def test_smallworldness(): """ Test small-world coefficient (omega) computation """ base_dir = str(Path(__file__).parent/"examples") est_path = f"{base_dir}/miscellaneous/sub-0021001_rsn-Default_nodetype-parc_model-sps_template-MNI152_T1_thrtype-DENS_thr-0.19.npy" in_mat = np.load(est_path) G = nx.from_numpy_array(in_mat) sigma = netstats.smallworldness(G, niter=5, nrand=5, approach='clustering', reference='random') # A network is smallworld if sigma > 1 assert sigma > 1
def test_smallworldness(): """ Test small-world coefficient (omega) computation """ base_dir = str(Path(__file__).parent / "examples") est_path = f"{base_dir}/miscellaneous/0021001_rsn-Default_nodetype-parc_est-sps_thrtype-DENS_thr-0.19.npy" in_mat = np.load(est_path) G = nx.from_numpy_array(in_mat) omega = netstats.smallworldness(G, niter=5, nrand=5) # A network is smallworld if omega > 1 assert omega > 1