import intervals as I
import project_functions
from config import *
import db_functions
import pandas as pd
file_name = '/home/olivier/gdrive/src/python/pyobserver/boris_projects/testing/test2_v7.boris'
project_path, project_changed, pj, msg = project_functions.open_project_json(
file_name)
# print(pj[OBSERVATIONS].keys())
selected_observations = [
'0588', '1000', '0160', '0259', '0447', '0860', '1342'
]
selected_observations = list(pj[OBSERVATIONS].keys())
selected_subjects = [pj[SUBJECTS][x]["name"] for x in pj[SUBJECTS]]
print(selected_subjects)
selected_behaviors = [pj[ETHOGRAM][x]["code"] for x in pj[ETHOGRAM]]
print(selected_behaviors)
def sql():
cursor = db_functions.load_aggregated_events_in_db(pj, selected_subjects,
selected_observations,
selected_behaviors)
if args.command[0].upper() == "LIST":
for command in commands_list:
print(command)
print("=" * len(command))
if command in commands_usage:
print(commands_usage[command])
print()
print()
sys.exit()
if args.project_file:
if not args.command:
print("Project path: {}".format(args.project_file))
project_path, project_changed, pj, msg = project_functions.open_project_json(
args.project_file)
if "error" in pj:
print(pj["error"])
sys.exit()
if msg:
print(msg)
if args.observation_id:
observations_id_list = args.observation_id
'''
if not args.command:
print("\nObservations:")
for observation_id in observations_id_list:
if observation_id in pj[OBSERVATIONS]:
print("Id: {}".format(observation_id))
else:
fig.autofmt_xdate()
plt.tight_layout()
if output_file_name:
plt.savefig(output_file_name)
else:
plt.show()
return {"error code": 0, "msg": ""}
if __name__ == '__main__':
import project_functions
_, _, pj, _ = project_functions.open_project_json(
"/home/olivier/gdrive/src/python/pyobserver/boris_projects/boris_projects_from_users/lontre/progetto_lontre_zoom_2017-02-27_modified.boris"
)
create_events_plot2_new(pj, ["0015", "0016"],
["Nina", "Himal", "Nautilus", "Sharky"],
["Alert", "Locomotion", "Sniff", "Rest", "Rub"],
True,
TIME_FULL_OBS,
0,
0,
plot_directory="/tmp",
file_format="pdf")
'''
63.167), (64.059, 67.251), (91.92, 94.602)], 'Rest': [], 'Rub |On the ground': [], 'Rub |On the trunks': [(67.334, 68.449)], 'Sniff': [(7.27, 8.514)], 'Sniff|An object': [], 'Sniff|The ground': [(67.333, 68.449)]}