Python bam_innerdist示例

示例#1

文件： test_innerdist.py 项目： xuwei684/ngsutils

    def testError(self):
        failed = False
        try:
            bam_innerdist(testbam3, testbam4)
        except ValueError:
            failed = True

        self.assertTrue(failed)

示例#2

文件： test_innerdist.py 项目： ZhangQiuxue/ngsutils

    def testError(self):
        failed = False
        try:
            bam_innerdist(testbam3, testbam4)
        except ValueError:
            failed = True

        self.assertTrue(failed)

示例#3

文件： test_innerdist.py 项目： xuwei684/ngsutils

    def testDist(self):
        total, proper, mean, stdev, o_count = bam_innerdist(testbam1, testbam2)

        self.assertEqual(total, 6)
        self.assertEqual(proper, 4)
        self.assertEqual(mean, 75.0)
        self.assertEqual(round(stdev, 5), 28.86751)

示例#4

文件： test_innerdist.py 项目： ZhangQiuxue/ngsutils

    def testDist(self):
        total, proper, mean, stdev, o_count = bam_innerdist(testbam1, testbam2)

        self.assertEqual(total, 6)
        self.assertEqual(proper, 4)
        self.assertEqual(mean, 75.0)
        self.assertEqual(round(stdev, 5), 28.86751)