def test_fetch_atlas_basc_multiscale_2015():
# default version='sym'
data_sym = atlas.fetch_atlas_basc_multiscale_2015(data_dir=tst.tmpdir,
verbose=0)
# version='asym'
data_asym = atlas.fetch_atlas_basc_multiscale_2015(version='asym',
verbose=0,
data_dir=tst.tmpdir)
keys = [
'scale007', 'scale012', 'scale020', 'scale036', 'scale064', 'scale122',
'scale197', 'scale325', 'scale444'
]
dataset_name = 'basc_multiscale_2015'
name_sym = 'template_cambridge_basc_multiscale_nii_sym'
basenames_sym = [
'template_cambridge_basc_multiscale_sym_' + key + '.nii.gz'
for key in keys
]
for key, basename_sym in zip(keys, basenames_sym):
assert_equal(
data_sym[key],
os.path.join(tst.tmpdir, dataset_name, name_sym, basename_sym))
name_asym = 'template_cambridge_basc_multiscale_nii_asym'
basenames_asym = [
'template_cambridge_basc_multiscale_asym_' + key + '.nii.gz'
for key in keys
]
for key, basename_asym in zip(keys, basenames_asym):
assert_equal(
data_asym[key],
os.path.join(tst.tmpdir, dataset_name, name_asym, basename_asym))
assert_equal(len(data_sym), 10)
assert_raises_regex(ValueError,
'The version of Brain parcellations requested "aym"',
atlas.fetch_atlas_basc_multiscale_2015,
version="aym",
data_dir=tst.tmpdir,
verbose=0)
assert_equal(len(tst.mock_url_request.urls), 2)
assert_not_equal(data_sym.description, '')
assert_not_equal(data_asym.description, '')
def test_fetch_atlas_basc_multiscale_2015(tmp_path, request_mocker):
# default version='sym',
data_sym = atlas.fetch_atlas_basc_multiscale_2015(data_dir=str(tmp_path),
verbose=0)
# version='asym'
data_asym = atlas.fetch_atlas_basc_multiscale_2015(version='asym',
verbose=0,
data_dir=str(tmp_path))
keys = [
'scale007', 'scale012', 'scale020', 'scale036', 'scale064', 'scale122',
'scale197', 'scale325', 'scale444'
]
dataset_name = 'basc_multiscale_2015'
name_sym = 'template_cambridge_basc_multiscale_nii_sym'
basenames_sym = [
'template_cambridge_basc_multiscale_sym_' + key + '.nii.gz'
for key in keys
]
for key, basename_sym in zip(keys, basenames_sym):
assert data_sym[key] == str(tmp_path / dataset_name / name_sym /
basename_sym)
name_asym = 'template_cambridge_basc_multiscale_nii_asym'
basenames_asym = [
'template_cambridge_basc_multiscale_asym_' + key + '.nii.gz'
for key in keys
]
for key, basename_asym in zip(keys, basenames_asym):
assert data_asym[key] == str(tmp_path / dataset_name / name_asym /
basename_asym)
assert len(data_sym) == 10
with pytest.raises(
ValueError,
match='The version of Brain parcellations requested "aym"'):
atlas.fetch_atlas_basc_multiscale_2015(version="aym",
data_dir=str(tmp_path),
verbose=0)
assert request_mocker.url_count == 2
assert data_sym.description != ''
assert data_asym.description != ''
def test_fetch_atlas_basc_multiscale_2015():
# default version='sym'
data_sym = atlas.fetch_atlas_basc_multiscale_2015(data_dir=tst.tmpdir,
verbose=0)
# version='asym'
data_asym = atlas.fetch_atlas_basc_multiscale_2015(version='asym',
verbose=0,
data_dir=tst.tmpdir)
keys = ['scale007', 'scale012', 'scale020', 'scale036', 'scale064',
'scale122', 'scale197', 'scale325', 'scale444']
dataset_name = 'basc_multiscale_2015'
name_sym = 'template_cambridge_basc_multiscale_nii_sym'
basenames_sym = ['template_cambridge_basc_multiscale_sym_' +
key + '.nii.gz' for key in keys]
for key, basename_sym in zip(keys, basenames_sym):
assert_equal(data_sym[key], os.path.join(tst.tmpdir, dataset_name,
name_sym, basename_sym))
name_asym = 'template_cambridge_basc_multiscale_nii_asym'
basenames_asym = ['template_cambridge_basc_multiscale_asym_' +
key + '.nii.gz' for key in keys]
for key, basename_asym in zip(keys, basenames_asym):
assert_equal(data_asym[key], os.path.join(tst.tmpdir, dataset_name,
name_asym, basename_asym))
assert_equal(len(data_sym), 10)
assert_raises_regex(ValueError,
'The version of Brain parcellations requested "aym"',
atlas.fetch_atlas_basc_multiscale_2015, version="aym",
data_dir=tst.tmpdir, verbose=0)
assert_equal(len(tst.mock_url_request.urls), 2)
assert_not_equal(data_sym.description, '')
assert_not_equal(data_asym.description, '')
