def main(): parser = argparse.ArgumentParser() parser.add_argument("-acc", "--accumulation-steps", type=int, default=1, help="Number of batches to process") parser.add_argument("--seed", type=int, default=42, help="Random seed") parser.add_argument("--obliterate", type=float, default=0, help="Change of obliteration") parser.add_argument("-nid", "--negative-image-dir", type=str, default=None, help="Change of obliteration") parser.add_argument("-v", "--verbose", action="store_true") parser.add_argument("--fast", action="store_true") parser.add_argument("--cache", action="store_true") parser.add_argument("-dd", "--data-dir", type=str, default=os.environ.get("KAGGLE_2020_ALASKA2")) parser.add_argument("-m", "--model", type=str, default="resnet34", help="") parser.add_argument("-b", "--batch-size", type=int, default=16, help="Batch Size during training, e.g. -b 64") parser.add_argument( "-wbs", "--warmup-batch-size", type=int, default=None, help="Batch Size during training, e.g. -b 64" ) parser.add_argument("-e", "--epochs", type=int, default=100, help="Epoch to run") parser.add_argument( "-es", "--early-stopping", type=int, default=None, help="Maximum number of epochs without improvement" ) parser.add_argument("-fe", "--freeze-encoder", action="store_true", help="Freeze encoder parameters for N epochs") parser.add_argument("-lr", "--learning-rate", type=float, default=1e-3, help="Initial learning rate") parser.add_argument( "-l", "--modification-flag-loss", type=str, default=None, action="append", nargs="+" # [["ce", 1.0]], ) parser.add_argument( "--modification-type-loss", type=str, default=None, action="append", nargs="+" # [["ce", 1.0]], ) parser.add_argument("--embedding-loss", type=str, default=None, action="append", nargs="+") # [["ce", 1.0]], parser.add_argument("--feature-maps-loss", type=str, default=None, action="append", nargs="+") # [["ce", 1.0]], parser.add_argument("--mask-loss", type=str, default=None, action="append", nargs="+") # [["ce", 1.0]], parser.add_argument("--bits-loss", type=str, default=None, action="append", nargs="+") # [["ce", 1.0]], parser.add_argument("-o", "--optimizer", default="RAdam", help="Name of the optimizer") parser.add_argument( "-c", "--checkpoint", type=str, default=None, help="Checkpoint filename to use as initial model weights" ) parser.add_argument("-w", "--workers", default=8, type=int, help="Num workers") parser.add_argument("-a", "--augmentations", default="safe", type=str, help="Level of image augmentations") parser.add_argument("--transfer", default=None, type=str, help="") parser.add_argument("--fp16", action="store_true") parser.add_argument("--mixup", action="store_true") parser.add_argument("--cutmix", action="store_true") parser.add_argument("--tsa", action="store_true") parser.add_argument("--fold", default=None, type=int) parser.add_argument("-s", "--scheduler", default=None, type=str, help="") parser.add_argument("-x", "--experiment", default=None, type=str, help="") parser.add_argument("-d", "--dropout", default=None, type=float, help="Dropout before head layer") parser.add_argument( "--warmup", default=0, type=int, help="Number of warmup epochs with reduced LR on encoder parameters" ) parser.add_argument( "--fine-tune", default=0, type=int, help="Number of warmup epochs with reduced LR on encoder parameters" ) parser.add_argument("-wd", "--weight-decay", default=0, type=float, help="L2 weight decay") parser.add_argument("--show", action="store_true") parser.add_argument("--balance", action="store_true") parser.add_argument("--freeze-bn", action="store_true") args = parser.parse_args() set_manual_seed(args.seed) assert ( args.modification_flag_loss or args.modification_type_loss or args.embedding_loss ), "At least one of losses must be set" modification_flag_loss = args.modification_flag_loss modification_type_loss = args.modification_type_loss embedding_loss = args.embedding_loss feature_maps_loss = args.feature_maps_loss mask_loss = args.mask_loss bits_loss = args.bits_loss freeze_encoder = args.freeze_encoder data_dir = args.data_dir cache = args.cache num_workers = args.workers num_epochs = args.epochs learning_rate = args.learning_rate model_name: str = args.model optimizer_name = args.optimizer image_size = (512, 512) fast = args.fast augmentations = args.augmentations fp16 = args.fp16 scheduler_name = args.scheduler experiment = args.experiment dropout = args.dropout verbose = args.verbose warmup = args.warmup show = args.show accumulation_steps = args.accumulation_steps weight_decay = args.weight_decay fold = args.fold balance = args.balance freeze_bn = args.freeze_bn train_batch_size = args.batch_size mixup = args.mixup cutmix = args.cutmix tsa = args.tsa fine_tune = args.fine_tune obliterate_p = args.obliterate negative_image_dir = args.negative_image_dir warmup_batch_size = args.warmup_batch_size or args.batch_size # Compute batch size for validation valid_batch_size = train_batch_size run_train = num_epochs > 0 custom_model_kwargs = {} if dropout is not None: custom_model_kwargs["dropout"] = float(dropout) if embedding_loss is not None: custom_model_kwargs["need_embedding"] = True model: nn.Module = get_model(model_name, **custom_model_kwargs).cuda() required_features = model.required_features if mask_loss is not None: required_features.append(INPUT_TRUE_MODIFICATION_MASK) if args.transfer: transfer_checkpoint = fs.auto_file(args.transfer) print("Transferring weights from model checkpoint", transfer_checkpoint) checkpoint = load_checkpoint(transfer_checkpoint) pretrained_dict = checkpoint["model_state_dict"] transfer_weights(model, pretrained_dict) if args.checkpoint: checkpoint = load_checkpoint(fs.auto_file(args.checkpoint)) unpack_checkpoint(checkpoint, model=model) print("Loaded model weights from:", args.checkpoint) report_checkpoint(checkpoint) if freeze_bn: from pytorch_toolbelt.optimization.functional import freeze_model freeze_model(model, freeze_bn=True) print("Freezing bn params") main_metric = "loss" main_metric_minimize = True current_time = datetime.now().strftime("%b%d_%H_%M") checkpoint_prefix = f"{current_time}_{args.model}_fold{fold}" if fp16: checkpoint_prefix += "_fp16" if fast: checkpoint_prefix += "_fast" if mixup: checkpoint_prefix += "_mixup" if cutmix: checkpoint_prefix += "_cutmix" if experiment is not None: checkpoint_prefix = experiment log_dir = os.path.join("runs", checkpoint_prefix) os.makedirs(log_dir, exist_ok=False) config_fname = os.path.join(log_dir, f"{checkpoint_prefix}.json") with open(config_fname, "w") as f: train_session_args = vars(args) f.write(json.dumps(train_session_args, indent=2)) default_callbacks = [] if show: default_callbacks += [ShowPolarBatchesCallback(draw_predictions, metric="loss", minimize=True)] # Pretrain/warmup if warmup: train_ds, valid_ds, train_sampler = get_datasets( data_dir=data_dir, augmentation=augmentations, balance=balance, fast=fast, fold=fold, features=required_features, obliterate_p=0, ) criterions_dict, loss_callbacks = get_criterions( modification_flag=modification_flag_loss, modification_type=modification_type_loss, embedding_loss=embedding_loss, mask_loss=mask_loss, bits_loss=bits_loss, feature_maps_loss=feature_maps_loss, num_epochs=warmup, mixup=mixup, cutmix=cutmix, tsa=tsa, ) callbacks = ( default_callbacks + loss_callbacks + [ OptimizerCallback(accumulation_steps=accumulation_steps, decouple_weight_decay=False), HyperParametersCallback( hparam_dict={ "model": model_name, "scheduler": scheduler_name, "optimizer": optimizer_name, "augmentations": augmentations, "size": image_size[0], "weight_decay": weight_decay, } ), ] ) loaders = collections.OrderedDict() loaders["train"] = DataLoader( train_ds, batch_size=warmup_batch_size, num_workers=num_workers, pin_memory=True, drop_last=True, shuffle=train_sampler is None, sampler=train_sampler, ) loaders["valid"] = DataLoader(valid_ds, batch_size=warmup_batch_size, num_workers=num_workers, pin_memory=True) if freeze_encoder: from pytorch_toolbelt.optimization.functional import freeze_model freeze_model(model.encoder, freeze_parameters=True, freeze_bn=None) optimizer = get_optimizer( "Ranger", get_optimizable_parameters(model), weight_decay=weight_decay, learning_rate=3e-4 ) scheduler = None print("Train session :", checkpoint_prefix) print(" FP16 mode :", fp16) print(" Fast mode :", args.fast) print(" Epochs :", num_epochs) print(" Workers :", num_workers) print(" Data dir :", data_dir) print(" Log dir :", log_dir) print(" Cache :", cache) print("Data ") print(" Augmentations :", augmentations) print(" Negative images:", negative_image_dir) print(" Train size :", len(loaders["train"]), "batches", len(train_ds), "samples") print(" Valid size :", len(loaders["valid"]), "batches", len(valid_ds), "samples") print(" Image size :", image_size) print(" Balance :", balance) print(" Mixup :", mixup) print(" CutMix :", cutmix) print(" TSA :", tsa) print("Model :", model_name) print(" Parameters :", count_parameters(model)) print(" Dropout :", dropout, "(Non-default)" if dropout is not None else "") print("Optimizer :", optimizer_name) print(" Learning rate :", learning_rate) print(" Weight decay :", weight_decay) print(" Scheduler :", scheduler_name) print(" Batch sizes :", train_batch_size, valid_batch_size) print("Losses ") print(" Flag :", modification_flag_loss) print(" Type :", modification_type_loss) print(" Embedding :", embedding_loss) print(" Feature maps :", feature_maps_loss) print(" Mask :", mask_loss) print(" Bits :", bits_loss) runner = SupervisedRunner(input_key=required_features, output_key=None) runner.train( fp16=fp16, model=model, criterion=criterions_dict, optimizer=optimizer, scheduler=scheduler, callbacks=callbacks, loaders=loaders, logdir=os.path.join(log_dir, "warmup"), num_epochs=warmup, verbose=verbose, main_metric=main_metric, minimize_metric=main_metric_minimize, checkpoint_data={"cmd_args": vars(args)}, ) del optimizer, loaders, runner, callbacks best_checkpoint = os.path.join(log_dir, "warmup", "checkpoints", "best.pth") model_checkpoint = os.path.join(log_dir, f"{checkpoint_prefix}_warmup.pth") clean_checkpoint(best_checkpoint, model_checkpoint) # Restore state of best model # unpack_checkpoint(load_checkpoint(model_checkpoint), model=model) torch.cuda.empty_cache() gc.collect() if run_train: train_ds, valid_ds, train_sampler = get_datasets( data_dir=data_dir, augmentation=augmentations, balance=balance, fast=fast, fold=fold, features=required_features, obliterate_p=obliterate_p, ) if negative_image_dir: negatives_ds = get_negatives_ds( negative_image_dir, fold=fold, features=required_features, max_images=16536 ) train_ds = train_ds + negatives_ds train_sampler = None # TODO: Add proper support of sampler print("Adding", len(negatives_ds), "negative samples to training set") criterions_dict, loss_callbacks = get_criterions( modification_flag=modification_flag_loss, modification_type=modification_type_loss, embedding_loss=embedding_loss, feature_maps_loss=feature_maps_loss, mask_loss=mask_loss, bits_loss=bits_loss, num_epochs=num_epochs, mixup=mixup, cutmix=cutmix, tsa=tsa, ) callbacks = ( default_callbacks + loss_callbacks + [ OptimizerCallback(accumulation_steps=accumulation_steps, decouple_weight_decay=False), HyperParametersCallback( hparam_dict={ "model": model_name, "scheduler": scheduler_name, "optimizer": optimizer_name, "augmentations": augmentations, "size": image_size[0], "weight_decay": weight_decay, } ), ] ) loaders = collections.OrderedDict() loaders["train"] = DataLoader( train_ds, batch_size=train_batch_size, num_workers=num_workers, pin_memory=True, drop_last=True, shuffle=train_sampler is None, sampler=train_sampler, ) loaders["valid"] = DataLoader(valid_ds, batch_size=valid_batch_size, num_workers=num_workers, pin_memory=True) print("Train session :", checkpoint_prefix) print(" FP16 mode :", fp16) print(" Fast mode :", args.fast) print(" Epochs :", num_epochs) print(" Workers :", num_workers) print(" Data dir :", data_dir) print(" Log dir :", log_dir) print(" Cache :", cache) print("Data ") print(" Augmentations :", augmentations) print(" Obliterate (%) :", obliterate_p) print(" Negative images:", negative_image_dir) print(" Train size :", len(loaders["train"]), "batches", len(train_ds), "samples") print(" Valid size :", len(loaders["valid"]), "batches", len(valid_ds), "samples") print(" Image size :", image_size) print(" Balance :", balance) print(" Mixup :", mixup) print(" CutMix :", cutmix) print(" TSA :", tsa) print("Model :", model_name) print(" Parameters :", count_parameters(model)) print(" Dropout :", dropout) print("Optimizer :", optimizer_name) print(" Learning rate :", learning_rate) print(" Weight decay :", weight_decay) print(" Scheduler :", scheduler_name) print(" Batch sizes :", train_batch_size, valid_batch_size) print("Losses ") print(" Flag :", modification_flag_loss) print(" Type :", modification_type_loss) print(" Embedding :", embedding_loss) print(" Feature maps :", feature_maps_loss) print(" Mask :", mask_loss) print(" Bits :", bits_loss) optimizer = get_optimizer( optimizer_name, get_optimizable_parameters(model), learning_rate=learning_rate, weight_decay=weight_decay ) scheduler = get_scheduler( scheduler_name, optimizer, lr=learning_rate, num_epochs=num_epochs, batches_in_epoch=len(loaders["train"]) ) if isinstance(scheduler, CyclicLR): callbacks += [SchedulerCallback(mode="batch")] # model training runner = SupervisedRunner(input_key=required_features, output_key=None) runner.train( fp16=fp16, model=model, criterion=criterions_dict, optimizer=optimizer, scheduler=scheduler, callbacks=callbacks, loaders=loaders, logdir=os.path.join(log_dir, "main"), num_epochs=num_epochs, verbose=verbose, main_metric=main_metric, minimize_metric=main_metric_minimize, checkpoint_data={"cmd_args": vars(args)}, ) del optimizer, loaders, runner, callbacks best_checkpoint = os.path.join(log_dir, "main", "checkpoints", "best.pth") model_checkpoint = os.path.join(log_dir, f"{checkpoint_prefix}.pth") # Restore state of best model clean_checkpoint(best_checkpoint, model_checkpoint) # unpack_checkpoint(load_checkpoint(model_checkpoint), model=model) torch.cuda.empty_cache() gc.collect() if fine_tune: train_ds, valid_ds, train_sampler = get_datasets( data_dir=data_dir, augmentation="light", balance=balance, fast=fast, fold=fold, features=required_features, obliterate_p=obliterate_p, ) criterions_dict, loss_callbacks = get_criterions( modification_flag=modification_flag_loss, modification_type=modification_type_loss, embedding_loss=embedding_loss, feature_maps_loss=feature_maps_loss, mask_loss=mask_loss, bits_loss=bits_loss, num_epochs=fine_tune, mixup=False, cutmix=False, tsa=False, ) callbacks = ( default_callbacks + loss_callbacks + [ OptimizerCallback(accumulation_steps=accumulation_steps, decouple_weight_decay=False), HyperParametersCallback( hparam_dict={ "model": model_name, "scheduler": scheduler_name, "optimizer": optimizer_name, "augmentations": augmentations, "size": image_size[0], "weight_decay": weight_decay, } ), ] ) loaders = collections.OrderedDict() loaders["train"] = DataLoader( train_ds, batch_size=train_batch_size, num_workers=num_workers, pin_memory=True, drop_last=True, shuffle=train_sampler is None, sampler=train_sampler, ) loaders["valid"] = DataLoader(valid_ds, batch_size=valid_batch_size, num_workers=num_workers, pin_memory=True) print("Train session :", checkpoint_prefix) print(" FP16 mode :", fp16) print(" Fast mode :", args.fast) print(" Epochs :", num_epochs) print(" Workers :", num_workers) print(" Data dir :", data_dir) print(" Log dir :", log_dir) print(" Cache :", cache) print("Data ") print(" Augmentations :", augmentations) print(" Obliterate (%) :", obliterate_p) print(" Negative images:", negative_image_dir) print(" Train size :", len(loaders["train"]), "batches", len(train_ds), "samples") print(" Valid size :", len(loaders["valid"]), "batches", len(valid_ds), "samples") print(" Image size :", image_size) print(" Balance :", balance) print(" Mixup :", mixup) print(" CutMix :", cutmix) print(" TSA :", tsa) print("Model :", model_name) print(" Parameters :", count_parameters(model)) print(" Dropout :", dropout) print("Optimizer :", optimizer_name) print(" Learning rate :", learning_rate) print(" Weight decay :", weight_decay) print(" Scheduler :", scheduler_name) print(" Batch sizes :", train_batch_size, valid_batch_size) print("Losses ") print(" Flag :", modification_flag_loss) print(" Type :", modification_type_loss) print(" Embedding :", embedding_loss) print(" Feature maps :", feature_maps_loss) print(" Mask :", mask_loss) print(" Bits :", bits_loss) optimizer = get_optimizer( "SGD", get_optimizable_parameters(model), learning_rate=learning_rate, weight_decay=weight_decay ) scheduler = get_scheduler( "cos", optimizer, lr=learning_rate, num_epochs=fine_tune, batches_in_epoch=len(loaders["train"]) ) if isinstance(scheduler, CyclicLR): callbacks += [SchedulerCallback(mode="batch")] # model training runner = SupervisedRunner(input_key=required_features, output_key=None) runner.train( fp16=fp16, model=model, criterion=criterions_dict, optimizer=optimizer, scheduler=scheduler, callbacks=callbacks, loaders=loaders, logdir=os.path.join(log_dir, "finetune"), num_epochs=fine_tune, verbose=verbose, main_metric=main_metric, minimize_metric=main_metric_minimize, checkpoint_data={"cmd_args": vars(args)}, ) best_checkpoint = os.path.join(log_dir, "finetune", "checkpoints", "best.pth") model_checkpoint = os.path.join(log_dir, f"{checkpoint_prefix}_finetune.pth") clean_checkpoint(best_checkpoint, model_checkpoint) unpack_checkpoint(load_checkpoint(model_checkpoint), model=model) del optimizer, loaders, runner, callbacks
def run_stage_training(model: Union[TimmRgbModel, YCrCbModel], config: StageConfig, exp_config: ExperimenetConfig, experiment_dir: str): # Preparing model freeze_model(model, freeze_bn=config.freeze_bn) train_ds, valid_ds, train_sampler = get_datasets( data_dir=exp_config.data_dir, image_size=config.image_size, augmentation=config.augmentations, balance=config.balance, fast=config.fast, fold=exp_config.fold, features=model.required_features, obliterate_p=config.obliterate_p, ) criterions_dict, loss_callbacks = get_criterions( modification_flag=config.modification_flag_loss, modification_type=config.modification_type_loss, embedding_loss=config.embedding_loss, feature_maps_loss=config.feature_maps_loss, num_epochs=config.epochs, mixup=config.mixup, cutmix=config.cutmix, tsa=config.tsa, ) callbacks = loss_callbacks + [ OptimizerCallback(accumulation_steps=config.accumulation_steps, decouple_weight_decay=False), HyperParametersCallback( hparam_dict={ "model": exp_config.model_name, "scheduler": config.schedule, "optimizer": config.optimizer, "augmentations": config.augmentations, "size": config.image_size[0], "weight_decay": config.weight_decay, }), ] if config.show: callbacks += [ ShowPolarBatchesCallback(draw_predictions, metric="loss", minimize=True) ] loaders = collections.OrderedDict() loaders["train"] = DataLoader( train_ds, batch_size=config.train_batch_size, num_workers=exp_config.num_workers, pin_memory=True, drop_last=True, shuffle=train_sampler is None, sampler=train_sampler, ) loaders["valid"] = DataLoader(valid_ds, batch_size=config.valid_batch_size, num_workers=exp_config.num_workers, pin_memory=True) print("Stage :", config.stage_name) print(" FP16 mode :", config.fp16) print(" Fast mode :", config.fast) print(" Epochs :", config.epochs) print(" Workers :", exp_config.num_workers) print(" Data dir :", exp_config.data_dir) print(" Experiment dir :", experiment_dir) print("Data ") print(" Augmentations :", config.augmentations) print(" Obliterate (%) :", config.obliterate_p) print(" Negative images:", config.negative_image_dir) print(" Train size :", len(loaders["train"]), "batches", len(train_ds), "samples") print(" Valid size :", len(loaders["valid"]), "batches", len(valid_ds), "samples") print(" Image size :", config.image_size) print(" Balance :", config.balance) print(" Mixup :", config.mixup) print(" CutMix :", config.cutmix) print(" TSA :", config.tsa) print("Model :", exp_config.model_name) print(" Parameters :", count_parameters(model)) print(" Dropout :", exp_config.dropout) print("Optimizer :", config.optimizer) print(" Learning rate :", config.learning_rate) print(" Weight decay :", config.weight_decay) print(" Scheduler :", config.schedule) print(" Batch sizes :", config.train_batch_size, config.valid_batch_size) print("Losses ") print(" Flag :", config.modification_flag_loss) print(" Type :", config.modification_type_loss) print(" Embedding :", config.embedding_loss) print(" Feature maps :", config.feature_maps_loss) optimizer = get_optimizer( config.optimizer, get_optimizable_parameters(model), learning_rate=config.learning_rate, weight_decay=config.weight_decay, ) scheduler = get_scheduler( config.schedule, optimizer, lr=config.learning_rate, num_epochs=config.epochs, batches_in_epoch=len(loaders["train"]), ) if isinstance(scheduler, CyclicLR): callbacks += [SchedulerCallback(mode="batch")] # model training runner = SupervisedRunner(input_key=model.required_features, output_key=None) runner.train( fp16=config.fp16, model=model, criterion=criterions_dict, optimizer=optimizer, scheduler=scheduler, callbacks=callbacks, loaders=loaders, logdir=os.path.join(experiment_dir, config.stage_name), num_epochs=config.epochs, verbose=config.verbose, main_metric=config.main_metric, minimize_metric=config.main_metric_minimize, checkpoint_data={"config": config}, ) del optimizer, loaders, callbacks, runner best_checkpoint = os.path.join(experiment_dir, config.stage_name, "checkpoints", "best.pth") model_checkpoint = os.path.join(experiment_dir, f"{exp_config.checkpoint_prefix}.pth") clean_checkpoint(best_checkpoint, model_checkpoint) # Restore state of best model if config.restore_best: unpack_checkpoint(load_checkpoint(model_checkpoint), model=model) # Some memory cleanup torch.cuda.empty_cache() gc.collect()
def main(): parser = argparse.ArgumentParser() ########################################################################################### # Distributed-training related stuff parser.add_argument("--local_rank", type=int, default=0) ########################################################################################### parser.add_argument("-acc", "--accumulation-steps", type=int, default=1, help="Number of batches to process") parser.add_argument("--seed", type=int, default=42, help="Random seed") parser.add_argument("-v", "--verbose", action="store_true") parser.add_argument("--fast", action="store_true") parser.add_argument( "-dd", "--data-dir", type=str, help="Data directory for INRIA sattelite dataset", default=os.environ.get("INRIA_DATA_DIR"), ) parser.add_argument( "-dd-xview2", "--data-dir-xview2", type=str, required=False, help="Data directory for external xView2 dataset" ) parser.add_argument("-m", "--model", type=str, default="b6_unet32_s2", help="") parser.add_argument("-b", "--batch-size", type=int, default=8, help="Batch Size during training, e.g. -b 64") parser.add_argument("-e", "--epochs", type=int, default=100, help="Epoch to run") # parser.add_argument('-es', '--early-stopping', type=int, default=None, help='Maximum number of epochs without improvement') # parser.add_argument('-fe', '--freeze-encoder', type=int, default=0, help='Freeze encoder parameters for N epochs') # parser.add_argument('-ft', '--fine-tune', action='store_true') parser.add_argument("-lr", "--learning-rate", type=float, default=1e-3, help="Initial learning rate") parser.add_argument("-l", "--criterion", type=str, required=True, action="append", nargs="+", help="Criterion") parser.add_argument( "-l2", "--criterion2", type=str, required=False, action="append", nargs="+", help="Criterion for stride 2 mask", ) parser.add_argument( "-l4", "--criterion4", type=str, required=False, action="append", nargs="+", help="Criterion for stride 4 mask", ) parser.add_argument( "-l8", "--criterion8", type=str, required=False, action="append", nargs="+", help="Criterion for stride 8 mask", ) parser.add_argument( "-l16", "--criterion16", type=str, required=False, action="append", nargs="+", help="Criterion for stride 16 mask", ) parser.add_argument("-o", "--optimizer", default="RAdam", help="Name of the optimizer") parser.add_argument( "-c", "--checkpoint", type=str, default=None, help="Checkpoint filename to use as initial model weights" ) parser.add_argument("-w", "--workers", default=8, type=int, help="Num workers") parser.add_argument("-a", "--augmentations", default="hard", type=str, help="") parser.add_argument("-tm", "--train-mode", default="random", type=str, help="") parser.add_argument("--run-mode", default="fit_predict", type=str, help="") parser.add_argument("--transfer", default=None, type=str, help="") parser.add_argument("--fp16", action="store_true") parser.add_argument("--size", default=512, type=int) parser.add_argument("-s", "--scheduler", default="multistep", type=str, help="") parser.add_argument("-x", "--experiment", default=None, type=str, help="") parser.add_argument("-d", "--dropout", default=None, type=float, help="Dropout before head layer") parser.add_argument("--opl", action="store_true") parser.add_argument( "--warmup", default=0, type=int, help="Number of warmup epochs with reduced LR on encoder parameters" ) parser.add_argument("-wd", "--weight-decay", default=0, type=float, help="L2 weight decay") parser.add_argument("--show", action="store_true") parser.add_argument("--dsv", action="store_true") args = parser.parse_args() args.is_master = args.local_rank == 0 args.distributed = False fp16 = args.fp16 if "WORLD_SIZE" in os.environ: args.distributed = int(os.environ["WORLD_SIZE"]) > 1 args.world_size = int(os.environ["WORLD_SIZE"]) # args.world_size = torch.distributed.get_world_size() print("Initializing init_process_group", args.local_rank) torch.cuda.set_device(args.local_rank) torch.distributed.init_process_group(backend="nccl") print("Initialized init_process_group", args.local_rank) is_master = args.is_master | (not args.distributed) if args.distributed: distributed_params = {"rank": args.local_rank, "syncbn": True} if args.fp16: distributed_params["amp"] = True else: if args.fp16: distributed_params = {} distributed_params["amp"] = True else: distributed_params = False set_manual_seed(args.seed + args.local_rank) catalyst.utils.set_global_seed(args.seed + args.local_rank) torch.backends.cudnn.deterministic = False torch.backends.cudnn.benchmark = True data_dir = args.data_dir if data_dir is None: raise ValueError("--data-dir must be set") num_workers = args.workers num_epochs = args.epochs batch_size = args.batch_size learning_rate = args.learning_rate model_name = args.model optimizer_name = args.optimizer image_size = args.size, args.size fast = args.fast augmentations = args.augmentations train_mode = args.train_mode scheduler_name = args.scheduler experiment = args.experiment dropout = args.dropout online_pseudolabeling = args.opl criterions = args.criterion criterions2 = args.criterion2 criterions4 = args.criterion4 criterions8 = args.criterion8 criterions16 = args.criterion16 verbose = args.verbose show = args.show accumulation_steps = args.accumulation_steps weight_decay = args.weight_decay extra_data_xview2 = args.data_dir_xview2 run_train = num_epochs > 0 need_weight_mask = any(c[0] == "wbce" for c in criterions) custom_model_kwargs = {"full_size_mask": False} if dropout is not None: custom_model_kwargs["dropout"] = float(dropout) if any([criterions2, criterions4, criterions8, criterions16]): custom_model_kwargs["need_supervision_masks"] = True print("Enabling supervision masks") model: nn.Module = get_model(model_name, num_classes=16, **custom_model_kwargs).cuda() if args.transfer: transfer_checkpoint = fs.auto_file(args.transfer) print("Transfering weights from model checkpoint", transfer_checkpoint) checkpoint = load_checkpoint(transfer_checkpoint) pretrained_dict = checkpoint["model_state_dict"] transfer_weights(model, pretrained_dict) if args.checkpoint: checkpoint = load_checkpoint(fs.auto_file(args.checkpoint)) unpack_checkpoint(checkpoint, model=model) print("Loaded model weights from:", args.checkpoint) report_checkpoint(checkpoint) main_metric = "jaccard" current_time = datetime.now().strftime("%y%m%d_%H_%M") checkpoint_prefix = f"{current_time}_{args.model}" if fp16: checkpoint_prefix += "_fp16" if fast: checkpoint_prefix += "_fast" if online_pseudolabeling: checkpoint_prefix += "_opl" if extra_data_xview2: checkpoint_prefix += "_with_xview2" if experiment is not None: checkpoint_prefix = experiment default_callbacks = [ JaccardMetricPerImage( input_key=INPUT_MASK_KEY, output_key=OUTPUT_MASK_KEY, prefix="jaccard", inputs_to_labels=depth2mask, outputs_to_labels=decode_depth_mask, ), ] if is_master: default_callbacks += [ BestMetricCheckpointCallback(target_metric="jaccard", target_metric_minimize=False), HyperParametersCallback( hparam_dict={ "model": model_name, "scheduler": scheduler_name, "optimizer": optimizer_name, "augmentations": augmentations, "size": args.size, "weight_decay": weight_decay, "epochs": num_epochs, "dropout": None if dropout is None else float(dropout), } ), ] if show: visualize_inria_predictions = partial( draw_inria_predictions, image_key=INPUT_IMAGE_KEY, image_id_key=INPUT_IMAGE_ID_KEY, targets_key=INPUT_MASK_KEY, outputs_key=OUTPUT_MASK_KEY, inputs_to_labels=depth2mask, outputs_to_labels=decode_depth_mask, max_images=16, ) default_callbacks += [ ShowPolarBatchesCallback(visualize_inria_predictions, metric="accuracy", minimize=False), ShowPolarBatchesCallback(visualize_inria_predictions, metric="loss", minimize=True), ] train_ds, valid_ds, train_sampler = get_datasets( data_dir=data_dir, image_size=image_size, augmentation=augmentations, train_mode=train_mode, buildings_only=(train_mode == "tiles"), fast=fast, need_weight_mask=need_weight_mask, make_mask_target_fn=mask_to_ce_target, ) if extra_data_xview2 is not None: extra_train_ds, _ = get_xview2_extra_dataset( extra_data_xview2, image_size=image_size, augmentation=augmentations, fast=fast, need_weight_mask=need_weight_mask, ) weights = compute_sample_weight("balanced", [0] * len(train_ds) + [1] * len(extra_train_ds)) train_sampler = WeightedRandomSampler(weights, train_sampler.num_samples * 2) train_ds = train_ds + extra_train_ds print("Using extra data from xView2 with", len(extra_train_ds), "samples") if run_train: loaders = collections.OrderedDict() callbacks = default_callbacks.copy() criterions_dict = {} losses = [] ignore_index = None if online_pseudolabeling: ignore_index = UNLABELED_SAMPLE unlabeled_label = get_pseudolabeling_dataset( data_dir, include_masks=False, augmentation=None, image_size=image_size ) unlabeled_train = get_pseudolabeling_dataset( data_dir, include_masks=True, augmentation=augmentations, image_size=image_size ) if args.distributed: label_sampler = DistributedSampler(unlabeled_label, args.world_size, args.local_rank, shuffle=False) else: label_sampler = None loaders["infer"] = DataLoader( unlabeled_label, batch_size=batch_size // 2, num_workers=num_workers, pin_memory=True, sampler=label_sampler, drop_last=False, ) if train_sampler is not None: num_samples = 2 * train_sampler.num_samples else: num_samples = 2 * len(train_ds) weights = compute_sample_weight("balanced", [0] * len(train_ds) + [1] * len(unlabeled_label)) train_sampler = WeightedRandomSampler(weights, num_samples, replacement=True) train_ds = train_ds + unlabeled_train callbacks += [ BCEOnlinePseudolabelingCallback2d( unlabeled_train, pseudolabel_loader="infer", prob_threshold=0.7, output_key=OUTPUT_MASK_KEY, unlabeled_class=UNLABELED_SAMPLE, label_frequency=5, ) ] print("Using online pseudolabeling with ", len(unlabeled_label), "samples") valid_sampler = None if args.distributed: if train_sampler is not None: train_sampler = DistributedSamplerWrapper( train_sampler, args.world_size, args.local_rank, shuffle=True ) else: train_sampler = DistributedSampler(train_ds, args.world_size, args.local_rank, shuffle=True) valid_sampler = DistributedSampler(valid_ds, args.world_size, args.local_rank, shuffle=False) loaders["train"] = DataLoader( train_ds, batch_size=batch_size, num_workers=num_workers, pin_memory=True, drop_last=True, shuffle=train_sampler is None, sampler=train_sampler, ) loaders["valid"] = DataLoader( valid_ds, batch_size=batch_size, num_workers=num_workers, pin_memory=True, sampler=valid_sampler ) loss_callbacks, loss_criterions = get_criterions( criterions, criterions2, criterions4, criterions8, criterions16 ) callbacks += loss_callbacks optimizer = get_optimizer( optimizer_name, get_optimizable_parameters(model), learning_rate, weight_decay=weight_decay ) scheduler = get_scheduler( scheduler_name, optimizer, lr=learning_rate, num_epochs=num_epochs, batches_in_epoch=len(loaders["train"]) ) if isinstance(scheduler, (CyclicLR, OneCycleLRWithWarmup)): callbacks += [SchedulerCallback(mode="batch")] log_dir = os.path.join("runs", checkpoint_prefix) if is_master: os.makedirs(log_dir, exist_ok=False) config_fname = os.path.join(log_dir, f"{checkpoint_prefix}.json") with open(config_fname, "w") as f: train_session_args = vars(args) f.write(json.dumps(train_session_args, indent=2)) print("Train session :", checkpoint_prefix) print(" FP16 mode :", fp16) print(" Fast mode :", args.fast) print(" Train mode :", train_mode) print(" Epochs :", num_epochs) print(" Workers :", num_workers) print(" Data dir :", data_dir) print(" Log dir :", log_dir) print(" Augmentations :", augmentations) print(" Train size :", "batches", len(loaders["train"]), "dataset", len(train_ds)) print(" Valid size :", "batches", len(loaders["valid"]), "dataset", len(valid_ds)) print("Model :", model_name) print(" Parameters :", count_parameters(model)) print(" Image size :", image_size) print("Optimizer :", optimizer_name) print(" Learning rate :", learning_rate) print(" Batch size :", batch_size) print(" Criterion :", criterions) print(" Use weight mask:", need_weight_mask) if args.distributed: print("Distributed") print(" World size :", args.world_size) print(" Local rank :", args.local_rank) print(" Is master :", args.is_master) # model training runner = SupervisedRunner(input_key=INPUT_IMAGE_KEY, output_key=None, device="cuda") runner.train( fp16=distributed_params, model=model, criterion=loss_criterions, optimizer=optimizer, scheduler=scheduler, callbacks=callbacks, loaders=loaders, logdir=os.path.join(log_dir, "main"), num_epochs=num_epochs, verbose=verbose, main_metric=main_metric, minimize_metric=False, checkpoint_data={"cmd_args": vars(args)}, ) # Training is finished. Let's run predictions using best checkpoint weights if is_master: best_checkpoint = os.path.join(log_dir, "main", "checkpoints", "best.pth") model_checkpoint = os.path.join(log_dir, f"{checkpoint_prefix}.pth") clean_checkpoint(best_checkpoint, model_checkpoint) unpack_checkpoint(torch.load(model_checkpoint), model=model) mask = predict( model, read_inria_image("sample_color.jpg"), image_size=image_size, batch_size=args.batch_size ) mask = ((mask > 0) * 255).astype(np.uint8) name = os.path.join(log_dir, "sample_color.jpg") cv2.imwrite(name, mask)
def main(): parser = argparse.ArgumentParser() parser.add_argument("-acc", "--accumulation-steps", type=int, default=1, help="Number of batches to process") parser.add_argument("--seed", type=int, default=42, help="Random seed") parser.add_argument("--obliterate", type=float, default=0, help="Change of obliteration") parser.add_argument("-nid", "--negative-image-dir", type=str, default=None, help="Change of obliteration") parser.add_argument("-v", "--verbose", action="store_true") parser.add_argument("--fast", action="store_true") parser.add_argument("--cache", action="store_true") parser.add_argument("-dd", "--data-dir", type=str, default=os.environ.get("KAGGLE_2020_ALASKA2")) parser.add_argument("-b", "--batch-size", type=int, default=16, help="Batch Size during training, e.g. -b 64") parser.add_argument( "-wbs", "--warmup-batch-size", type=int, default=None, help="Batch Size during training, e.g. -b 64" ) parser.add_argument("-e", "--epochs", type=int, default=100, help="Epoch to run") parser.add_argument( "-es", "--early-stopping", type=int, default=None, help="Maximum number of epochs without improvement" ) parser.add_argument("-fe", "--freeze-encoder", action="store_true", help="Freeze encoder parameters for N epochs") parser.add_argument("-lr", "--learning-rate", type=float, default=1e-3, help="Initial learning rate") parser.add_argument( "-l", "--modification-flag-loss", type=str, default=None, action="append", nargs="+" # [["ce", 1.0]], ) parser.add_argument( "--modification-type-loss", type=str, default=None, action="append", nargs="+" # [["ce", 1.0]], ) parser.add_argument("--embedding-loss", type=str, default=None, action="append", nargs="+") # [["ce", 1.0]], parser.add_argument("--feature-maps-loss", type=str, default=None, action="append", nargs="+") # [["ce", 1.0]], parser.add_argument("--mask-loss", type=str, default=None, action="append", nargs="+") # [["ce", 1.0]], parser.add_argument("--bits-loss", type=str, default=None, action="append", nargs="+") # [["ce", 1.0]], parser.add_argument("-o", "--optimizer", default="RAdam", help="Name of the optimizer") parser.add_argument( "-c", "--checkpoint", type=str, default=None, help="Checkpoint filename to use as initial model weights" ) parser.add_argument("-w", "--workers", default=8, type=int, help="Num workers") parser.add_argument("-a", "--augmentations", default="safe", type=str, help="Level of image augmentations") parser.add_argument("--transfer", default=None, type=str, help="") parser.add_argument("--fp16", action="store_true") parser.add_argument("--mixup", action="store_true") parser.add_argument("--cutmix", action="store_true") parser.add_argument("--tsa", action="store_true") parser.add_argument("--fold", default=None, type=int) parser.add_argument("-s", "--scheduler", default=None, type=str, help="") parser.add_argument("-x", "--experiment", default=None, type=str, help="") parser.add_argument("-d", "--dropout", default=0, type=float, help="Dropout before head layer") parser.add_argument( "--warmup", default=0, type=int, help="Number of warmup epochs with reduced LR on encoder parameters" ) parser.add_argument( "--fine-tune", default=0, type=int, help="Number of warmup epochs with reduced LR on encoder parameters" ) parser.add_argument("-wd", "--weight-decay", default=0, type=float, help="L2 weight decay") parser.add_argument("--show", action="store_true") parser.add_argument("--balance", action="store_true") parser.add_argument("--freeze-bn", action="store_true") args = parser.parse_args() set_manual_seed(args.seed) assert ( args.modification_flag_loss or args.modification_type_loss or args.embedding_loss ), "At least one of losses must be set" modification_flag_loss = args.modification_flag_loss modification_type_loss = args.modification_type_loss embedding_loss = args.embedding_loss feature_maps_loss = args.feature_maps_loss mask_loss = args.mask_loss bits_loss = args.bits_loss data_dir = args.data_dir cache = args.cache num_workers = args.workers num_epochs = args.epochs learning_rate = args.learning_rate optimizer_name = args.optimizer fast = args.fast augmentations = args.augmentations fp16 = args.fp16 scheduler_name = args.scheduler experiment = args.experiment dropout = args.dropout verbose = args.verbose accumulation_steps = args.accumulation_steps weight_decay = args.weight_decay balance = args.balance freeze_bn = args.freeze_bn train_batch_size = args.batch_size mixup = args.mixup cutmix = args.cutmix tsa = args.tsa obliterate_p = args.obliterate negative_image_dir = args.negative_image_dir # Compute batch size for validation valid_batch_size = train_batch_size current_time = datetime.now().strftime("%b%d_%H_%M") main_metric = "loss" main_metric_minimize = True x_train = np.load(f"embeddings_x_train_Gf3_Hnrmishf2_Hnrmishf1_Kmishf0.npy") y_train = np.load(f"embeddings_y_train_Gf3_Hnrmishf2_Hnrmishf1_Kmishf0.npy") x_valid = np.load(f"embeddings_x_holdout_Gf3_Hnrmishf2_Hnrmishf1_Kmishf0.npy") y_valid = np.load(f"embeddings_y_holdout_Gf3_Hnrmishf2_Hnrmishf1_Kmishf0.npy") print(x_train.shape, x_valid.shape) print(np.bincount(y_train), np.bincount(y_valid)) train_ds = StackerDataset(x_train, y_train) valid_ds = StackerDataset(x_valid, y_valid) criterions_dict, loss_callbacks = get_criterions( modification_flag=modification_flag_loss, modification_type=modification_type_loss, embedding_loss=None, feature_maps_loss=None, mask_loss=None, bits_loss=None, num_epochs=num_epochs, mixup=mixup, cutmix=None, tsa=tsa, ) callbacks = loss_callbacks + [ OptimizerCallback(accumulation_steps=accumulation_steps, decouple_weight_decay=False), HyperParametersCallback( hparam_dict={ "scheduler": scheduler_name, "optimizer": optimizer_name, "augmentations": augmentations, "weight_decay": weight_decay, } ), ] loaders = collections.OrderedDict() loaders["train"] = DataLoader( train_ds, batch_size=train_batch_size, num_workers=num_workers, pin_memory=True, drop_last=True, shuffle=True ) loaders["valid"] = DataLoader(valid_ds, batch_size=valid_batch_size, num_workers=num_workers, pin_memory=True) model: nn.Module = StackingModel(x_train.shape[1], dropout=dropout).cuda() optimizer = get_optimizer( optimizer_name, get_optimizable_parameters(model), learning_rate=learning_rate, weight_decay=weight_decay ) scheduler = get_scheduler( scheduler_name, optimizer, lr=learning_rate, num_epochs=num_epochs, batches_in_epoch=len(loaders["train"]) ) if isinstance(scheduler, CyclicLR): callbacks += [SchedulerCallback(mode="batch")] checkpoint_prefix = f"{current_time}_stacking" if fp16: checkpoint_prefix += "_fp16" if fast: checkpoint_prefix += "_fast" if mixup: checkpoint_prefix += "_mixup" if cutmix: checkpoint_prefix += "_cutmix" if experiment is not None: checkpoint_prefix = experiment log_dir = os.path.join("runs", checkpoint_prefix) os.makedirs(log_dir, exist_ok=False) config_fname = os.path.join(log_dir, f"{checkpoint_prefix}.json") with open(config_fname, "w") as f: train_session_args = vars(args) f.write(json.dumps(train_session_args, indent=2)) print("Train session :", checkpoint_prefix) print(" Train size :", len(loaders["train"]), "batches", len(train_ds), "samples") print(" Valid size :", len(loaders["valid"]), "batches", len(valid_ds), "samples") print(" FP16 mode :", fp16) print(" Fast mode :", args.fast) print(" Epochs :", num_epochs) print(" Workers :", num_workers) print(" Data dir :", data_dir) print(" Log dir :", log_dir) print(" Cache :", cache) print("Data ") print(" Augmentations :", augmentations) print(" Obliterate (%) :", obliterate_p) print(" Negative images:", negative_image_dir) print(" Balance :", balance) print(" Mixup :", mixup) print(" CutMix :", cutmix) print(" TSA :", tsa) # print("Model :", model_name) print(" Parameters :", count_parameters(model)) print(" Dropout :", dropout) print("Optimizer :", optimizer_name) print(" Learning rate :", learning_rate) print(" Weight decay :", weight_decay) print(" Scheduler :", scheduler_name) print(" Batch sizes :", train_batch_size, valid_batch_size) print("Losses ") print(" Flag :", modification_flag_loss) print(" Type :", modification_type_loss) print(" Embedding :", embedding_loss) print(" Feature maps :", feature_maps_loss) print(" Mask :", mask_loss) print(" Bits :", bits_loss) # model training runner = SupervisedRunner(input_key=[INPUT_EMBEDDING_KEY], output_key=None) runner.train( fp16=fp16, model=model, criterion=criterions_dict, optimizer=optimizer, scheduler=scheduler, callbacks=callbacks, loaders=loaders, logdir=os.path.join(log_dir, "main"), num_epochs=num_epochs, verbose=verbose, main_metric=main_metric, minimize_metric=main_metric_minimize, checkpoint_data={"cmd_args": vars(args)}, ) del optimizer, loaders, runner, callbacks best_checkpoint = os.path.join(log_dir, "main", "checkpoints", "best.pth") model_checkpoint = os.path.join(log_dir, f"{checkpoint_prefix}.pth") # Restore state of best model clean_checkpoint(best_checkpoint, model_checkpoint)