def test_some(self):
a = 1
b = np.array([3.14159265, 3.1415])
c = [1, '1', 2.3, '5 8']
d = set([1, '2', 'spam'])
objs = [a, b, b, b, c, b, a, d, b, b, a, d, d, d, c, d, b, d, c, a]
targ = [a, b, c, d]
res = unique_objs(objs)
self.assertEqual(targ, res)
def data_children_recur(self):
'''
All data child objects stored in the current object,
obtained recursively.
'''
# subclassing this to remove duplicate objects such as SpikeTrain
# objects in both Segment and Unit
# Only Block can have duplicate items right now, so implement
# this here for performance reasons.
return tuple(unique_objs(super().data_children_recur))
def test_some(self):
a = 1
b = np.array([3.14159265, 3.1415])
c = [1, '1', 2.3, '5 8']
d = set([1, '2', 'spam'])
objs = [a, b, b, b, c, b, a, d, b, b, a, d, d, d, c, d, b, d, c, a]
targ = [a, b, c, d]
res = unique_objs(objs)
self.assertEqual(targ, res)
def data_children_recur(self):
'''
All data child objects stored in the current object,
obtained recursively.
'''
# subclassing this to remove duplicate objects such as SpikeTrain
# objects in both Segment and Unit
# Only Block can have duplicate items right now, so implement
# this here for performance reasons.
return tuple(unique_objs(super(Block, self).data_children_recur))
def list_children_by_class(self, cls):
'''
List all children of a particular class recursively.
You can either provide a class object, a class name,
or the name of the container storing the class.
'''
# subclassing this to remove duplicate objects such as SpikeTrain
# objects in both Segment and Unit
# Only Block can have duplicate items right now, so implement
# this here for performance reasons.
return unique_objs(super().list_children_by_class(cls))
def list_children_by_class(self, cls):
'''
List all children of a particular class recursively.
You can either provide a class object, a class name,
or the name of the container storing the class.
'''
# subclassing this to remove duplicate objects such as SpikeTrain
# objects in both Segment and Unit
# Only Block can have duplicate items right now, so implement
# this here for performance reasons.
return unique_objs(super(Block, self).list_children_by_class(cls))
def _get_all_objs(container, class_name):
"""
Get all Neo objects of a given type from a container.
The objects can be any list, dict, or other iterable or mapping containing
Neo objects of a particular class, as well as any Neo object that can hold
the object.
Objects are searched recursively, so the objects can be nested (such as a
list of blocks).
Parameters
----------
container : list, tuple, iterable, dict, neo.Container
The container for the Neo objects.
class_name : str
The name of the class, with proper capitalization
(i.e., 'SpikeTrain', not 'Spiketrain' or 'spiketrain').
Returns
-------
list
A list of unique Neo objects.
Raises
------
ValueError
If can not handle containers of the type passed in `container`.
"""
if container.__class__.__name__ == class_name:
return [container]
classholder = class_name.lower() + 's'
if hasattr(container, classholder):
vals = getattr(container, classholder)
elif hasattr(container, 'list_children_by_class'):
vals = container.list_children_by_class(class_name)
elif hasattr(container, 'values') and not hasattr(container, 'ndim'):
vals = container.values()
elif hasattr(container, '__iter__') and not hasattr(container, 'ndim'):
vals = container
else:
raise ValueError('Cannot handle object of type %s' % type(container))
res = list(chain.from_iterable(_get_all_objs(obj, class_name)
for obj in vals))
return unique_objs(res)
def _get_all_objs(container, classname):
"""Get all `neo` objects of a given type from a container.
The objects can be any list, dict, or other iterable or mapping containing
neo objects of a particular class, as well as any neo object that can hold
the object.
Objects are searched recursively, so the objects can be nested (such as a
list of blocks).
Parameters
----------
container : list, tuple, iterable, dict, neo container
The container for the neo objects.
classname : str
The name of the class, with proper capitalization
(so `SpikeTrain`, not `Spiketrain` or `spiketrain`)
Returns
-------
list
A list of unique `neo` objects
"""
if container.__class__.__name__ == classname:
return [container]
classholder = classname.lower() + 's'
if hasattr(container, classholder):
vals = getattr(container, classholder)
elif hasattr(container, 'list_children_by_class'):
vals = container.list_children_by_class(classname)
elif hasattr(container, 'values') and not hasattr(container, 'ndim'):
vals = container.values()
elif hasattr(container, '__iter__'):
vals = container
else:
raise ValueError('Cannot handle object of type %s' % type(container))
res = list(chain.from_iterable(_get_all_objs(obj, classname)
for obj in vals))
return unique_objs(res)