def test_str_list(self):
from msa import msa, simplify
self.assertEqual(simplify(msa([['A', 'B', 'C', 'D', 'E'],
['x', 'B', 'C', 'D', 'E'],
['x', 'y', 'B', 'C', 'z', 'E'],
['A', 'B', 'C', 'x', 'y', 'z', 'D']])),
simplify(msa(['ABCDE',
'xBCDE',
'xyBCzE',
'ABCxyzD'])))
def test_str_list(self):
from msa import msa, simplify
self.assertEqual(
simplify(
msa(
[
["A", "B", "C", "D", "E"],
["x", "B", "C", "D", "E"],
["x", "y", "B", "C", "z", "E"],
["A", "B", "C", "x", "y", "z", "D"],
]
)
),
simplify(msa(["ABCDE", "xBCDE", "xyBCzE", "ABCxyzD"])),
)
def test_disjunct_simplify_empty(self):
from msa import simplify, Disjunct as d
self.assertEqual(['1', d('2', ()), '3'],
simplify(['1', d('2', ()), '3']))
def test_disjunct_simplify_empty(self):
from msa import simplify, Disjunct as d
self.assertEqual(["1", d("2", ()), "3"], simplify(["1", d("2", ()), "3"]))
