def test_MRConvert_outputs():
output_map = dict(converted=dict(), )
outputs = MRConvert.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_MRConvert_inputs():
input_map = dict(out_filename=dict(position=-1,
genfile=True,
argstr='%s',
),
ignore_exception=dict(nohash=True,
usedefault=True,
),
layout=dict(position=2,
argstr='-output %s',
),
extension=dict(position=2,
usedefault=True,
),
extract_at_coordinate=dict(argstr='%s',
sep=',',
position=2,
),
offset_bias=dict(units='mm',
position=3,
argstr='-scale %d',
),
resample=dict(units='mm',
position=3,
argstr='-scale %d',
),
args=dict(argstr='%s',
),
terminal_output=dict(mandatory=True,
nohash=True,
),
environ=dict(nohash=True,
usedefault=True,
),
in_file=dict(position=-2,
mandatory=True,
argstr='%s',
),
prs=dict(position=3,
argstr='-prs',
),
extract_at_axis=dict(position=1,
argstr='-coord %s',
),
replace_NaN_with_zero=dict(position=3,
argstr='-zero',
),
voxel_dims=dict(argstr='-vox %s',
sep=',',
position=3,
),
output_datatype=dict(position=2,
argstr='-output %s',
),
)
inputs = MRConvert.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_MRConvert_inputs():
input_map = dict(args=dict(argstr='%s',
),
environ=dict(nohash=True,
usedefault=True,
),
extension=dict(position=2,
usedefault=True,
),
extract_at_axis=dict(argstr='-coord %s',
position=1,
),
extract_at_coordinate=dict(argstr='%s',
position=2,
sep=',',
),
ignore_exception=dict(nohash=True,
usedefault=True,
),
in_file=dict(argstr='%s',
mandatory=True,
position=-2,
),
layout=dict(argstr='-output %s',
position=2,
),
offset_bias=dict(argstr='-scale %d',
position=3,
units='mm',
),
out_filename=dict(argstr='%s',
genfile=True,
position=-1,
),
output_datatype=dict(argstr='-output %s',
position=2,
),
prs=dict(argstr='-prs',
position=3,
),
replace_NaN_with_zero=dict(argstr='-zero',
position=3,
),
resample=dict(argstr='-scale %d',
position=3,
units='mm',
),
terminal_output=dict(mandatory=True,
nohash=True,
),
voxel_dims=dict(argstr='-vox %s',
position=3,
sep=',',
),
)
inputs = MRConvert.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_MRConvert_outputs():
output_map = dict(converted=dict(),
)
outputs = MRConvert.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value