def setUp(self):
Robot.reset()
self.robot = Robot.get_instance()
# self.robot.connect(port='/dev/tty.usbmodem1421')
# self.robot.home()
self.trash = containers.load('point', 'A1', 'trash')
self.tiprack = containers.load('tiprack-200ul', 'B2', 'p200-rack')
self.trough = containers.load('trough-12row', 'B2', 'trough')
self.plate = containers.load('96-flat', 'A2', 'magbead')
self.p200 = instruments.Pipette(
name="p200",
trash_container=self.trash,
tip_racks=[self.tiprack],
min_volume=10, # These are variable
axis="b",
channels=1)
self.p1000 = instruments.Pipette(
name="p1000",
trash_container=self.trash,
tip_racks=[self.tiprack],
min_volume=100, # These are variable
axis="a",
channels=1)
def setUp(self):
self.robot = Robot.reset()
options = {
'limit_switches': True,
'firmware': 'v1.0.5',
'config': {
'ot_version': 'one_pro',
'version': 'v1.0.3', # config version
'alpha_steps_per_mm': 80.0,
'beta_steps_per_mm': 80.0
}
}
self.robot.connect(options=options)
self.robot.home()
self.trash = containers.load('point', 'A1')
self.tiprack = containers.load('tiprack-10ul', 'B2')
self.plate = containers.load('96-flat', 'A2')
self.p200 = instruments.Pipette(
trash_container=self.trash,
tip_racks=[self.tiprack],
min_volume=10, # These are variable
axis="b",
channels=1
)
self.p200.calibrate_plunger(top=0, bottom=10, blow_out=12, drop_tip=13)
self.p200.set_max_volume(200)
def test_all(self):
failures = []
for protocol_path, protocol_dict in self.get_protocols():
Robot.reset()
Robot.get_instance()
try:
jpp = JSONProtocolProcessor(protocol_dict)
jpp.process()
except Exception as e:
failures.append(
(protocol_path, e, jpp.errors)
)
if failures:
print('The following protocols failed to parse')
for path, exc, reason in failures:
print("[{}]. Reason: {}".format(path, exc))
def setUp(self):
self.robot = Robot.reset()
options = {
'limit_switches': False,
'firmware': 'v1.0.5',
'config': {
'ot_version': 'one_pro',
'version': 'v1.0.3', # config version
'alpha_steps_per_mm': 80.0,
'beta_steps_per_mm': 80.0
}
}
self.robot.connect(options=options)
self.robot.home()
self.plate = containers.load('96-flat', 'A2')
self.magbead = instruments.Magbead(mosfet=0, container=self.plate)
self.robot._driver.set_mosfet = mock.Mock()
self.robot._driver.wait = mock.Mock()
def setUp(self):
Robot.reset()
self.robot = Robot.get_instance()
self.protocol = None
def setUp(self):
Robot.reset()
self.plate = containers.load('96-flat', 'A2')
def setUp(self):
Robot.reset()
self.robot = Robot.get_instance()