def dirTraverse_DFS(path, step, stop):
if os.path.exists(path):
curlist = os.listdir(path)
curlist.sort()
#print curlist
for item in curlist:
item_path = path + "/" + item
print item_path
stop += 1
commands = run(stmt_file_path, item_path, step, stop)
runFdsm(commands, item_path)
if os.path.isdir(item_path):
dirTraverse_DFS(item_path, step, stop)
step += 1
commands = run(stmt_file_path, "", step, stop)
#print commands
runFdsm(commands, "")
def dirTraverse_DFS(path, step, stop): if os.path.exists(path): curlist = os.listdir(path) curlist.sort() #print curlist for item in curlist: item_path = path + "/" + item print item_path stop += 1 commands = run(stmt_file_path, item_path, step, stop) runFdsm(commands, item_path) if os.path.isdir(item_path): dirTraverse_DFS(item_path, step, stop) step += 1 commands = run(stmt_file_path, "", step, stop) #print commands runFdsm(commands, "")
def dirTraverse_BFS(rootDir):
step = 0
stop = 0
dirlist = Queue.Queue()
dirlist.put(rootDir)
while not dirlist.empty():
fullpathname = dirlist.get()
if os.path.exists(fullpathname):
curlist = os.listdir(fullpathname)
curlist.sort()
stop += len(curlist)
for fdname in curlist:
item_path = fullpathname + "/" + fdname
if os.path.isdir(item_path):
dirlist.put(item_path)
print item_path
commands = run(stmt_file_path, item_path, step, stop)
#print commands
runFdsm(commands, item_path)
step += 1
commands = run(stmt_file_path, "", step, stop)
#print commands
runFdsm(commands, "")
def dirTraverse_BFS(rootDir): step = 0 stop = 0 dirlist = Queue.Queue() dirlist.put(rootDir) while not dirlist.empty(): fullpathname = dirlist.get() if os.path.exists(fullpathname): curlist = os.listdir(fullpathname) curlist.sort() stop += len(curlist) for fdname in curlist: item_path = fullpathname + "/" + fdname if os.path.isdir(item_path): dirlist.put(item_path) print item_path commands = run(stmt_file_path, item_path, step, stop) #print commands runFdsm(commands, item_path) step += 1 commands = run(stmt_file_path, "", step, stop) #print commands runFdsm(commands, "")
def parse():
input = request.form.get('input')
if input == None:
return 'key: input not found in body'
conversionFrom = request.form.get('conversionFrom')
if conversionFrom == None:
return 'key: conversionFrom not found in body'
conversionTo = request.form.get('conversionTo')
if conversionTo == None:
return 'key: conversionTo not found in body'
conversion = conversionFrom + '-' + conversionTo
try:
return parser.run(conversion, input)
except ValueError as e:
return e.args[0], 400
def extractionSpecification(files):
_authenticate()
for f in files:
xspec = parser.run('data/' + f + '.xs')
# create context, save context id
cm = xspec['header']['Concept Model']
oid = xspec['header']['OID']
ctx = storage.persistent(xspec['header']['Context Name'].lower() + '.ctx')
for de, xss in xspec['entries'].iteritems():
for _xs in xss:
_xs['de'] = ctx['demap'][de]
_xs['concept'] = cm
_xs['oid'] = oid
xs.save(_xs)
storage.persistent(f + '.xs', xspec)
def parse(self, key, callback_url, api_file=None):
import parser
notify = Notify(self.request.id, callback_url)
try:
result = parser.run(key, notify, api_file=api_file)
api_post.apply_async(kwargs={'url': callback_url, 'retry': True}, countdown=1)
return result
except SoftTimeLimitExceeded as e:
notify.send('Timeout, stop job')
api_parse_collect(countdown=2)
raise e
except (BotoClientError, BotoServerError) as e:
msg = 'Sorry, error occure, will try to repeat after 3 minutes.'
notify.send(msg)
notify.admin_send('AWS ERROR: %s' % e.message)
log.error(msg)
raise self.retry(exc=e, countdown=60*2)
except Exception as e:
log.critical(e.message)
notify.admin_send('parse raised: %s' % e.message)
notify.send('Sorry, parser terminated with error, '
'we will fix it and reply to you, thanks!')
api_parse_collect(countdown=2)
raise e
def run(): common.config.init() common.models.init() parser.run() server.run()
def context(files):
_authenticate()
for f in files:
context = parser.run('data/' + f + '.ctx')
# create context, save context id
res = ctx.save(context['header']['Context Name'], context['header']['Context Definition'])
context['id'] = res['id']
# create object classes, save object class id
for _, _oc in context['ocs'].iteritems():
_oc['context'] = context['id']
res = oc.save(_oc)
_oc['id'] = res['id']
# create data types
for _, _dt in context['dts'].iteritems():
dt.save(_dt)
# create conceptual domains, update
# in the case of name collision
# then create value domains
context['vds'] = {}
for _, _cd in context['cds'].iteritems():
existing = cd.get({
'name': _cd['name']
})
if existing:
_cd['id'] = existing['id']
cd.update(_cd)
else:
res = cd.save(_cd)
_cd['id'] = res['id']
_vd = {
'cd': _cd['id'],
'name': _cd['name'] + ':' + _cd['dt'],
'context': context['id'],
'dt': context['dts'][_cd['dt']],
'enumerated': _cd['enumerated'],
'pvs': []
}
res = vd.save(_vd)
_vd['id'] = res['id']
context['vds'][_cd['name']] = _vd
# create data element concepts
# and data elements
context['demap'] = {}
for _, _oc in context['ocs'].iteritems():
for _de in _oc['properties']:
_de['cd'] = context['cds'][_de['cd']]
_de['context'] = context['id']
res = dec.save(_de, _oc)
_de['dec'] = res['id']
_de['vd'] = context['vds'][_de['cd']['name']]
res = de.save(_de)
_de['id']['remote'] = res['id']
context['demap'][_de['id']['local']] = _de['id']['remote']
storage.persistent(f + '.ctx', context)
def train_dev(word_ids, tag_ids, head_ids, rel_ids, indices, isTrain):
losses = []
tot_tokens = 0
tot_cor_arc = 0
tot_cor_rel = 0
step = 0
parser._pdrop_embs = config.pdrop_embs * isTrain
parser._pdrop_lstm = config.pdrop_lstm * isTrain
parser._pdrop_mlp = config.pdrop_mlp * isTrain
parser.embd_mask_generator(parser._pdrop_embs, indices)
sent_ids = [i for i in range(len(word_ids))]
if config.small_model:
num_sents = 10000 if isTrain else 10
sent_ids = sent_ids[:num_sents]
if isTrain:
np.random.shuffle(sent_ids)
# for seq_w, seq_t, seq_h, seq_r in zip(word_ids, tag_ids, head_ids, rel_ids):
for sent_id in sent_ids:
seq_w, seq_t, seq_h, seq_r, masks_w, masks_t = word_ids[sent_id], tag_ids[sent_id], \
head_ids[sent_id], rel_ids[sent_id], \
parser._masks_w[sent_id], parser._masks_t[sent_id]
# if step % config.batch_size == 0 or not isTrain:
if not isTrain:
dy.renew_cg()
loss, num_cor_arc, num_cor_rel = parser.run(seq_w, seq_t, seq_h, seq_r,
masks_w, masks_t, isTrain)
losses.append(dy.sum_batches(loss))
punct_count = 0
for r in seq_r:
if r == parser._punct_id:
punct_count += 1
tot_tokens += len(seq_w) - punct_count
tot_cor_arc += num_cor_arc
tot_cor_rel += num_cor_rel
step += 1
if (step % config.batch_size == 0
or step == len(word_ids) - 1) and isTrain:
# print(step, "\t/\t", len(sent_ids), flush=True)
losses = dy.esum(losses)
losses_value_arc = losses.value()
losses.backward()
# parser._trainer.update()
parser.update_parameters()
if step == len(word_ids) - 1:
print(losses_value_arc)
losses = []
dy.renew_cg()
if config.adam:
parser._global_step += 1
if (not isTrain) and step == len(sent_ids) - 1:
score = (tot_cor_arc / tot_tokens)
score_label = (tot_cor_rel / tot_tokens)
print(score)
print(score_label)
if score > parser._best_score:
parser._update = True
parser._early_stop_count = 0
parser._best_score = score
if score_label > parser._best_score_las:
parser._best_score_las = score_label
print(parser._best_score)
print(parser._best_score_las)
if not config.adam:
parser._global_step += 1
# from pydriller import *
from git import *
import os
import shutil
import stat
import csv
import re
import subprocess
import SetData as sd
import parser as pa
pa.run()
filename, file_dict, file_hash = sd.InitData()
cnt = 0
# File is cloned based on url.
with open(filename, 'r') as txtinput:
all_lines = txtinput.readlines()
all_num = len(all_lines)
for url_data in all_lines:
cnt += 1
try:
if cnt == all_num:
Git('clone_data').clone(url_data)
else:
url_data = url_data[:len(url_data) - 1]
Git('clone_data').clone(url_data)
except Exception as e:
def get_grades(self):
conn = connect("grades.db")
c = conn.cursor()
parser.run(conn, c)
return [line for line in c.execute("SELECT * FROM grades")]
def do_parse(self,arg): parser.run(arg)
def do_cat(self, arg):
path = "/sys/kernel/debug/usb/usbmon/" + arg
#print path
parser.run(path)
import app
import parser
if __name__ == "__main__":
app.run('guangzhou', '2018-05-03', '2018-05-04')
parser.run()
#!/usr/bin/env python3
from config import Config
from data_service import DataService
from parser import run
import logging
logging.basicConfig(level=logging.INFO, filename='parse.log')
if __name__ == '__main__':
config = Config()
data_service = DataService(
config.get('db_connection_url'),
config.get('db_name'),
)
run(config.get('start_url'), data_service)
def run(self): now = datetime.datetime.now() dataset = parser.run(now.month, 12) self.create_course_table() self.insert_course(dataset) self.output_json_file(dataset)
def test():
temp_dir = tempfile.mkdtemp()
link = base64.b64decode(
"aHR0cDovL2NvZGVmb3JjZXMuY29tL2NvbnRlc3QvMTE4MS9wcm9ibGVtL0E=").decode(
"utf-8")
print("Test: " + link)
parser.run(temp_dir, link)
errors = 0
file_name = "cf_sample_1.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("5 4 3".split(), f.read().split())
file_name = "cf_sample_1.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("3 1".split(), f.read().split())
file_name = "cf_sample_2.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("6 8 2".split(), f.read().split())
file_name = "cf_sample_2.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("7 0".split(), f.read().split())
link = base64.b64decode(
"aHR0cDovL2NvZGVmb3JjZXMuY29tL2NvbnRlc3QvMS9wcm9ibGVtL0I=").decode(
"utf-8")
print("Test: " + link)
parser.run(temp_dir, link)
file_name = "cf_sample_1.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("2\nR23C55\nBC23".split(), f.read().split())
file_name = "cf_sample_1.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("BC23\nR23C55".split(), f.read().split())
link = base64.b64decode(
"aHR0cDovL2NvZGVmb3JjZXMuY29tL2NvbnRlc3QvNzAwL3Byb2JsZW0vRA==").decode(
"utf-8")
print("Test: " + link)
parser.run(temp_dir, link)
file_name = "cf_sample_1.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq(
"7\n1 2 1 3 1 2 1\n5\n1 7\n1 3\n3 5\n2 4\n4 4".split(),
f.read().split())
file_name = "cf_sample_1.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("10\n3\n3\n5\n0".split(), f.read().split())
link = base64.b64decode(
"aHR0cDovL2FjbXAucnUvaW5kZXguYXNwP21haW49dGFzayZpZF90YXNrPTc=").decode(
"utf-8")
print("Test: " + link)
parser.run(temp_dir, link)
file_name = "acmp_sample_1.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("5 7 3".split(), f.read().split())
file_name = "acmp_sample_1.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("7".split(), f.read().split())
file_name = "acmp_sample_2.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("987531 234 86364".split(), f.read().split())
file_name = "acmp_sample_2.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("987531".split(), f.read().split())
file_name = "acmp_sample_3.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("189285 283 4958439238923098349024".split(),
f.read().split())
file_name = "acmp_sample_3.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("4958439238923098349024".split(), f.read().split())
link = base64.b64decode(
"aHR0cDovL2FjbXAucnUvaW5kZXguYXNwP21haW49dGFzayZpZF90YXNrPTQzMg=="
).decode("utf-8")
print("Test: " + link)
parser.run(temp_dir, link)
file_name = "acmp_sample_1.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq(
"5 10\n##......#.\n.#..#...#.\n.###....#.\n..##....#.\n........#.".
split(),
f.read().split())
file_name = "acmp_sample_1.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("3".split(), f.read().split())
file_name = "acmp_sample_2.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq(
"5 10\n##..#####.\n.#.#.#....\n###..##.#.\n..##.....#\n.###.#####".
split(),
f.read().split())
file_name = "acmp_sample_2.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("5".split(), f.read().split())
link = base64.b64decode(
"aHR0cDovL2FjbXAucnUvaW5kZXguYXNwP21haW49dGFzayZpZF90YXNrPTIzOQ=="
).decode("utf-8")
print("Test: " + link)
parser.run(temp_dir, link)
file_name = "acmp_sample_1.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq(
"4 3 3\n2 2 2\n2 0 0\n2 1 2\n2 2 2\n2 10 0 0\n1 5 1\n4 6 0 0 1".
split(),
f.read().split())
file_name = "acmp_sample_1.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("15".split(), f.read().split())
link = base64.b64decode(
"aHR0cDovL2FjbS50aW11cy5ydS9wcm9ibGVtLmFzcHg/c3BhY2U9MSZudW09MTAwMQ=="
).decode("utf-8")
print("Test: " + link)
parser.run(temp_dir, link)
file_name = "timus_sample_1.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq(
" 1427 0 \n 876652098643267843 \n5276538\n \n ".split(),
f.read().split())
file_name = "timus_sample_1.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq(
"2297.0716\n936297014.1164\n0.0000\n37.7757".split(),
f.read().split())
link = base64.b64decode(
"aHR0cDovL2FjbS50aW11cy5ydS9wcm9ibGVtLmFzcHg/c3BhY2U9MSZudW09MTIzMg=="
).decode("utf-8")
print("Test: " + link)
parser.run(temp_dir, link)
file_name = "timus_sample_1.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("11 5 2".split(), f.read().split())
file_name = "timus_sample_1.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("3\n0 3 7\n3 3 3\n3 –1 0".split(),
f.read().split())
link = base64.b64decode(
"aHR0cDovL2FjbS50aW11cy5ydS9wcm9ibGVtLmFzcHg/c3BhY2U9MSZudW09MTQxMg=="
).decode("utf-8")
print("Test: " + link)
parser.run(temp_dir, link)
file_name = "timus_sample_1.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("10 10\n2\n0.5 2\n2 10.1".split(),
f.read().split())
file_name = "timus_sample_1.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("99.666".split(), f.read().split())
link = base64.b64decode(
"aHR0cHM6Ly9hdGNvZGVyLmpwL2NvbnRlc3RzL2FiYzE0MS90YXNrcy9hYmMxNDFfYQ=="
).decode("utf-8")
print("Test: " + link)
parser.run(temp_dir, link)
file_name = "atcoder_sample_1.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("Sunny".split(), f.read().split())
file_name = "atcoder_sample_1.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("Cloudy".split(), f.read().split())
file_name = "atcoder_sample_2.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("Rainy".split(), f.read().split())
file_name = "atcoder_sample_2.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("Sunny".split(), f.read().split())
link = base64.b64decode(
"aHR0cHM6Ly9hdGNvZGVyLmpwL2NvbnRlc3RzL2FiYzE0MS90YXNrcy9hYmMxNDFfYw=="
).decode("utf-8")
print("Test: " + link)
parser.run(temp_dir, link)
file_name = "atcoder_sample_1.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("6 3 4\n3\n1\n3\n2".split(), f.read().split())
file_name = "atcoder_sample_1.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("No\nNo\nYes\nNo\nNo\nNo".split(),
f.read().split())
file_name = "atcoder_sample_2.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("6 5 4\n3\n1\n3\n2".split(), f.read().split())
file_name = "atcoder_sample_2.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("Yes\nYes\nYes\nYes\nYes\nYes".split(),
f.read().split())
file_name = "atcoder_sample_3.in"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq(
"10 13 15\n3\n1\n4\n1\n5\n9\n2\n6\n5\n3\n5\n8\n9\n7\n9".split(),
f.read().split())
file_name = "atcoder_sample_3.out"
with open(os.path.join(temp_dir, file_name), "r") as f:
print("Checking " + file_name)
errors += assert_eq("No\nNo\nNo\nNo\nYes\nNo\nNo\nNo\nYes\nNo".split(),
f.read().split())
shutil.rmtree(temp_dir)
exit(errors)
def main():
args = parser.run()
dispatch(args)
def do_cat(self, arg):
path = "/sys/kernel/debug/usb/usbmon/" + arg
#print path
parser.run(path)
import sys
sys.path.insert(0,'python-src')
sys.path.insert(0,'mic/')
import numpy as np
import pandas as pd
import time
import pymictools
import futil
import parser
import fs
if __name__ == "__main__":
args = parser.run()
if(args): #if there are arguments
[micArgs,fsArgs,fullArgs] = args
futil.createFolder("tmp")
filename = futil.getFileName(fullArgs["filepath"])
if(fullArgs["dataset_orientation"]==0): #dataset column feature
micInputPath = "tmp/"+filename
mlInputPath = fullArgs["filepath"]
futil.transposeDataset(fullArgs["filepath"],micInputPath)
micArgs = micArgs.replace(fullArgs["filepath"],micInputPath)
else: #dataset row feature
micInputPath = fullArgs["filepath"]
mlInputPath = "tmp/"+filename
futil.transposeDataset(fullArgs["filepath"],mlInputPath)
#Exectute ranking features
initTime = time.time()
MICCommand = "mictools"+micArgs
def run(self):
now = datetime.datetime.now()
dataset = parser.run(now.month, 12)
self.create_course_table()
self.insert_course(dataset)
self.output_json_file(dataset)