter1 = angle_helper.FormatterDMS() # And also uses an appropriate formatter. Note that,the # acceptable Locator and Formatter class is a bit different than # that of mpl's, and you cannot directly use mpl's Locator and # Formatter here (but may be possible in the future). grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1) ax1 = SubplotHost(fig, 1, 2, 2, grid_helper=grid_helper) # make ticklabels of right and top axis visible. ax1.axis["right"].major_ticklabels.set_visible(True) ax1.axis["top"].major_ticklabels.set_visible(True) # let right axis shows ticklabels for 1st coordinate (angle) ax1.axis["right"].get_helper().nth_coord_ticks = 0 # let bottom axis shows ticklabels for 2nd coordinate (radius) ax1.axis["bottom"].get_helper().nth_coord_ticks = 1 fig.add_subplot(ax1) # A parasite axes with given transform ax2 = ParasiteAxesAuxTrans(ax1, tr, "equal") # note that ax2.transData == tr + ax1.transData # Anthing you draw in ax2 will match the ticks and grids of ax1. ax1.parasites.append(ax2) intp = cbook.simple_linear_interpolation ax2.plot(intp(np.array([0, 30]), 50), intp(np.array([10., 10.]), 50), linewidth=2.0) ax1.set_aspect(1.) ax1.set_xlim(-5, 12) ax1.set_ylim(-5, 10) ax1.grid(True, zorder=0)
def polar_stuff(fig, telescope): # PolarAxes.PolarTransform takes radian. However, we want our coordinate # system in degree tr = Affine2D().scale(np.pi / 180., 1.).translate( +np.pi / 2., 0) + PolarAxes.PolarTransform() # polar projection, which involves cycle, and also has limits in # its coordinates, needs a special method to find the extremes # (min, max of the coordinate within the view). # 20, 20 : number of sampling points along x, y direction n = 1 extreme_finder = angle_helper.ExtremeFinderCycle( n, n, lon_cycle=360, lat_cycle=None, lon_minmax=None, lat_minmax=(-90, 90), ) grid_locator1 = angle_helper.LocatorDMS(12) # Find a grid values appropriate for the coordinate (degree, # minute, second). tick_formatter1 = angle_helper.FormatterDMS() # And also uses an appropriate formatter. Note that,the # acceptable Locator and Formatter class is a bit different than # that of mpl's, and you cannot directly use mpl's Locator and # Formatter here (but may be possible in the future). grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) # make ticklabels of right and top axis visible. ax1.axis["right"].major_ticklabels.set_visible(True) ax1.axis["top"].major_ticklabels.set_visible(True) # let right axis shows ticklabels for 1st coordinate (angle) ax1.axis["right"].get_helper().nth_coord_ticks = 0 # let bottom axis shows ticklabels for 2nd coordinate (radius) ax1.axis["bottom"].get_helper().nth_coord_ticks = 1 fig.add_subplot(ax1) # A parasite axes with given transform ax2 = ParasiteAxesAuxTrans(ax1, tr, "equal") # note that ax2.transData == tr + ax1.transData # Anything you draw in ax2 will match the ticks and grids of ax1. ax1.parasites.append(ax2) # intp = cbook.simple_linear_interpolation #ax2.plot(intp(np.array([0, 30]), 50), # intp(np.array([10., 10.]), 50), # linewidth=2.0) x = np.rad2deg(telescope.az.value) * np.cos(telescope.alt.value) y = np.rad2deg(telescope.alt.value) circle = plt.Circle( (np.rad2deg(telescope.az.value - np.pi) * np.sin(telescope.alt.value), np.rad2deg(-telescope.alt.value * np.cos( (telescope.az.value - np.pi)))), radius=7.7 / 2, color="red", alpha=0.2, ) circle = plt.Circle( (x, y), radius=7.7 / 2, color="red", alpha=0.2, ) ax1.add_artist(circle) # point = ax1.scatter(x, y, c="b", s=20, zorder=10, transform=ax2.transData) ax2.annotate(1, (x, y), fontsize=15, xytext=(4, 4), textcoords='offset pixels') ax1.set_xlim(-180, 180) ax1.set_ylim(0, 90) ax1.set_aspect(1.) ax1.grid(True, zorder=0) ax1.set_xlabel("Azimuth in degrees", fontsize=20) ax1.set_ylabel("Zenith in degrees", fontsize=20) plt.show() return fig
class PolarPlot: ''' plots heading angle and signal strength in polar coor in 2d''' def __init__(self): plt.ion() self.fig = plt.figure(num=2, figsize=(10,7)) tr = Affine2D().scale(np.pi/180., 1.) + PolarAxes.PolarTransform() # 20, 20 : number of sampling points along x, y direction extreme_finder = angle_helper.ExtremeFinderCycle(50, 50, lon_cycle = 360, lat_cycle = None, lon_minmax = None, lat_minmax = (0, np.inf), ) grid_locator1 = angle_helper.LocatorDMS(15) tick_formatter1 = angle_helper.FormatterDMS() # And also uses an appropriate formatter. Note that,the # acceptable Locator and Formatter class is a bit different than # that of mpl's, and you cannot directly use mpl's Locator and # Formatter here (but may be possible in the future). grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1 ) self.ax1 = SubplotHost(self.fig, 1, 1, 1, grid_helper=grid_helper) # make ticklabels of right and top axis visible. self.ax1.axis["right"].major_ticklabels.set_visible(True) self.ax1.axis["top"].major_ticklabels.set_visible(True) self.ax1.axis["left"].major_ticklabels.set_visible(True) # let right axis shows ticklabels for 1st coordinate (angle) self.ax1.axis["right"].get_helper().nth_coord_ticks=0 # let bottom axis shows ticklabels for 1st coordinate (angle) self.ax1.axis["bottom"].get_helper().nth_coord_ticks=0 self.ax1.axis["left"].get_helper().nth_coord_ticks=0 temp = self.ax1.set_title('Signal strength & heading polar plots') temp.set_y(1.05) self.ax1.grid(True) # insert x and y axises self.ax = self.fig.add_subplot(self.ax1) self.ax1.spines['left'].set_position('center') self.ax1.spines['right'].set_color('red') self.ax1.spines['bottom'].set_position('center') self.ax1.spines['top'].set_color('none') self.ax1.spines['left'].set_smart_bounds(True) self.ax1.spines['bottom'].set_smart_bounds(True) self.ax1.xaxis.set_ticks_position('bottom') self.ax1.yaxis.set_ticks_position('left') self.ax1.axhline(linewidth=2, color='blue') self.ax1.axvline(linewidth=2, color='blue') # label x and y axises manually ticks = np.linspace(0, 255, 6) offset = np.zeros([1,255]) for i in range(1,5): self.ax1.annotate(str(ticks[i]),size=10, xy=(ticks[i], -15)) blah = self.ax1.plot(ticks[i],0, 'bo') self.ax1.annotate(str(ticks[i]),size=10, xy=(5, ticks[i])) blah = self.ax1.plot(0,ticks[i], 'bo') # annotate figure bbox_props = dict(boxstyle="round", fc="w", ec="0.5", alpha=0.9) # self.annotation = self.ax1.annotate('init',size=20, xy=(100, 100), bbox = bbox_props) self.annotation = plt.figtext(0.02, 0.9, 'rssi = ', size=20, alpha = 0.9, bbox = bbox_props) self.Freq = plt.figtext(0.85, 0.85, 'freq = ???', size=10, alpha = 0.9, bbox = bbox_props) self.Freq = plt.figtext(0.85, 0.9, 'Horizontal Plane', size=10, alpha = 0.9, bbox = bbox_props) # initialize arrow self.quiverLine = self.ax1.quiver(0,0,50,50,angles='xy',scale_units='xy',scale=1) self.ax1.set_aspect(1.) self.ax1.set_xlim(-255, 255) self.ax1.set_ylim(-255, 255) # initialize mesh plot self.xdata = [] self.ydata = [] self.polarline, = self.ax1.plot(self.xdata,self.ydata) def update(self, signalStrength, yaw): U = signalStrength*cos(yaw*pi/180) V = signalStrength*sin(yaw*pi/180) self.xdata.append(U) self.ydata.append(V) self.polarline.set_data(self.xdata,self.ydata) self.quiverLine.set_UVC(U,V) self.annotation.set_text('rssi = ' + str(signalStrength)) plt.draw()
def plotGsrResidue(theta, phi, residue, optTheta, optPhi, mvabTheta=None, mvabPhi=None, mvubTheta=None, mvubPhi=None): fig = figure() fig.clf() # some matplotlib setup stuff which I don't fully understand but it works tr = Affine2D().scale(pi / 180., 1.) + PolarAxes.PolarTransform() extreme_finder = angle_helper.ExtremeFinderCycle( 20, 20, lon_cycle=360, lat_cycle=None, lon_minmax=None, lat_minmax=(0, inf), ) grid_locator1 = angle_helper.LocatorDMS(12) tick_formatter1 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) fig.add_subplot(ax1) ax1.axis["right"].major_ticklabels.set_visible(True) ax1.axis["top"].major_ticklabels.set_visible(True) ax1.axis["right"].get_helper().nth_coord_ticks = 0 ax1.axis["bottom"].get_helper().nth_coord_ticks = 1 # draw the filled contoured map in polar coordinates ax1.contour(transpose(mat(theta)) * mat(cos(phi * pi / 180)), transpose(mat(theta)) * mat(sin(phi * pi / 180)), 1 / transpose(reshape(residue, (phi.size, -1))), 100, lw=0.1) cc = ax1.contourf( transpose(mat(theta)) * mat(cos(phi * pi / 180)), transpose(mat(theta)) * mat(sin(phi * pi / 180)), 1 / transpose(reshape(residue, (phi.size, -1))), 100) # remove gaps between the contour lines for c in cc.collections: c.set_antialiased(False) # show the MVAB direction if mvabTheta is not None and mvabPhi is not None: ax1.plot(mvabTheta * cos(mvabPhi * pi / 180), mvabTheta * sin(mvabPhi * pi / 180), 'sk', markersize=8) # show the MVUB direction if mvubTheta is not None and mvubPhi is not None: ax1.plot(mvubTheta * cos(mvubPhi * pi / 180), mvubTheta * sin(mvubPhi * pi / 180), 'dk', markersize=8) # show the optimal direction ax1.plot(optTheta * cos(optPhi * pi / 180), optTheta * sin(optPhi * pi / 180), '.k', markersize=15) # aspect and initial axes limits ax1.set_aspect(1.) ax1.set_xlim(-90, 90) ax1.set_ylim(-90, 90) # add grid ax1.grid(True) # add colobar cb = colorbar(cc, pad=0.07) cb.locator = MaxNLocator(14) cb.update_ticks() cb.set_label(r"$1/\tilde{\mathcal{R}}$") # save if toSave: savefig(resultsDir + '/eps/gsr_ResidualMap.eps', format='eps') savefig(resultsDir + '/png/gsr_ResidualMap.png', format='png')
def test_axis_direction(): fig = plt.figure(figsize=(5, 5)) # PolarAxes.PolarTransform takes radian. However, we want our coordinate # system in degree tr = Affine2D().scale(np.pi / 180., 1.) + PolarAxes.PolarTransform() # polar projection, which involves cycle, and also has limits in # its coordinates, needs a special method to find the extremes # (min, max of the coordinate within the view). # 20, 20 : number of sampling points along x, y direction extreme_finder = angle_helper.ExtremeFinderCycle( 20, 20, lon_cycle=360, lat_cycle=None, lon_minmax=None, lat_minmax=(0, np.inf), ) grid_locator1 = angle_helper.LocatorDMS(12) tick_formatter1 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) for axis in ax1.axis.values(): axis.set_visible(False) fig.add_subplot(ax1) ax1.axis["lat1"] = axis = grid_helper.new_floating_axis( 0, 130, axes=ax1, axis_direction="left") axis.label.set_text("Test") axis.label.set_visible(True) axis.get_helper()._extremes = 0.001, 10 ax1.axis["lat2"] = axis = grid_helper.new_floating_axis( 0, 50, axes=ax1, axis_direction="right") axis.label.set_text("Test") axis.label.set_visible(True) axis.get_helper()._extremes = 0.001, 10 ax1.axis["lon"] = axis = grid_helper.new_floating_axis( 1, 10, axes=ax1, axis_direction="bottom") axis.label.set_text("Test 2") axis.get_helper()._extremes = 50, 130 axis.major_ticklabels.set_axis_direction("top") axis.label.set_axis_direction("top") grid_helper.grid_finder.grid_locator1.den = 5 grid_helper.grid_finder.grid_locator2._nbins = 5 ax1.set_aspect(1.) ax1.set_xlim(-8, 8) ax1.set_ylim(-4, 12) ax1.grid(True)
def test_axis_direction(): fig = plt.figure(figsize=(5, 5)) # PolarAxes.PolarTransform takes radian. However, we want our coordinate # system in degree tr = Affine2D().scale(np.pi / 180., 1.) + PolarAxes.PolarTransform() # polar projection, which involves cycle, and also has limits in # its coordinates, needs a special method to find the extremes # (min, max of the coordinate within the view). # 20, 20 : number of sampling points along x, y direction extreme_finder = angle_helper.ExtremeFinderCycle(20, 20, lon_cycle=360, lat_cycle=None, lon_minmax=None, lat_minmax=(0, np.inf), ) grid_locator1 = angle_helper.LocatorDMS(12) tick_formatter1 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) for axis in ax1.axis.values(): axis.set_visible(False) fig.add_subplot(ax1) ax1.axis["lat1"] = axis = grid_helper.new_floating_axis( 0, 130, axes=ax1, axis_direction="left") axis.label.set_text("Test") axis.label.set_visible(True) axis.get_helper()._extremes = 0.001, 10 ax1.axis["lat2"] = axis = grid_helper.new_floating_axis( 0, 50, axes=ax1, axis_direction="right") axis.label.set_text("Test") axis.label.set_visible(True) axis.get_helper()._extremes = 0.001, 10 ax1.axis["lon"] = axis = grid_helper.new_floating_axis( 1, 10, axes=ax1, axis_direction="bottom") axis.label.set_text("Test 2") axis.get_helper()._extremes = 50, 130 axis.major_ticklabels.set_axis_direction("top") axis.label.set_axis_direction("top") grid_helper.grid_finder.grid_locator1.den = 5 grid_helper.grid_finder.grid_locator2._nbins = 5 ax1.set_aspect(1.) ax1.set_xlim(-8, 8) ax1.set_ylim(-4, 12) ax1.grid(True)
def test_custom_transform(): class MyTransform(Transform): input_dims = 2 output_dims = 2 is_separable = False def __init__(self, resolution): """ Resolution is the number of steps to interpolate between each input line segment to approximate its path in transformed space. """ Transform.__init__(self) self._resolution = resolution def transform(self, ll): x, y = ll.T return np.column_stack([x, y - x]) transform_non_affine = transform def transform_path(self, path): ipath = path.interpolated(self._resolution) return Path(self.transform(ipath.vertices), ipath.codes) transform_path_non_affine = transform_path def inverted(self): return MyTransformInv(self._resolution) class MyTransformInv(Transform): input_dims = 2 output_dims = 2 is_separable = False def __init__(self, resolution): Transform.__init__(self) self._resolution = resolution def transform(self, ll): x, y = ll.T return np.column_stack([x, y + x]) def inverted(self): return MyTransform(self._resolution) fig = plt.figure() SubplotHost = host_subplot_class_factory(Axes) tr = MyTransform(1) grid_helper = GridHelperCurveLinear(tr) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) fig.add_subplot(ax1) ax2 = ParasiteAxesAuxTrans(ax1, tr, "equal") ax1.parasites.append(ax2) ax2.plot([3, 6], [5.0, 10.]) ax1.set_aspect(1.) ax1.set_xlim(0, 10) ax1.set_ylim(0, 10) ax1.grid(True)
def get_smith(fig, rect=111, plot_impedance=True, plot_ticks=False, plot_admittance=False, plot_labels=False): '''Function which returns an axis with a blank smith chart, provide a figure and optional rect coords''' #Example use: # fig3 = plt.figure(3) # ax31 = pySmith.get_smith(fig3, 221) # ax31.plot(np.real(filtsmatrix[0,:,0,0]),np.imag(filtsmatrix[0,:,0,0])) # ax32= pySmith.get_smith(fig3, 222) # ax32.plot(np.real(filtsmatrix[0,:,0,1]),np.imag(filtsmatrix[0,:,0,1])) # ax33 = pySmith.get_smith(fig3, 223) # ax33.plot(np.real(filtsmatrix[0,:,1,0]),np.imag(filtsmatrix[0,:,1,0])) # ax34 = pySmith.get_smith(fig3, 224) # ax34.plot(np.real(filtsmatrix[0,:,1,1]),np.imag(filtsmatrix[0,:,1,1])) try: #font definition font = { 'family': 'sans-serif', 'color': 'black', 'weight': 'normal', 'size': 16, } #plot radial tick marks tr = PolarAxes.PolarTransform() num_thetas = 8 #*3 #12 gives in 30 deg intervals, 8 in 45 deg, 24 in 15deg thetas = np.linspace(0.0, math.pi * (1 - 2.0 / num_thetas), num_thetas // 2) angle_ticks = [] #(0, r"$0$"), for theta in thetas: angle_info = [] angle_info.append(theta) deg = int(round(180.0 * theta / math.pi)) angle_info.append(r'%d$^{\circ}$' % deg) angle_ticks.append(angle_info) grid_locator1 = FixedLocator([v for v, s in angle_ticks]) tick_formatter1 = DictFormatter(dict(angle_ticks)) thetas2 = np.linspace(math.pi, 2 * math.pi * (1 - 1.0 / num_thetas), num_thetas // 2) angle_ticks2 = [] #(0, r"$0$"), for theta in thetas2: angle_info = [] angle_info.append(theta) deg = int(round(180.0 * theta / math.pi)) angle_info.append(r'%d$^{\circ}$' % deg) angle_ticks2.append(angle_info) grid_locator2 = FixedLocator([v for v, s in angle_ticks2]) tick_formatter2 = DictFormatter(dict(angle_ticks2)) grid_helper1 = floating_axes.GridHelperCurveLinear( tr, extremes=(math.pi, 0, 1, 0), grid_locator1=grid_locator1, #grid_locator2=grid_locator2, tick_formatter1=tick_formatter1 #, #tick_formatter2=None, ) grid_helper2 = floating_axes.GridHelperCurveLinear( tr, extremes=(2 * math.pi, math.pi, 1, 0), grid_locator1=grid_locator2, #grid_locator2=grid_locator2, tick_formatter1=tick_formatter2 #, #tick_formatter2=None, ) r1 = int(math.floor(rect / 100)) r2 = int(math.floor((rect - 100 * r1) / 10)) r3 = int(math.floor((rect - 100 * r1 - 10 * r2))) ax = SubplotHost(fig, r1, r2, r3, grid_helper=grid_helper1) ax2 = SubplotHost(fig, r1, r2, r3, grid_helper=grid_helper2) #ax.set_aspect(math.pi/180.0,'datalim') fig.add_subplot(ax) fig.add_subplot(ax2) ax.axis["bottom"].major_ticklabels.set_axis_direction("top") ax.axis["bottom"].major_ticklabels.set_fontsize(13) ax.axis["left"].set_visible(False) ax.axis["left"].toggle(all=False) ax.axis["right"].set_visible(False) ax.axis["right"].toggle(all=False) ax.axis["top"].set_visible(False) ax.axis["top"].toggle(all=False) ax.patch.set_visible(False) ax2.axis["bottom"].major_ticklabels.set_fontsize(13) ax2.axis["left"].set_visible(False) ax2.axis["left"].toggle(all=False) ax2.axis["right"].set_visible(False) ax2.axis["right"].toggle(all=False) ax2.axis["top"].set_visible(False) ax2.axis["top"].toggle(all=False) #ax = fig.add_subplot(rect) #remove axis labels ax.axis('off') #set aspect ratio to 1 ax.set_aspect(1) #, 'datalim') #set limits ax.set_xlim([-1.02, 1.02]) ax.set_ylim([-1.02, 1.02]) #remove axis labels ax2.axis('off') #set aspect ratio to 1 ax2.set_aspect(1) #,'datalim') #set limits ax2.set_xlim([-1.02, 1.02]) ax2.set_ylim([-1.02, 1.02]) ax2.patch.set_visible(False) if plot_impedance: #make lines of constant resistance res_log = np.linspace(-4, 4, 9) react_log = np.linspace(-5, 5, 2001) res = 2**res_log react = 10**react_log react2 = np.append(-1.0 * react[::-1], np.array([0])) react = np.append(react2, react) for r in res: z = 1j * react + r gam = (z - 1) / (z + 1) x = np.real(gam) y = np.imag(gam) if abs(r - 1) > 1e-6: ax.plot(x, y, c='k', linewidth=0.75, alpha=0.25) else: ax.plot(x, y, c='k', linewidth=1.0, alpha=0.4) #make lines of constant reactance react_log = np.linspace(-3, 3, 7) res_log = np.linspace(-5, 5, 2001) res = 10**res_log react = 2**react_log react2 = np.append(-1.0 * react[::-1], np.array([0])) react = np.append(react2, react) for chi in react: z = 1j * chi + res gam = (z - 1) / (z + 1) x = np.real(gam) y = np.imag(gam) if abs(chi - 1) > 1e-6 and abs(chi + 1) > 1e-6 and abs(chi) > 1e-6: ax.plot(x, y, c='k', linewidth=0.75, alpha=0.25) else: ax.plot(x, y, c='k', linewidth=1.0, alpha=0.4) if plot_admittance: #make lines of constant conductance res_log = np.linspace(-4, 4, 9) react_log = np.linspace(-5, 5, 2001) res = 2**res_log react = 10**react_log react = np.append(-1.0 * react[::-1], react) for r in res: y = 1.0 / r + 1.0 / (1j * react) gam = (1.0 / y - 1) / (1.0 / y + 1) x = np.real(gam) y = np.imag(gam) if abs(r - 1) > 1e-6: ax.plot(x, y, c='k', linewidth=0.75, alpha=0.25) else: ax.plot(x, y, c='k', linewidth=1.0, alpha=0.4) #make lines of constant susceptance react_log = np.linspace(-3, 3, 7) res_log = np.linspace(-5, 5, 2001) res = 10**res_log react = 2**react_log react = np.append(-1.0 * react[::-1], react) for chi in react: y = 1.0 / (1j * chi) + 1.0 / res gam = (1.0 / y - 1) / (1.0 / y + 1) x = np.real(gam) y = np.imag(gam) if abs(chi - 1) > 1e-6 and abs(chi + 1) > 1e-6: ax.plot(x, y, c='k', linewidth=0.75, alpha=0.25) else: ax.plot(x, y, c='k', linewidth=1.0, alpha=0.4) y = 1.0 / res gam = (1.0 / y - 1) / (1.0 / y + 1) x = np.real(gam) y = np.imag(gam) ax.plot(x, y, c='k', linewidth=1.0, alpha=0.75) if plot_labels: #naive text placement only works for default python figure size with 1 subplot ax.text(-0.15, 1.04, r'$\Gamma$ = 1j', fontdict=font) ax.text(-1.4, -0.035, r'$\Gamma$ = -1', fontdict=font) ax.text(-0.17, -1.11, r'$\Gamma$ = -1j', fontdict=font) ax.text(1.04, -0.035, r'$\Gamma$ = 1', fontdict=font) if plot_ticks: num_minorticks = 3 num_thetas = num_thetas * (num_minorticks + 1) thetas = np.linspace(0, 2.0 * math.pi * (1.0 - 1.0 / num_thetas), num_thetas) r_inner = 0.985 r_outer = 1.0 rads = np.linspace(r_inner, r_outer, 2) ticknum = 0 for theta in thetas: x = rads * np.cos(theta) y = rads * np.sin(theta) if ticknum % (num_minorticks + 1) != 0: ax.plot(x, y, c='k', linewidth=1.0, alpha=1.0) ticknum = ticknum + 1 return ax except Exception as e: print('\nError in %s' % inspect.stack()[0][3]) print(e) exc_type, exc_obj, exc_tb = sys.exc_info() fname = os.path.split(exc_tb.tb_frame.f_code.co_filename)[1] print(exc_type, fname, exc_tb.tb_lineno)
def plotGsrResidue(theta, phi, residue, optTheta, optPhi, mvabTheta=None, mvabPhi=None, mvubTheta=None, mvubPhi=None): fig = figure() fig.clf() # some matplotlib setup stuff which I don't fully understand but it works tr = Affine2D().scale(pi/180., 1.) + PolarAxes.PolarTransform() extreme_finder = angle_helper.ExtremeFinderCycle(20, 20, lon_cycle = 360, lat_cycle = None, lon_minmax = None, lat_minmax = (0, inf), ) grid_locator1 = angle_helper.LocatorDMS(12) tick_formatter1 = angle_helper.FormatterDMS() grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1 ) ax1 = SubplotHost(fig, 1, 1, 1, grid_helper=grid_helper) fig.add_subplot(ax1) ax1.axis["right"].major_ticklabels.set_visible(True) ax1.axis["top"].major_ticklabels.set_visible(True) ax1.axis["right"].get_helper().nth_coord_ticks=0 ax1.axis["bottom"].get_helper().nth_coord_ticks=1 # draw the filled contoured map in polar coordinates ax1.contour(transpose(mat(theta))*mat(cos(phi*pi/180)), transpose(mat(theta))*mat(sin(phi*pi/180)), 1/transpose(reshape(residue, (phi.size,-1))), 100, lw=0.1) cc = ax1.contourf(transpose(mat(theta))*mat(cos(phi*pi/180)), transpose(mat(theta))*mat(sin(phi*pi/180)), 1/transpose(reshape(residue, (phi.size,-1))), 100) # remove gaps between the contour lines for c in cc.collections: c.set_antialiased(False) # show the MVAB direction if mvabTheta is not None and mvabPhi is not None: ax1.plot(mvabTheta*cos(mvabPhi*pi/180), mvabTheta*sin(mvabPhi*pi/180), 'sk', markersize=8) # show the MVUB direction if mvubTheta is not None and mvubPhi is not None: ax1.plot(mvubTheta*cos(mvubPhi*pi/180), mvubTheta*sin(mvubPhi*pi/180), 'dk', markersize=8) # show the optimal direction ax1.plot(optTheta*cos(optPhi*pi/180), optTheta*sin(optPhi*pi/180), '.k', markersize=15) # aspect and initial axes limits ax1.set_aspect(1.) ax1.set_xlim(-90, 90) ax1.set_ylim(-90, 90) # add grid ax1.grid(True) # add colobar cb = colorbar(cc, pad=0.07) cb.locator = MaxNLocator(14) cb.update_ticks() cb.set_label(r"$1/\tilde{\mathcal{R}}$") # save if toSave: savefig(resultsDir+'/eps/gsr_ResidualMap.eps', format='eps') savefig(resultsDir+'/png/gsr_ResidualMap.png', format='png')
def create_cg(st, fig=None, subplot=111): """ Helper function to create curvelinear grid The function makes use of the Matplotlib AXISARTIST namespace `mpl_toolkits.axisartist \ <https://matplotlib.org/mpl_toolkits/axes_grid/users/axisartist.html>`_. Here are some limitations to normal Matplotlib Axes. While using the Matplotlib `AxesGrid Toolkit \ <https://matplotlib.org/mpl_toolkits/axes_grid/index.html>`_ most of the limitations can be overcome. See `Matplotlib AxesGrid Toolkit User’s Guide \ <https://matplotlib.org/mpl_toolkits/axes_grid/users/index.html>`_. Parameters ---------- st : string scan type, 'PPI' or 'RHI' fig : matplotlib Figure object If given, the PPI will be plotted into this figure object. Axes are created as needed. If None a new figure object will be created or current figure will be used, depending on "subplot". subplot : :class:`matplotlib:matplotlib.gridspec.GridSpec`, \ matplotlib grid definition nrows/ncols/plotnumber, see examples section defaults to '111', only one subplot Returns ------- cgax : matplotlib toolkit axisartist Axes object curvelinear Axes (r-theta-grid) caax : matplotlib Axes object (twin to cgax) Cartesian Axes (x-y-grid) for plotting cartesian data paax : matplotlib Axes object (parasite to cgax) The parasite axes object for plotting polar data """ if st == 'RHI': # create transformation tr = Affine2D().scale(np.pi / 180, 1) + PolarAxes.PolarTransform() # build up curvelinear grid extreme_finder = ah.ExtremeFinderCycle(20, 20, lon_cycle=100, lat_cycle=None, lon_minmax=(0, np.inf), lat_minmax=(0, np.inf), ) # locator and formatter for angular annotation grid_locator1 = ah.LocatorDMS(10.) tick_formatter1 = ah.FormatterDMS() # grid_helper for curvelinear grid grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, grid_locator2=None, tick_formatter1=tick_formatter1, tick_formatter2=None, ) # try to set nice locations for range gridlines grid_helper.grid_finder.grid_locator2._nbins = 30.0 grid_helper.grid_finder.grid_locator2._steps = [0, 1, 1.5, 2, 2.5, 5, 10] if st == 'PPI': # Set theta start to north tr_rotate = Affine2D().translate(-90, 0) # set theta running clockwise tr_scale = Affine2D().scale(-np.pi / 180, 1) # create transformation tr = tr_rotate + tr_scale + PolarAxes.PolarTransform() # build up curvelinear grid extreme_finder = ah.ExtremeFinderCycle(20, 20, lon_cycle=360, lat_cycle=None, lon_minmax=(360, 0), lat_minmax=(0, np.inf), ) # locator and formatter for angle annotation locs = [i for i in np.arange(0., 359., 10.)] grid_locator1 = FixedLocator(locs) tick_formatter1 = DictFormatter(dict([(i, r"${0:.0f}^\circ$".format(i)) for i in locs])) # grid_helper for curvelinear grid grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, grid_locator2=None, tick_formatter1=tick_formatter1, tick_formatter2=None, ) # try to set nice locations for range gridlines grid_helper.grid_finder.grid_locator2._nbins = 15.0 grid_helper.grid_finder.grid_locator2._steps = [0, 1, 1.5, 2, 2.5, 5, 10] # if there is no figure object given if fig is None: # create new figure if there is only one subplot if subplot is 111: fig = pl.figure() # otherwise get current figure or create new figure else: fig = pl.gcf() # generate Axis cgax = SubplotHost(fig, subplot, grid_helper=grid_helper) fig.add_axes(cgax) # PPIs always plottetd with equal aspect if st == 'PPI': cgax.set_aspect('equal', adjustable='box') # get twin axis for cartesian grid caax = cgax.twin() # move axis annotation from right to left and top to bottom for # cartesian axis caax.toggle_axisline() # make right and top axis visible and show ticklabels (curvelinear axis) cgax.axis["top", "right"].set_visible(True) cgax.axis["top", "right"].major_ticklabels.set_visible(True) # make ticklabels of left and bottom axis invisible (curvelinear axis) cgax.axis["left", "bottom"].major_ticklabels.set_visible(False) # and also set tickmarklength to zero for better presentation # (curvelinear axis) cgax.axis["top", "right", "left", "bottom"].major_ticks.set_ticksize(0) # show theta (angles) on top and right axis cgax.axis["top"].get_helper().nth_coord_ticks = 0 cgax.axis["right"].get_helper().nth_coord_ticks = 0 # generate and add parasite axes with given transform paax = ParasiteAxesAuxTrans(cgax, tr, "equal") # note that paax.transData == tr + cgax.transData # Anything you draw in paax will match the ticks and grids of cgax. cgax.parasites.append(paax) return cgax, caax, paax
def curvelinear_test2(fig): """ polar projection, but in a rectangular box. """ # PolarAxes.PolarTransform takes radian. However, we want our coordinate # system in degree tr = Affine2D().scale(np.pi/180., 1.) + PolarAxes.PolarTransform() # polar projection, which involves cycle, and also has limits in # its coordinates, needs a special method to find the extremes # (min, max of the coordinate within the view). # 20, 20 : number of sampling points along x, y direction extreme_finder = angle_helper.ExtremeFinderCycle(20, 20, lon_cycle=360, lat_cycle=None, lon_minmax=None, lat_minmax=(0, np.inf), ) grid_locator1 = angle_helper.LocatorDMS(12) # Find a grid values appropriate for the coordinate (degree, # minute, second). tick_formatter1 = angle_helper.FormatterDMS() # And also uses an appropriate formatter. Note that,the # acceptable Locator and Formatter class is a bit different than # that of mpl's, and you cannot directly use mpl's Locator and # Formatter here (but may be possible in the future). grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, tick_formatter1=tick_formatter1 ) ax1 = SubplotHost(fig, 1, 2, 2, grid_helper=grid_helper) # make ticklabels of right and top axis visible. ax1.axis["right"].major_ticklabels.set_visible(True) ax1.axis["top"].major_ticklabels.set_visible(True) # let right axis shows ticklabels for 1st coordinate (angle) ax1.axis["right"].get_helper().nth_coord_ticks = 0 # let bottom axis shows ticklabels for 2nd coordinate (radius) ax1.axis["bottom"].get_helper().nth_coord_ticks = 1 fig.add_subplot(ax1) # A parasite axes with given transform ax2 = ParasiteAxesAuxTrans(ax1, tr, "equal") # note that ax2.transData == tr + ax1.transData # Anything you draw in ax2 will match the ticks and grids of ax1. ax1.parasites.append(ax2) intp = cbook.simple_linear_interpolation ax2.plot(intp(np.array([0, 30]), 50), intp(np.array([10., 10.]), 50), linewidth=2.0) ax1.set_aspect(1.) ax1.set_xlim(-5, 12) ax1.set_ylim(-5, 10) ax1.grid(True, zorder=0)
def create_cg(st, fig=None, subplot=111): """ Helper function to create curvelinear grid The function makes use of the Matplotlib AXISARTIST namespace `mpl_toolkits.axisartist \ <https://matplotlib.org/mpl_toolkits/axes_grid/users/axisartist.html>`_. Here are some limitations to normal Matplotlib Axes. While using the Matplotlib `AxesGrid Toolkit \ <https://matplotlib.org/mpl_toolkits/axes_grid/index.html>`_ most of the limitations can be overcome. See `Matplotlib AxesGrid Toolkit User’s Guide \ <https://matplotlib.org/mpl_toolkits/axes_grid/users/index.html>`_. Parameters ---------- st : string scan type, 'PPI' or 'RHI' fig : matplotlib Figure object If given, the PPI will be plotted into this figure object. Axes are created as needed. If None a new figure object will be created or current figure will be used, depending on "subplot". subplot : :class:`matplotlib:matplotlib.gridspec.GridSpec`, \ matplotlib grid definition nrows/ncols/plotnumber, see examples section defaults to '111', only one subplot Returns ------- cgax : matplotlib toolkit axisartist Axes object curvelinear Axes (r-theta-grid) caax : matplotlib Axes object (twin to cgax) Cartesian Axes (x-y-grid) for plotting cartesian data paax : matplotlib Axes object (parasite to cgax) The parasite axes object for plotting polar data """ if st == 'RHI': # create transformation tr = Affine2D().scale(np.pi / 180, 1) + PolarAxes.PolarTransform() # build up curvelinear grid extreme_finder = ah.ExtremeFinderCycle(20, 20, lon_cycle=100, lat_cycle=None, lon_minmax=(0, np.inf), lat_minmax=(0, np.inf), ) # locator and formatter for angular annotation grid_locator1 = ah.LocatorDMS(10.) tick_formatter1 = ah.FormatterDMS() # grid_helper for curvelinear grid grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, grid_locator2=None, tick_formatter1=tick_formatter1, tick_formatter2=None, ) # try to set nice locations for range gridlines grid_helper.grid_finder.grid_locator2._nbins = 30.0 grid_helper.grid_finder.grid_locator2._steps = [0, 1, 1.5, 2, 2.5, 5, 10] if st == 'PPI': # Set theta start to north tr_rotate = Affine2D().translate(-90, 0) # set theta running clockwise tr_scale = Affine2D().scale(-np.pi / 180, 1) # create transformation tr = tr_rotate + tr_scale + PolarAxes.PolarTransform() # build up curvelinear grid extreme_finder = ah.ExtremeFinderCycle(20, 20, lon_cycle=360, lat_cycle=None, lon_minmax=(360, 0), lat_minmax=(0, np.inf), ) # locator and formatter for angle annotation locs = [i for i in np.arange(0., 359., 10.)] grid_locator1 = FixedLocator(locs) tick_formatter1 = DictFormatter(dict([(i, r"${0:.0f}^\circ$".format(i)) for i in locs])) # grid_helper for curvelinear grid grid_helper = GridHelperCurveLinear(tr, extreme_finder=extreme_finder, grid_locator1=grid_locator1, grid_locator2=None, tick_formatter1=tick_formatter1, tick_formatter2=None, ) # try to set nice locations for range gridlines grid_helper.grid_finder.grid_locator2._nbins = 15.0 grid_helper.grid_finder.grid_locator2._steps = [0, 1, 1.5, 2, 2.5, 5, 10] # if there is no figure object given if fig is None: # create new figure if there is only one subplot if subplot is 111: fig = pl.figure() # otherwise get current figure or create new figure else: fig = pl.gcf() # generate Axis cgax = SubplotHost(fig, subplot, grid_helper=grid_helper) fig.add_axes(cgax) # PPIs always plottetd with equal aspect if st == 'PPI': cgax.set_aspect('equal', adjustable='box') # get twin axis for cartesian grid caax = cgax.twin() # move axis annotation from right to left and top to bottom caax.toggle_axisline() # make ticklabels of right and top axis visible, cgax.axis["right"].major_ticklabels.set_visible(True) cgax.axis["top"].major_ticklabels.set_visible(True) cgax.axis["right"].get_helper().nth_coord_ticks = 0 cgax.axis["top"].get_helper().nth_coord_ticks = 0 # and also set tickmarklength to zero for better presentation cgax.axis["right"].major_ticks.set_ticksize(0) cgax.axis["top"].major_ticks.set_ticksize(0) # make ticklabels of left and bottom axis invisible, # because we are drawing them cgax.axis["left"].major_ticklabels.set_visible(False) cgax.axis["bottom"].major_ticklabels.set_visible(False) # and also set tickmarklength to zero for better presentation cgax.axis["left"].major_ticks.set_ticksize(0) cgax.axis["bottom"].major_ticks.set_ticksize(0) # generate and add parasite axes with given transform paax = ParasiteAxesAuxTrans(cgax, tr, "equal") # note that paax.transData == tr + cgax.transData # Anything you draw in paax will match the ticks and grids of cgax. cgax.parasites.append(paax) return cgax, caax, paax