示例#1
0
 def test_smd_write(self):
     test_molecule = QCInput.from_file(os.path.join(test_dir, "new_qchem_files/pcm.qin")).molecule
     dict_set = QChemDictSet(
         molecule=test_molecule,
         job_type="opt",
         basis_set="6-31g*",
         scf_algorithm="diis",
         dft_rung=5,
         smd_solvent="water",
         max_scf_cycles=35,
     )
     dict_set.write("mol.qin")
     test_dict = QCInput.from_file("mol.qin").as_dict()
     rem = {
         "job_type": "opt",
         "basis": "6-31G*",
         "max_scf_cycles": "35",
         "method": "wb97mv",
         "geom_opt_max_cycles": "200",
         "gen_scfman": "true",
         "scf_algorithm": "diis",
         "xc_grid": "3",
         "solvent_method": "smd",
         "ideriv": "1",
         "symmetry": "false",
         "sym_ignore": "true",
         "resp_charges": "true",
     }
     qc_input = QCInput(molecule=test_molecule, rem=rem, smx={"solvent": "water"})
     for k, v in qc_input.as_dict().items():
         self.assertEqual(v, test_dict[k])
     os.remove("mol.qin")
示例#2
0
 def test_pcm_write(self):
     test_molecule = QCInput.from_file(
         os.path.join(test_dir, "new_qchem_files/pcm.qin")).molecule
     dict_set = QChemDictSet(
         molecule=test_molecule,
         job_type="opt",
         basis_set="6-31g*",
         scf_algorithm="diis",
         dft_rung=5,
         pcm_dielectric=10.0,
         max_scf_cycles=35,
     )
     dict_set.write("mol.qin")
     test_dict = QCInput.from_file("mol.qin").as_dict()
     rem = {
         "job_type": "opt",
         "basis": "6-31G*",
         "max_scf_cycles": "35",
         "method": "wb97mv",
         "geom_opt_max_cycles": "200",
         "gen_scfman": "true",
         "scf_algorithm": "diis",
         "xc_grid": "3",
         "thresh": "14",
         "s2thresh": "16",
         "solvent_method": "pcm",
         "symmetry": "false",
         "sym_ignore": "true",
         "resp_charges": "true",
     }
     pcm = {
         "heavypoints": "194",
         "hpoints": "194",
         "radii": "uff",
         "theory": "cpcm",
         "vdwscale": "1.1",
     }
     qc_input = QCInput(molecule=test_molecule,
                        rem=rem,
                        pcm=pcm,
                        solvent={"dielectric": "10.0"})
     for k, v in qc_input.as_dict().items():
         self.assertEqual(v, test_dict[k])
     os.remove("mol.qin")