示例#1
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    def test_get_ghf_orbspin(self):
        orbspin = addons.get_ghf_orbspin(mf.mo_energy, mf.mo_occ)
        self.assertEqual(list(orbspin), [
            0, 1, 0, 1, 0, 1, 0, 1, 0, 1, 0, 1, 0, 1, 0, 1, 0, 1, 0, 1, 0, 1,
            0, 1, 0, 1
        ])

        orbspin = addons.get_ghf_orbspin(mf_u.mo_energy,
                                         mf_u.mo_occ,
                                         is_rhf=False)
        self.assertEqual(list(orbspin), [
            0, 1, 0, 1, 0, 1, 0, 0, 1, 0, 1, 0, 1, 1, 0, 0, 1, 0, 1, 0, 1, 1,
            0, 1, 0, 1
        ])
示例#2
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        def update_mo_(mf, mf1):
            _keys = mf._keys.union(mf1._keys)
            mf1.__dict__.update(mf.__dict__)
            mf1._keys = _keys
            if mf.mo_energy is not None:
                mf1.mo_energy = []
                mf1.mo_occ = []
                mf1.mo_coeff = []
                nkpts = len(mf.kpts)
                is_rhf = isinstance(mf, scf.hf.RHF)
                for k in range(nkpts):
                    if is_rhf:
                        mo_a = mo_b = mf.mo_coeff[k]
                        ea = getattr(mf.mo_energy[k], 'mo_ea', mf.mo_energy[k])
                        eb = getattr(mf.mo_energy[k], 'mo_eb', mf.mo_energy[k])
                        occa = mf.mo_occ[k] > 0
                        occb = mf.mo_occ[k] == 2
                        orbspin = mol_addons.get_ghf_orbspin(
                            ea, mf.mo_occ[k], True)
                    else:
                        mo_a = mf.mo_coeff[0][k]
                        mo_b = mf.mo_coeff[1][k]
                        ea = mf.mo_energy[0][k]
                        eb = mf.mo_energy[1][k]
                        occa = mf.mo_occ[0][k]
                        occb = mf.mo_occ[1][k]
                        orbspin = mol_addons.get_ghf_orbspin(
                            (ea, eb), (occa, occb), False)

                    nao, nmo = mo_a.shape

                    mo_energy = numpy.empty(nmo * 2)
                    mo_energy[orbspin == 0] = ea
                    mo_energy[orbspin == 1] = eb
                    mo_occ = numpy.empty(nmo * 2)
                    mo_occ[orbspin == 0] = occa
                    mo_occ[orbspin == 1] = occb

                    mo_coeff = numpy.zeros((nao * 2, nmo * 2),
                                           dtype=mo_a.dtype)
                    mo_coeff[:nao, orbspin == 0] = mo_a
                    mo_coeff[nao:, orbspin == 1] = mo_b
                    mo_coeff = lib.tag_array(mo_coeff, orbspin=orbspin)

                    mf1.mo_energy.append(mo_energy)
                    mf1.mo_occ.append(mo_occ)
                    mf1.mo_coeff.append(mo_coeff)

            return mf1
示例#3
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文件: addons.py 项目: chrinide/pyscf
        def update_mo_(mf, mf1):
            _keys = mf._keys.union(mf1._keys)
            mf1.__dict__.update(mf.__dict__)
            mf1._keys = _keys
            if mf.mo_energy is not None:
                mf1.mo_energy = []
                mf1.mo_occ = []
                mf1.mo_coeff = []
                nkpts = len(mf.kpts)
                is_rhf = isinstance(mf, scf.hf.RHF)
                for k in range(nkpts):
                    if is_rhf:
                        mo_a = mo_b = mf.mo_coeff[k]
                        ea = eb = mf.mo_energy[k]
                        occa = mf.mo_occ[k] > 0
                        occb = mf.mo_occ[k] == 2
                        orbspin = mol_addons.get_ghf_orbspin(ea, mf.mo_occ[k], True)
                    else:
                        mo_a = mf.mo_coeff[0][k]
                        mo_b = mf.mo_coeff[1][k]
                        ea = mf.mo_energy[0][k]
                        eb = mf.mo_energy[1][k]
                        occa = mf.mo_occ[0][k]
                        occb = mf.mo_occ[1][k]
                        orbspin = mol_addons.get_ghf_orbspin((ea, eb), (occa, occb), False)

                    nao, nmo = mo_a.shape

                    mo_energy = numpy.empty(nmo*2)
                    mo_energy[orbspin==0] = ea
                    mo_energy[orbspin==1] = eb
                    mo_occ = numpy.empty(nmo*2)
                    mo_occ[orbspin==0] = occa
                    mo_occ[orbspin==1] = occb

                    mo_coeff = numpy.zeros((nao*2,nmo*2), dtype=mo_a.dtype)
                    mo_coeff[:nao,orbspin==0] = mo_a
                    mo_coeff[nao:,orbspin==1] = mo_b
                    mo_coeff = lib.tag_array(mo_coeff, orbspin=orbspin)

                    mf1.mo_energy.append(mo_energy)
                    mf1.mo_occ.append(mo_occ)
                    mf1.mo_coeff.append(mo_coeff)

            return mf1
示例#4
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    def test_get_ghf_orbspin(self):
        orbspin = addons.get_ghf_orbspin(mf.mo_energy, mf.mo_occ)
        self.assertEqual(list(orbspin), [0,1,0,1,0,1,0,1,0,1,0,1,0,1,0,1,0,1,0,1,0,1,0,1,0,1])

        orbspin = addons.get_ghf_orbspin(mf_u.mo_energy, mf_u.mo_occ, is_rhf=False)
        self.assertEqual(list(orbspin), [0,1,0,1,0,1,0,0,1,0,1,0,1,1,0,0,1,0,1,0,1,1,0,1,0,1])