def test_from_dict():
"""
Tests creating BBN from dictionary (deserialized from JSON).
:return: None.
"""
e_bbn = BbnUtil.get_huang_graph()
o_bbn = Bbn.from_dict(Bbn.to_dict(e_bbn))
assert len(e_bbn.get_nodes()) == len(o_bbn.get_nodes())
assert len(e_bbn.get_edges()) == len(o_bbn.get_edges())
def test_generated_serde():
"""
Tests serde of generated BBN.
:return: Nonde.
"""
g, p = generate_singly_bbn(100, max_iter=10)
e_bbn = convert_for_exact_inference(g, p)
d = Bbn.to_dict(e_bbn)
s = json.dumps(d, sort_keys=True, indent=2)
d = json.loads(s)
o_bbn = Bbn.from_dict(d)
assert len(e_bbn.get_nodes()) == len(o_bbn.get_nodes())
assert len(e_bbn.get_edges()) == len(o_bbn.get_edges())
import json
import numpy as np
from pybbn.generator.bbngenerator import generate_multi_bbn, convert_for_exact_inference
from pybbn.graph.dag import Bbn
np.random.seed(37)
g, p = generate_multi_bbn(900, max_iter=10)
s_bbn = convert_for_exact_inference(g, p)
with open('multi-bbn.json', 'w') as f:
f.write(json.dumps(Bbn.to_dict(s_bbn), sort_keys=True, indent=2))
def test_to_dict():
"""
Tests creating serializable dictionary representation.
:return: None.
"""
bbn = BbnUtil.get_huang_graph()
d = Bbn.to_dict(bbn)
j = json.dumps(d, sort_keys=True, indent=2)
e = """{
"edges": [
{
"ch": 1,
"pa": 0
},
{
"ch": 2,
"pa": 0
},
{
"ch": 3,
"pa": 1
},
{
"ch": 4,
"pa": 2
},
{
"ch": 5,
"pa": 3
},
{
"ch": 5,
"pa": 4
},
{
"ch": 6,
"pa": 2
},
{
"ch": 7,
"pa": 4
},
{
"ch": 7,
"pa": 6
}
],
"nodes": {
"0": {
"probs": [
0.5,
0.5
],
"variable": {
"id": 0,
"name": "a",
"values": [
"on",
"off"
]
}
},
"1": {
"probs": [
0.5,
0.5,
0.4,
0.6
],
"variable": {
"id": 1,
"name": "b",
"values": [
"on",
"off"
]
}
},
"2": {
"probs": [
0.7,
0.3,
0.2,
0.8
],
"variable": {
"id": 2,
"name": "c",
"values": [
"on",
"off"
]
}
},
"3": {
"probs": [
0.9,
0.1,
0.5,
0.5
],
"variable": {
"id": 3,
"name": "d",
"values": [
"on",
"off"
]
}
},
"4": {
"probs": [
0.3,
0.7,
0.6,
0.4
],
"variable": {
"id": 4,
"name": "e",
"values": [
"on",
"off"
]
}
},
"5": {
"probs": [
0.01,
0.99,
0.01,
0.99,
0.01,
0.99,
0.99,
0.01
],
"variable": {
"id": 5,
"name": "f",
"values": [
"on",
"off"
]
}
},
"6": {
"probs": [
0.8,
0.2,
0.1,
0.9
],
"variable": {
"id": 6,
"name": "g",
"values": [
"on",
"off"
]
}
},
"7": {
"probs": [
0.05,
0.95,
0.95,
0.05,
0.95,
0.05,
0.95,
0.05
],
"variable": {
"id": 7,
"name": "h",
"values": [
"on",
"off"
]
}
}
}
}"""
assert len(j) == len(e)
assert j == e
