Python Micrograph示例

示例#1

文件： protocol_summovie.py 项目： EyeSeeTea/scipion-web

 def createOutputStep(self):
     inputMovies = self.inputMovies.get()
     micSet = self._createSetOfMicrographs()
     micSet.copyInfo(inputMovies)
     for movie in self.inputMovies.get():
         mic = Micrograph()
         # All micrograph are copied to the 'extra' folder after each step
         mic.setFileName(self._getMicName(movie.getFileName()))
         micSet.append(mic)
     self._defineOutputs(outputMicrographs=micSet)

示例#2

文件： protocol_summovie.py 项目： denisfortun/scipion

 def createOutputStep(self):
     inputMovies = self.inputMovies.get()
     micSet = self._createSetOfMicrographs()
     micSet.copyInfo(inputMovies)
     for movie in self.inputMovies.get():
         mic = Micrograph()
         # All micrograph are copied to the 'extra' folder after each step
         mic.setFileName(self._getExtraPath(self._getNameExt(movie.getFileName(), "", "mrc")))
         micSet.append(mic)
     self._defineOutputs(outputMicrographs=micSet)

示例#3

文件： protocol_unblur.py 项目： azazellochg/scipion

    def createOutputStep(self):
        inputMovies = self.inputMovies.get()
        micSet = self._createSetOfMicrographs()
        micSet.copyInfo(inputMovies)

        for movie in inputMovies:
            mic = Micrograph()
            # All micrograph are copied to the 'extra' folder after each step
            mic.setFileName(self._getMicName(movie.getFileName()))
            micSet.append(mic)

        self._defineOutputs(outputMicrographs=micSet)
        self._defineSourceRelation(self.inputMovies, micSet)