def _fill_parts(self):
pkg_man = self._specs['pkg_manager']
for item in self._specs['instructions']:
instruction, params = item
if instruction in self._implementations.keys():
impl = self._implementations[instruction]
if impl in _installation_implementations.values():
interface = impl(pkg_manager=pkg_man, **params)
if interface.env:
_this_env = interface.render_env()
if _this_env is not None:
self._environment.update(**_this_env)
if interface.run:
self._post.append(interface.render_run())
else:
if instruction == 'install':
impl(params, pkg_manager=pkg_man)
else:
impl(params)
else:
raise ValueError(
"instruction not understood: '{}'".format(instruction))
if not self._runscript:
self._runscript.append(NEURODOCKER_ENTRYPOINT)
self._parts_filled = True
def _fill_parts(self):
pkg_man = self._specs['pkg_manager']
for item in self._specs['instructions']:
instruction, params = item
if instruction in self._implementations.keys():
impl = self._implementations[instruction]
if impl in _installation_implementations.values():
try:
interface = impl(pkg_manager=pkg_man, **params)
except Exception as exc:
logger.error("Failed to instantiate {}: {}".format(
impl, exc))
raise
if interface.env:
_this_env = interface.render_env()
if _this_env is not None:
self._environment.extend(_this_env.items())
if interface.run:
self._post.append(interface.render_run())
else:
if instruction == 'install':
impl(params, pkg_manager=pkg_man)
else:
impl(params)
else:
raise ValueError(
"instruction not understood: '{}'".format(instruction))
if not self._runscript:
self._runscript = NEURODOCKER_ENTRYPOINT
self._parts_filled = True
def _ispecs_to_dockerfile_str(self):
pkg_man = self._specs['pkg_manager']
for item in self._specs['instructions']:
instruction, params = item
if instruction in self._implementations.keys():
impl = self._implementations[instruction]
if impl in _installation_implementations.values():
interface = impl(pkg_manager=pkg_man, **params)
yield _DockerfileInterfaceFormatter(interface).render()
else:
if instruction == 'install':
yield impl(params, pkg_manager=pkg_man)
else:
yield impl(params)
else:
raise ValueError(
"instruction not understood: '{}'".format(instruction))
def _ispecs_to_dockerfile_str(self):
pkg_man = self._specs["pkg_manager"]
for item in self._specs["instructions"]:
instruction, params = item
if instruction in self._implementations.keys():
impl = self._implementations[instruction]
if impl in _installation_implementations.values():
try:
interface = impl(pkg_manager=pkg_man, **params)
except Exception as exc:
logger.error("Failed to instantiate {}: {}".format(impl, exc))
raise
yield _DockerfileInterfaceFormatter(interface).render()
else:
if instruction == "install":
yield impl(params, pkg_manager=pkg_man)
else:
yield impl(params)
else:
raise ValueError("instruction not understood: '{}'".format(instruction))