def test_str_has_both(self):
namespace, identifier = n(), n()
node = Abundance(namespace=namespace, identifier=identifier)
self.assertEqual(
'a({namespace}:{identifier})'.format(namespace=namespace, identifier=ensure_quotes(identifier)),
node.as_bel(),
)
def test_str_has_identifier(self):
namespace, identifier = n(), n()
node = Abundance(namespace=namespace, identifier=identifier)
self.assertEqual(
'a({namespace}:{identifier})'.format(namespace=namespace,
identifier=identifier),
node.as_bel())
def test_abundance_as_bel(self):
"""Test converting an abundance to BEL with a name that does not need quotation."""
namespace, name = 'HGNC', 'YFG'
node = Abundance(namespace=namespace, name=name)
self.assertEqual('a(HGNC:YFG)', node.as_bel())
def test_abundance_as_bel_quoted(self):
"""Test converting an abundance to BEL with a name that needs quotation."""
namespace, name = 'HGNC', 'YFG-1'
node = Abundance(namespace=namespace, name=name)
self.assertEqual('a(HGNC:"YFG-1")', node.as_bel())
def test_as_tuple(self):
namespace, name = n(), n()
node = Abundance(namespace=namespace, name=name)
self.assertEqual(hash(node), hash(node.as_bel()))
def test_abundance_as_no_quotes(self):
"""Test converting an abundance that doesn't need quotes, but looks crazy."""
namespace, name = 'a-c', 'd.e.f'
node = Abundance(namespace=namespace, name=name)
self.assertEqual('a(a-c:d.e.f)', node.as_bel())