def test_region_string(self): record = next(vcf.Reader(self.vcf_file)) variant = Variant.from_pyvcf(record, None) self.assertIsNotNone(variant) self.assertEqual(variant.region_string(flank=1), "1:4999478-4999733")
def test_region_string(self): record = next(vcf.Reader(self.vcf_file)) variant = Variant.from_pyvcf(record, None) with self.assertRaises(ValueError): variant.region_string() self.assertEqual(variant.region_string(flank=1), "1:931634-931635")