def test_parse_reaction_list(self):
reactions = list(
native.parse_reaction_list('./test.yaml', [{
'id': 'rxn1',
'equation': {
'reversible': True,
'left': [{
'id': 'A',
'value': 1
}, {
'id': 'B',
'value': 2
}],
'right': [{
'id': 'C',
'value': 1
}]
}
}]))
self.assertEqual(len(reactions), 1)
reaction = Reaction(Direction.Both, [(Compound('A'), 1),
(Compound('B'), 2)],
[(Compound('C'), 1)])
self.assertEqual(reactions[0].equation, reaction)
def test_parse_reaction_list_missing_value(self):
with self.assertRaises(native.ParseError):
reactions = list(
native.parse_reaction_list('./test.yaml', [{
'id': 'rxn1',
'equation': {
'left': [{
'id': 'A'
}]
}
}]))
def test_parse_reaction_list_missing_value(self):
with self.assertRaises(native.ParseError):
reactions = list(native.parse_reaction_list('./test.yaml', [
{
'id': 'rxn1',
'equation': {
'left': [
{ 'id': 'A' }
]
}
}
]))
def test_parse_reaction_list(self):
reactions = list(native.parse_reaction_list('./test.yaml', [
{
'id': 'rxn1',
'equation': {
'reversible': True,
'left': [
{ 'id': 'A', 'value': 1 },
{ 'id': 'B', 'value': 2 } ],
'right': [
{ 'id': 'C', 'value': 1 }
]
}
}
]))
self.assertEquals(len(reactions), 1)
reaction = Reaction(Reaction.Bidir,
[(Compound('A'), 1), (Compound('B'), 2)],
[(Compound('C'), 1)])
self.assertEquals(reactions[0].equation, reaction)
