示例#1
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    def test_excitation_preserving(self):
        """Test the excitation preserving wavefunction on a chemistry example."""

        driver = HDF5Driver(self.get_resource_path('test_driver_hdf5.hdf5'))
        fermionic_transformation = FermionicTransformation(
            qubit_mapping=QubitMappingType.PARITY, two_qubit_reduction=False)

        qubit_op, _ = fermionic_transformation.transform(driver)

        optimizer = SLSQP(maxiter=100)
        initial_state = HartreeFock(
            fermionic_transformation.molecule_info['num_orbitals'],
            fermionic_transformation.molecule_info['num_particles'],
            qubit_mapping=fermionic_transformation._qubit_mapping,
            two_qubit_reduction=fermionic_transformation._two_qubit_reduction)

        wavefunction = ExcitationPreserving(qubit_op.num_qubits,
                                            initial_state=initial_state)

        solver = VQE(var_form=wavefunction,
                     optimizer=optimizer,
                     quantum_instance=QuantumInstance(
                         BasicAer.get_backend('statevector_simulator'),
                         seed_simulator=aqua_globals.random_seed,
                         seed_transpiler=aqua_globals.random_seed))

        gsc = GroundStateEigensolver(fermionic_transformation, solver)

        result = gsc.solve(driver)

        self.assertAlmostEqual(result.energy, self.reference_energy, places=4)
示例#2
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    def test_hf_value(self, mapping):
        """ hf value test """
        try:
            driver = PySCFDriver(atom='Li .0 .0 .0; H .0 .0 1.6',
                                 unit=UnitsType.ANGSTROM,
                                 charge=0,
                                 spin=0,
                                 basis='sto3g')
        except QiskitChemistryError:
            self.skipTest('PYSCF driver does not appear to be installed')

        fermionic_transformation = FermionicTransformation(transformation=TransformationType.FULL,
                                                           qubit_mapping=mapping,
                                                           two_qubit_reduction=False,
                                                           freeze_core=False,
                                                           orbital_reduction=[])

        qubit_op, _ = fermionic_transformation.transform(driver)

        hrfo = HartreeFock(fermionic_transformation.molecule_info['num_orbitals'],
                           fermionic_transformation.molecule_info['num_particles'],
                           mapping.value,
                           two_qubit_reduction=False)
        qc = hrfo.construct_circuit('vector')
        exp = ~StateFn(qubit_op) @ StateFn(qc)
        hf_energy = exp.eval().real \
            + fermionic_transformation._nuclear_repulsion_energy

        self.assertAlmostEqual(fermionic_transformation._hf_energy, hf_energy, places=6)
示例#3
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    def setUp(self):
        super().setUp()
        try:
            self.molecule = "H 0.000000 0.000000 0.735000;H 0.000000 0.000000 0.000000"
            self.driver = PySCFDriver(atom=self.molecule,
                                      unit=UnitsType.ANGSTROM,
                                      charge=0,
                                      spin=0,
                                      basis='631g')
            self.fermionic_transformation = \
                FermionicTransformation(transformation=TransformationType.FULL,
                                        qubit_mapping=QubitMappingType.PARITY,
                                        two_qubit_reduction=True,
                                        freeze_core=True,
                                        orbital_reduction=[])
            self.qubit_op, _ = self.fermionic_transformation.transform(self.driver)

            self.reference_energy_pUCCD = -1.1434447924298028
            self.reference_energy_UCCD0 = -1.1476045878481704
            self.reference_energy_UCCD0full = -1.1515491334334347
            # reference energy of UCCSD/VQE with tapering everywhere
            self.reference_energy_UCCSD = -1.1516142309717594
            # reference energy of UCCSD/VQE when no tapering on excitations is used
            self.reference_energy_UCCSD_no_tap_exc = -1.1516142309717594
            # excitations for succ
            self.reference_singlet_double_excitations = [[0, 1, 4, 5], [0, 1, 4, 6], [0, 1, 4, 7],
                                                         [0, 2, 4, 6], [0, 2, 4, 7], [0, 3, 4, 7]]
            # groups for succ_full
            self.reference_singlet_groups = [[[0, 1, 4, 5]], [[0, 1, 4, 6], [0, 2, 4, 5]],
                                             [[0, 1, 4, 7], [0, 3, 4, 5]], [[0, 2, 4, 6]],
                                             [[0, 2, 4, 7], [0, 3, 4, 6]], [[0, 3, 4, 7]]]
        except QiskitChemistryError:
            self.skipTest('PYSCF driver does not appear to be installed')
示例#4
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    def setUp(self):
        super().setUp()
        try:
            self.driver = PySCFDriver(atom='Li .0 .0 .0; H .0 .0 1.6',
                                      unit=UnitsType.ANGSTROM,
                                      charge=0,
                                      spin=0,
                                      basis='sto3g')
        except QiskitChemistryError:
            self.skipTest('PYSCF driver does not appear to be installed')

        self.fermionic_transformation = FermionicTransformation(
            transformation=TransformationType.FULL,
            qubit_mapping=QubitMappingType.PARITY,
            two_qubit_reduction=True,
            freeze_core=True,
            orbital_reduction=[],
            z2symmetry_reduction='auto')

        self.qubit_op, _ = self.fermionic_transformation.transform(self.driver)

        self.z2_symmetries = self.fermionic_transformation.molecule_info.pop(
            'z2_symmetries')

        self.reference_energy = -7.882096489442
    def setUp(self):
        super().setUp()
        self.reference_energy = -1.1373060356951838

        self.seed = 700
        aqua_globals.random_seed = self.seed

        self.driver = HDF5Driver(
            self.get_resource_path('test_driver_hdf5.hdf5'))
        fermionic_transformation = FermionicTransformation(
            qubit_mapping=QubitMappingType.PARITY, two_qubit_reduction=False)

        self.qubit_op, _ = fermionic_transformation.transform(self.driver)
        self.fermionic_transformation = fermionic_transformation

        self.optimizer = SLSQP(maxiter=100)
        initial_state = HartreeFock(
            fermionic_transformation.molecule_info['num_orbitals'],
            fermionic_transformation.molecule_info['num_particles'],
            qubit_mapping=fermionic_transformation._qubit_mapping,
            two_qubit_reduction=fermionic_transformation._two_qubit_reduction)
        self.var_form = UCCSD(
            num_orbitals=fermionic_transformation.
            molecule_info['num_orbitals'],
            num_particles=fermionic_transformation.
            molecule_info['num_particles'],
            initial_state=initial_state,
            qubit_mapping=fermionic_transformation._qubit_mapping,
            two_qubit_reduction=fermionic_transformation._two_qubit_reduction)
    def setUp(self):
        super().setUp()

        self.driver1 = HDF5Driver(
            hdf5_input=self.get_resource_path('test_oovqe_h4.hdf5'))
        self.driver2 = HDF5Driver(
            hdf5_input=self.get_resource_path('test_oovqe_lih.hdf5'))
        self.driver3 = HDF5Driver(
            hdf5_input=self.get_resource_path('test_oovqe_h4_uhf.hdf5'))

        self.energy1_rotation = -3.0104
        self.energy1 = -2.77  # energy of the VQE with pUCCD ansatz and LBFGSB optimizer
        self.energy2 = -7.70
        self.energy3 = -2.50
        self.initial_point1 = [
            0.039374, -0.47225463, -0.61891996, 0.02598386, 0.79045546,
            -0.04134567, 0.04944946, -0.02971617, -0.00374005, 0.77542149
        ]

        self.seed = 50

        self.optimizer = COBYLA(maxiter=1)
        self.transformation1 = \
            FermionicTransformation(qubit_mapping=FermionicQubitMappingType.JORDAN_WIGNER,
                                    two_qubit_reduction=False)
        self.transformation2 = \
            FermionicTransformation(qubit_mapping=FermionicQubitMappingType.JORDAN_WIGNER,
                                    two_qubit_reduction=False,
                                    freeze_core=True)

        self.quantum_instance = QuantumInstance(
            BasicAer.get_backend('statevector_simulator'),
            shots=1,
            seed_simulator=self.seed,
            seed_transpiler=self.seed)
示例#7
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    def test_orbital_reduction(self):
        """ orbital reduction test --- Remove virtual orbital just
            for test purposes (not sensible!)
        """
        fermionic_transformation = FermionicTransformation(
            transformation=TransformationType.FULL,
            qubit_mapping=QubitMappingType.JORDAN_WIGNER,
            two_qubit_reduction=False,
            freeze_core=False,
            orbital_reduction=[-1])

        # get dummy aux operator
        qmolecule = self.driver.run()
        fer_op = FermionicOperator(h1=qmolecule.one_body_integrals,
                                   h2=qmolecule.two_body_integrals)
        dummy = fer_op.total_particle_number()
        expected = (I ^ I) - 0.5 * (I ^ Z) - 0.5 * (Z ^ I)

        qubit_op, aux_ops = fermionic_transformation.transform(
            self.driver, [dummy])
        self._validate_vars(fermionic_transformation)
        self._validate_info(fermionic_transformation, num_orbitals=2)
        self._validate_input_object(qubit_op, num_qubits=2, num_paulis=4)

        # the first six aux_ops are added automatically, ours is the 7th one
        self.assertEqual(aux_ops[6], expected)
示例#8
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    def test_uccsd_hf_qUCCSD(self):
        """ uccsd tapering test using all double excitations """

        fermionic_transformation = FermionicTransformation(
            transformation=TransformationType.FULL,
            qubit_mapping=QubitMappingType.PARITY,
            two_qubit_reduction=True,
            freeze_core=True,
            orbital_reduction=[],
            z2symmetry_reduction='auto')

        qubit_op, _ = fermionic_transformation.transform(self.driver)

        # optimizer
        optimizer = SLSQP(maxiter=100)

        # initial state
        init_state = HartreeFock(
            num_orbitals=fermionic_transformation.
            molecule_info['num_orbitals'],
            qubit_mapping=fermionic_transformation._qubit_mapping,
            two_qubit_reduction=fermionic_transformation._two_qubit_reduction,
            num_particles=fermionic_transformation.
            molecule_info['num_particles'],
            sq_list=fermionic_transformation.molecule_info['z2_symmetries'].
            sq_list)

        var_form = UCCSD(
            num_orbitals=fermionic_transformation.
            molecule_info['num_orbitals'],
            num_particles=fermionic_transformation.
            molecule_info['num_particles'],
            active_occupied=None,
            active_unoccupied=None,
            initial_state=init_state,
            qubit_mapping=fermionic_transformation._qubit_mapping,
            two_qubit_reduction=fermionic_transformation._two_qubit_reduction,
            num_time_slices=1,
            z2_symmetries=fermionic_transformation.
            molecule_info['z2_symmetries'],
            shallow_circuit_concat=False,
            method_doubles='ucc',
            excitation_type='sd',
            skip_commute_test=True)

        solver = VQE(
            var_form=var_form,
            optimizer=optimizer,
            quantum_instance=QuantumInstance(
                backend=BasicAer.get_backend('statevector_simulator')))

        raw_result = solver.compute_minimum_eigenvalue(qubit_op, None)
        result = fermionic_transformation.interpret(raw_result)

        self.assertAlmostEqual(result.energy,
                               self.reference_energy_UCCSD,
                               places=6)
    def test_output(self):
        """ output test """
        fermionic_transformation = \
            FermionicTransformation(transformation=TransformationType.FULL,
                                    qubit_mapping=QubitMappingType.JORDAN_WIGNER,
                                    two_qubit_reduction=False,
                                    freeze_core=False,
                                    orbital_reduction=[])

        qubit_op, _ = fermionic_transformation.transform(self.driver)
        self._validate_vars(fermionic_transformation)
        self._validate_info(fermionic_transformation)
        self._validate_input_object(qubit_op)
示例#10
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    def test_freeze_core(self):
        """ freeze core test """
        fermionic_transformation = \
            FermionicTransformation(transformation=TransformationType.FULL,
                                    qubit_mapping=QubitMappingType.PARITY,
                                    two_qubit_reduction=False,
                                    freeze_core=True,
                                    orbital_reduction=[])

        qubit_op, _ = fermionic_transformation.transform(self.driver)
        self._validate_vars(fermionic_transformation, energy_shift=-7.7962196)
        self._validate_info(fermionic_transformation, num_particles=[1, 1], num_orbitals=10)
        self._validate_input_object(qubit_op, num_qubits=10, num_paulis=276)
示例#11
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    def test_parity(self):
        """ parity test """
        fermionic_transformation = \
            FermionicTransformation(transformation=TransformationType.FULL,
                                    qubit_mapping=QubitMappingType.PARITY,
                                    two_qubit_reduction=True,
                                    freeze_core=False,
                                    orbital_reduction=[])

        qubit_op, _ = fermionic_transformation.transform(self.driver)
        self._validate_vars(fermionic_transformation)
        self._validate_info(fermionic_transformation, actual_two_qubit_reduction=True)
        self._validate_input_object(qubit_op, num_qubits=10)
    def test_particle_hole(self):
        """ particle hole test """
        fermionic_transformation = FermionicTransformation(
            transformation=TransformationType.PARTICLE_HOLE,
            qubit_mapping=QubitMappingType.JORDAN_WIGNER,
            two_qubit_reduction=False,
            freeze_core=False,
            orbital_reduction=[])

        qubit_op, _ = fermionic_transformation.transform(self.driver)
        self._validate_vars(fermionic_transformation, ph_energy_shift=-1.83696799)
        self._validate_info(fermionic_transformation)
        self._validate_input_object(qubit_op)
    def test_bravyi_kitaev(self):
        """ bravyi kitaev test """
        fermionic_transformation = FermionicTransformation(
            transformation=TransformationType.FULL,
            qubit_mapping=QubitMappingType.BRAVYI_KITAEV,
            two_qubit_reduction=False,
            freeze_core=False,
            orbital_reduction=[])

        qubit_op, _ = fermionic_transformation.transform(self.driver)
        self._validate_vars(fermionic_transformation)
        self._validate_info(fermionic_transformation)
        self._validate_input_object(qubit_op)
    def test_freeze_core(self):
        """ freeze core test -- Should be in effect a no-op for H2 """
        fermionic_transformation = FermionicTransformation(
            transformation=TransformationType.FULL,
            qubit_mapping=QubitMappingType.JORDAN_WIGNER,
            two_qubit_reduction=False,
            freeze_core=True,
            orbital_reduction=[])

        qubit_op, _ = fermionic_transformation.transform(self.driver)
        self._validate_vars(fermionic_transformation)
        self._validate_info(fermionic_transformation)
        self._validate_input_object(qubit_op)
    def test_jordan_wigner_2q(self):
        """ jordan wigner 2q test """
        fermionic_transformation = FermionicTransformation(
            transformation=TransformationType.FULL,
            qubit_mapping=QubitMappingType.JORDAN_WIGNER,
            two_qubit_reduction=True,
            freeze_core=False,
            orbital_reduction=[])

        qubit_op, _ = fermionic_transformation.transform(self.driver)
        self._validate_vars(fermionic_transformation)
        # Reported effective 2 qubit reduction should be false
        self._validate_info(fermionic_transformation, actual_two_qubit_reduction=False)
        self._validate_input_object(qubit_op)
    def setUp(self):
        super().setUp()
        try:
            self.driver = PySCFDriver(atom='H .0 .0 .0; H .0 .0 0.735',
                                      unit=UnitsType.ANGSTROM,
                                      charge=0,
                                      spin=0,
                                      basis='sto3g')
        except QiskitChemistryError:
            self.skipTest('PYSCF driver does not appear to be installed')

        self.reference_energy = -1.137306

        self.transformation = FermionicTransformation(
            qubit_mapping=QubitMappingType.JORDAN_WIGNER)
示例#17
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    def test_freeze_core_all_reduction_ph(self):
        """ freeze core all reduction ph test """
        fermionic_transformation = \
            FermionicTransformation(transformation=TransformationType.PARTICLE_HOLE,
                                    qubit_mapping=QubitMappingType.PARITY,
                                    two_qubit_reduction=True,
                                    freeze_core=True,
                                    orbital_reduction=[-2, -1])

        qubit_op, _ = fermionic_transformation.transform(self.driver)
        self._validate_vars(fermionic_transformation, energy_shift=-7.7962196,
                            ph_energy_shift=-1.05785247)
        self._validate_info(fermionic_transformation, num_particles=[1, 1], num_orbitals=6,
                            actual_two_qubit_reduction=True)
        self._validate_input_object(qubit_op, num_qubits=4, num_paulis=52)
    def test_freeze_core_all_reduction(self):
        """ freeze core all reduction test """
        fermionic_transformation = \
            FermionicTransformation(transformation=TransformationType.FULL,
                                    qubit_mapping=QubitMappingType.PARITY,
                                    two_qubit_reduction=True,
                                    freeze_core=True,
                                    orbital_reduction=[-3, -2])

        qubit_op, _ = fermionic_transformation.transform(self.driver)
        self._validate_vars(fermionic_transformation, energy_shift=-7.7962196)
        self._validate_info(fermionic_transformation,
                            num_particles=(1, 1),
                            num_orbitals=6,
                            actual_two_qubit_reduction=True)
        self._validate_input_object(qubit_op, num_qubits=4, num_paulis=100)
    def test_potential_interface(self):
        """Tests potential interface."""
        seed = 50
        aqua_globals.random_seed = seed

        stretch = partial(Molecule.absolute_distance, atom_pair=(1, 0))
        # H-H molecule near equilibrium geometry
        m = Molecule(geometry=[
            ['H', [0., 0., 0.]],
            ['H', [1., 0., 0.]],
        ],
                     degrees_of_freedom=[stretch],
                     masses=[1.6735328E-27, 1.6735328E-27])

        f_t = FermionicTransformation()
        driver = PySCFDriver(molecule=m)

        f_t.transform(driver)

        solver = NumPyMinimumEigensolver()

        me_gss = GroundStateEigensolver(f_t, solver)
        # Run BOPESSampler with exact eigensolution
        points = np.arange(0.45, 5.3, 0.3)
        sampler = BOPESSampler(gss=me_gss)

        res = sampler.sample(driver, points)

        # Testing Potential interface
        pot = MorsePotential(m)
        pot.fit(res.points, res.energies)

        np.testing.assert_array_almost_equal([pot.alpha, pot.r_0],
                                             [2.235, 0.720],
                                             decimal=3)
        np.testing.assert_array_almost_equal([pot.d_e, pot.m_shift],
                                             [0.2107, -1.1419],
                                             decimal=3)
示例#20
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    def setUp(self):
        super().setUp()

        try:
            self.driver = PySCFDriver(atom='H .0 .0 .0; H .0 .0 0.735',
                                      unit=UnitsType.ANGSTROM,
                                      basis='sto3g')
        except QiskitChemistryError:
            self.skipTest('PYSCF driver does not appear to be installed')
            return

        self.expected = -1.85727503

        self.transformation = FermionicTransformation()
示例#21
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    def _run_driver(driver,
                    transformation=TransformationType.FULL,
                    qubit_mapping=QubitMappingType.JORDAN_WIGNER,
                    two_qubit_reduction=False,
                    freeze_core=True):

        fermionic_transformation = \
            FermionicTransformation(transformation=transformation,
                                    qubit_mapping=qubit_mapping,
                                    two_qubit_reduction=two_qubit_reduction,
                                    freeze_core=freeze_core,
                                    orbital_reduction=[])

        solver = NumPyMinimumEigensolver()

        gsc = GroundStateEigensolver(fermionic_transformation, solver)

        result = gsc.solve(driver)
        return result
    def setUp(self):
        super().setUp()
        aqua_globals.random_seed = 8
        try:
            self.driver = PySCFDriver(atom='H .0 .0 .0; H .0 .0 0.75',
                                      unit=UnitsType.ANGSTROM,
                                      charge=0,
                                      spin=0,
                                      basis='sto3g')
        except QiskitChemistryError:
            self.skipTest('PYSCF driver does not appear to be installed')

        self.reference_energies = [-1.8427016, -1.8427016 + 0.5943372, -1.8427016 + 0.95788352,
                                   -1.8427016 + 1.5969296]
        self.transformation = \
            FermionicTransformation(qubit_mapping=FermionicQubitMappingType.JORDAN_WIGNER)
        solver = NumPyEigensolver()
        self.ref = solver
        self.quantum_instance = QuantumInstance(BasicAer.get_backend('statevector_simulator'),
                                                seed_transpiler=90, seed_simulator=12)
    def setUp(self):
        super().setUp()
        try:
            self.driver = PySCFDriver(atom='H .0 .0 .0; H .0 .0 0.735',
                                      unit=UnitsType.ANGSTROM,
                                      charge=0,
                                      spin=0,
                                      basis='sto3g')
        except QiskitChemistryError:
            self.skipTest('PYSCF driver does not appear to be installed')

        self.reference_energy = -1.137306

        self.transformation = \
            FermionicTransformation(qubit_mapping=FermionicQubitMappingType.JORDAN_WIGNER)

        self.seed = 50
        self.quantum_instance = QuantumInstance(
            BasicAer.get_backend('statevector_simulator'),
            shots=1,
            seed_simulator=self.seed,
            seed_transpiler=self.seed)

        self._vqe_uccsd_factory = VQEUCCSDFactory(self.quantum_instance)
class TestOOVQE(QiskitChemistryTestCase):
    """ Test OOVQE Ground State Calculation. """
    def setUp(self):
        super().setUp()

        self.driver1 = HDF5Driver(
            hdf5_input=self.get_resource_path('test_oovqe_h4.hdf5'))
        self.driver2 = HDF5Driver(
            hdf5_input=self.get_resource_path('test_oovqe_lih.hdf5'))
        self.driver3 = HDF5Driver(
            hdf5_input=self.get_resource_path('test_oovqe_h4_uhf.hdf5'))

        self.energy1_rotation = -3.0104
        self.energy1 = -2.77  # energy of the VQE with pUCCD ansatz and LBFGSB optimizer
        self.energy2 = -7.70
        self.energy3 = -2.50
        self.initial_point1 = [
            0.039374, -0.47225463, -0.61891996, 0.02598386, 0.79045546,
            -0.04134567, 0.04944946, -0.02971617, -0.00374005, 0.77542149
        ]

        self.seed = 50

        self.optimizer = COBYLA(maxiter=1)
        self.transformation1 = \
            FermionicTransformation(qubit_mapping=FermionicQubitMappingType.JORDAN_WIGNER,
                                    two_qubit_reduction=False)
        self.transformation2 = \
            FermionicTransformation(qubit_mapping=FermionicQubitMappingType.JORDAN_WIGNER,
                                    two_qubit_reduction=False,
                                    freeze_core=True)

        self.quantum_instance = QuantumInstance(
            BasicAer.get_backend('statevector_simulator'),
            shots=1,
            seed_simulator=self.seed,
            seed_transpiler=self.seed)

    def test_orbital_rotations(self):
        """ Test that orbital rotations are performed correctly. """

        optimizer = COBYLA(maxiter=1)
        solver = VQEUCCSDFactory(quantum_instance=self.quantum_instance,
                                 optimizer=optimizer,
                                 excitation_type='d',
                                 same_spin_doubles=False,
                                 method_doubles='pucc')

        calc = OrbitalOptimizationVQE(self.transformation1,
                                      solver,
                                      iterative_oo=False,
                                      initial_point=self.initial_point1)

        algo_result = calc.solve(self.driver1)
        self.assertAlmostEqual(algo_result.computed_electronic_energy,
                               self.energy1_rotation, 4)

    def test_oovqe(self):
        """ Test the simultaneous optimization of orbitals and ansatz parameters with OOVQE using
        BasicAer's statevector_simulator. """

        optimizer = COBYLA(maxiter=3, rhobeg=0.01)
        solver = VQEUCCSDFactory(quantum_instance=self.quantum_instance,
                                 optimizer=optimizer,
                                 excitation_type='d',
                                 same_spin_doubles=False,
                                 method_doubles='pucc')

        calc = OrbitalOptimizationVQE(self.transformation1,
                                      solver,
                                      iterative_oo=False,
                                      initial_point=self.initial_point1)

        algo_result = calc.solve(self.driver1)
        self.assertLessEqual(algo_result.computed_electronic_energy,
                             self.energy1, 4)

    def test_iterative_oovqe(self):
        """ Test the iterative OOVQE using BasicAer's statevector_simulator. """

        optimizer = COBYLA(maxiter=2, rhobeg=0.01)
        solver = VQEUCCSDFactory(quantum_instance=self.quantum_instance,
                                 optimizer=optimizer,
                                 excitation_type='d',
                                 same_spin_doubles=False,
                                 method_doubles='pucc')

        calc = OrbitalOptimizationVQE(self.transformation1,
                                      solver,
                                      iterative_oo=True,
                                      initial_point=self.initial_point1,
                                      iterative_oo_iterations=2)

        algo_result = calc.solve(self.driver1)
        self.assertLessEqual(algo_result.computed_electronic_energy,
                             self.energy1)

    def test_oovqe_with_frozen_core(self):
        """ Test the OOVQE with frozen core approximation. """

        optimizer = COBYLA(maxiter=2, rhobeg=1)
        solver = VQEUCCSDFactory(quantum_instance=self.quantum_instance,
                                 optimizer=optimizer,
                                 excitation_type='d',
                                 same_spin_doubles=False,
                                 method_doubles='pucc')

        calc = OrbitalOptimizationVQE(self.transformation2,
                                      solver,
                                      iterative_oo=False)

        algo_result = calc.solve(self.driver2)
        self.assertLessEqual(
            algo_result.computed_electronic_energy +
            self.transformation2._energy_shift +
            self.transformation2._nuclear_repulsion_energy, self.energy2)

    def test_oovqe_with_unrestricted_hf(self):
        """ Test the OOVQE with unrestricted HF method. """

        optimizer = COBYLA(maxiter=2, rhobeg=0.01)
        solver = VQEUCCSDFactory(quantum_instance=self.quantum_instance,
                                 optimizer=optimizer,
                                 excitation_type='d',
                                 same_spin_doubles=False,
                                 method_doubles='pucc')

        calc = OrbitalOptimizationVQE(self.transformation1,
                                      solver,
                                      iterative_oo=False)

        algo_result = calc.solve(self.driver3)
        self.assertLessEqual(algo_result.computed_electronic_energy,
                             self.energy3)

    def test_oovqe_with_unsupported_varform(self):
        """ Test the OOVQE with unsupported varform. """

        optimizer = COBYLA(maxiter=2, rhobeg=0.01)
        solver = VQE(var_form=RealAmplitudes(),
                     optimizer=optimizer,
                     quantum_instance=self.quantum_instance)

        calc = OrbitalOptimizationVQE(self.transformation1,
                                      solver,
                                      iterative_oo=False)

        with self.assertRaises(AquaError):
            calc.solve(self.driver3)

    def test_oovqe_with_vqe_uccsd(self):
        """ Test the OOVQE with VQE + UCCSD instead of factory. """

        optimizer = COBYLA(maxiter=3, rhobeg=0.01)
        solver_factory = VQEUCCSDFactory(
            quantum_instance=self.quantum_instance,
            optimizer=optimizer,
            excitation_type='d',
            same_spin_doubles=False,
            method_doubles='pucc')
        self.transformation1.transform(self.driver1)
        solver = solver_factory.get_solver(self.transformation1)

        calc = OrbitalOptimizationVQE(self.transformation1,
                                      solver,
                                      iterative_oo=False,
                                      initial_point=self.initial_point1)

        algo_result = calc.solve(self.driver1)
        self.assertLessEqual(algo_result.computed_electronic_energy,
                             self.energy1, 4)
示例#25
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class TestSymmetries(QiskitChemistryTestCase):
    """Test for symmetry processing."""
    def setUp(self):
        super().setUp()
        try:
            self.driver = PySCFDriver(atom='Li .0 .0 .0; H .0 .0 1.6',
                                      unit=UnitsType.ANGSTROM,
                                      charge=0,
                                      spin=0,
                                      basis='sto3g')
        except QiskitChemistryError:
            self.skipTest('PYSCF driver does not appear to be installed')

        self.fermionic_transformation = FermionicTransformation(
            transformation=TransformationType.FULL,
            qubit_mapping=QubitMappingType.PARITY,
            two_qubit_reduction=True,
            freeze_core=True,
            orbital_reduction=[],
            z2symmetry_reduction='auto')

        self.qubit_op, _ = self.fermionic_transformation.transform(self.driver)

        self.z2_symmetries = self.fermionic_transformation.molecule_info.pop(
            'z2_symmetries')

        self.reference_energy = -7.882096489442

    def test_symmetries(self):
        """ symmetries test """
        labels = [symm.to_label() for symm in self.z2_symmetries.symmetries]
        self.assertSequenceEqual(labels, ['ZIZIZIZI', 'ZZIIZZII'])

    def test_sq_paulis(self):
        """ sq paulis test """
        labels = [sq.to_label() for sq in self.z2_symmetries.sq_paulis]
        self.assertSequenceEqual(labels, ['IIIIIIXI', 'IIIIIXII'])

    def test_cliffords(self):
        """ clifford test """
        self.assertEqual(2, len(self.z2_symmetries.cliffords))

    def test_sq_list(self):
        """ sq list test """
        self.assertSequenceEqual(self.z2_symmetries.sq_list, [1, 2])

    def test_tapered_op(self):
        """ tapered op test """

        optimizer = SLSQP(maxiter=1000)
        init_state = HartreeFock(
            num_orbitals=self.fermionic_transformation.
            molecule_info['num_orbitals'],
            qubit_mapping=self.fermionic_transformation._qubit_mapping,
            two_qubit_reduction=self.fermionic_transformation.
            _two_qubit_reduction,
            num_particles=self.fermionic_transformation.
            molecule_info['num_particles'],
            sq_list=self.z2_symmetries.sq_list)

        var_form = UCCSD(
            num_orbitals=self.fermionic_transformation.
            molecule_info['num_orbitals'],
            num_particles=self.fermionic_transformation.
            molecule_info['num_particles'],
            active_occupied=None,
            active_unoccupied=None,
            initial_state=init_state,
            qubit_mapping=self.fermionic_transformation._qubit_mapping,
            two_qubit_reduction=self.fermionic_transformation.
            _two_qubit_reduction,
            num_time_slices=1,
            z2_symmetries=self.z2_symmetries)

        solver = VQE(
            var_form=var_form,
            optimizer=optimizer,
            quantum_instance=QuantumInstance(
                backend=BasicAer.get_backend('statevector_simulator')))

        gsc = GroundStateEigensolver(self.fermionic_transformation, solver)

        result = gsc.solve(self.driver)

        self.assertAlmostEqual(result.energy, self.reference_energy, places=6)
    def test_h2_bopes_sampler(self):
        """Test BOPES Sampler on H2"""
        seed = 50
        aqua_globals.random_seed = seed

        # Molecule
        dof = partial(Molecule.absolute_distance, atom_pair=(1, 0))
        m = Molecule(geometry=[['H', [0., 0., 1.]], ['H', [0., 0.45, 1.]]],
                     degrees_of_freedom=[dof])

        f_t = FermionicTransformation()
        driver = PySCFDriver(molecule=m)

        qubitop, _ = f_t.transform(driver)

        # Quantum Instance:
        shots = 1
        backend = 'statevector_simulator'
        quantum_instance = QuantumInstance(BasicAer.get_backend(backend),
                                           shots=shots)
        quantum_instance.run_config.seed_simulator = seed
        quantum_instance.compile_config['seed_transpiler'] = seed

        # Variational form
        i_state = HartreeFock(
            num_orbitals=f_t._molecule_info['num_orbitals'],
            qubit_mapping=f_t._qubit_mapping,
            two_qubit_reduction=f_t._two_qubit_reduction,
            num_particles=f_t._molecule_info['num_particles'],
            sq_list=f_t._molecule_info['z2_symmetries'].sq_list)
        var_form = RealAmplitudes(qubitop.num_qubits,
                                  reps=1,
                                  entanglement='full',
                                  skip_unentangled_qubits=False)
        var_form.compose(i_state, front=True)

        # Classical optimizer:
        # Analytic Quantum Gradient Descent (AQGD) (with Epochs)
        aqgd_max_iter = [10] + [1] * 100
        aqgd_eta = [1e0] + [1.0 / k for k in range(1, 101)]
        aqgd_momentum = [0.5] + [0.5] * 100
        optimizer = AQGD(maxiter=aqgd_max_iter,
                         eta=aqgd_eta,
                         momentum=aqgd_momentum,
                         tol=1e-6,
                         averaging=4)

        # Min Eigensolver: VQE
        solver = VQE(var_form=var_form,
                     optimizer=optimizer,
                     quantum_instance=quantum_instance,
                     expectation=PauliExpectation())

        me_gss = GroundStateEigensolver(f_t, solver)

        # BOPES sampler
        sampler = BOPESSampler(gss=me_gss)

        # absolute internuclear distance in Angstrom
        points = [0.7, 1.0, 1.3]
        results = sampler.sample(driver, points)

        points_run = results.points
        energies = results.energies

        np.testing.assert_array_almost_equal(points_run, [0.7, 1.0, 1.3])
        np.testing.assert_array_almost_equal(
            energies, [-1.13618945, -1.10115033, -1.03518627], decimal=2)
class TestMESGSCCalculation(QiskitChemistryTestCase):
    """ Test MinimumEigensovler ground state calculation """
    def setUp(self):
        super().setUp()
        try:
            self.driver = PySCFDriver(atom='H .0 .0 .0; H .0 .0 0.735',
                                      unit=UnitsType.ANGSTROM,
                                      charge=0,
                                      spin=0,
                                      basis='sto3g')
        except QiskitChemistryError:
            self.skipTest('PYSCF driver does not appear to be installed')

        self.reference_energy = -1.137306

        self.transformation = FermionicTransformation(
            qubit_mapping=QubitMappingType.JORDAN_WIGNER)

    def test_npme(self):
        """ Test NumPyMinimumEigensolver """
        solver = NumPyMinimumEigensolverFactory()
        calc = GroundStateEigensolver(self.transformation, solver)
        res = calc.solve(self.driver)
        self.assertAlmostEqual(res.energy, self.reference_energy, places=6)

    def test_vqe_uccsd(self):
        """ Test VQE UCCSD case """
        solver = VQEUCCSDFactory(
            QuantumInstance(BasicAer.get_backend('statevector_simulator')))
        calc = GroundStateEigensolver(self.transformation, solver)
        res = calc.solve(self.driver)
        self.assertAlmostEqual(res.energy, self.reference_energy, places=6)

    def _setup_evaluation_operators(self):
        # first we run a ground state calculation
        solver = VQEUCCSDFactory(
            QuantumInstance(BasicAer.get_backend('statevector_simulator')))
        calc = GroundStateEigensolver(self.transformation, solver)
        res = calc.solve(self.driver)

        # now we decide that we want to evaluate another operator
        # for testing simplicity, we just use some pre-constructed auxiliary operators
        _, aux_ops = self.transformation.transform(self.driver)
        return calc, res, aux_ops

    def test_eval_op_single(self):
        """ Test evaluating a single additional operator """
        calc, res, aux_ops = self._setup_evaluation_operators()
        # we filter the list because in this test we test a single operator evaluation
        add_aux_op = aux_ops[0][0]

        # now we have the ground state calculation evaluate it
        add_aux_op_res = calc.evaluate_operators(res.raw_result.eigenstate,
                                                 add_aux_op)
        self.assertIsInstance(add_aux_op_res[0], complex)
        self.assertAlmostEqual(add_aux_op_res[0].real, 2, places=6)

    def test_eval_op_list(self):
        """ Test evaluating a list of additional operator """
        calc, res, aux_ops = self._setup_evaluation_operators()
        # we filter the list because of simplicity
        expected_results = {
            'number of particles': 2,
            's^2': 0,
            'magnetization': 0
        }
        add_aux_op = aux_ops[0:3]

        # now we have the ground state calculation evaluate them
        add_aux_op_res = calc.evaluate_operators(res.raw_result.eigenstate,
                                                 add_aux_op)
        self.assertIsInstance(add_aux_op_res, list)
        # in this list we require that the order of the results remains unchanged
        for idx, expected in enumerate(expected_results.values()):
            self.assertAlmostEqual(add_aux_op_res[idx][0].real,
                                   expected,
                                   places=6)

    def test_eval_op_dict(self):
        """ Test evaluating a dict of additional operator """
        calc, res, aux_ops = self._setup_evaluation_operators()
        # we filter the list because of simplicity
        expected_results = {
            'number of particles': 2,
            's^2': 0,
            'magnetization': 0
        }
        add_aux_op = aux_ops[0:3]
        # now we convert it into a dictionary
        add_aux_op = dict(zip(expected_results.keys(), add_aux_op))

        # now we have the ground state calculation evaluate them
        add_aux_op_res = calc.evaluate_operators(res.raw_result.eigenstate,
                                                 add_aux_op)
        self.assertIsInstance(add_aux_op_res, dict)
        for name, expected in expected_results.items():
            self.assertAlmostEqual(add_aux_op_res[name][0].real,
                                   expected,
                                   places=6)
示例#28
0
class TestUCCSDHartreeFock(QiskitChemistryTestCase):
    """Test for these aqua extensions."""

    def setUp(self):
        super().setUp()
        try:
            self.molecule = "H 0.000000 0.000000 0.735000;H 0.000000 0.000000 0.000000"
            self.driver = PySCFDriver(atom=self.molecule,
                                      unit=UnitsType.ANGSTROM,
                                      charge=0,
                                      spin=0,
                                      basis='631g')
            self.fermionic_transformation = \
                FermionicTransformation(transformation=TransformationType.FULL,
                                        qubit_mapping=QubitMappingType.PARITY,
                                        two_qubit_reduction=True,
                                        freeze_core=True,
                                        orbital_reduction=[])
            self.qubit_op, _ = self.fermionic_transformation.transform(self.driver)

            self.reference_energy_pUCCD = -1.1434447924298028
            self.reference_energy_UCCD0 = -1.1476045878481704
            self.reference_energy_UCCD0full = -1.1515491334334347
            # reference energy of UCCSD/VQE with tapering everywhere
            self.reference_energy_UCCSD = -1.1516142309717594
            # reference energy of UCCSD/VQE when no tapering on excitations is used
            self.reference_energy_UCCSD_no_tap_exc = -1.1516142309717594
            # excitations for succ
            self.reference_singlet_double_excitations = [[0, 1, 4, 5], [0, 1, 4, 6], [0, 1, 4, 7],
                                                         [0, 2, 4, 6], [0, 2, 4, 7], [0, 3, 4, 7]]
            # groups for succ_full
            self.reference_singlet_groups = [[[0, 1, 4, 5]], [[0, 1, 4, 6], [0, 2, 4, 5]],
                                             [[0, 1, 4, 7], [0, 3, 4, 5]], [[0, 2, 4, 6]],
                                             [[0, 2, 4, 7], [0, 3, 4, 6]], [[0, 3, 4, 7]]]
        except QiskitChemistryError:
            self.skipTest('PYSCF driver does not appear to be installed')

    def test_uccsd_hf_qpUCCD(self):
        """ paired uccd test """

        optimizer = SLSQP(maxiter=100)

        initial_state = HartreeFock(
            self.fermionic_transformation.molecule_info['num_orbitals'],
            self.fermionic_transformation.molecule_info['num_particles'],
            qubit_mapping=self.fermionic_transformation._qubit_mapping,
            two_qubit_reduction=self.fermionic_transformation._two_qubit_reduction)

        var_form = UCCSD(
            num_orbitals=self.fermionic_transformation.molecule_info['num_orbitals'],
            num_particles=self.fermionic_transformation.molecule_info['num_particles'],
            active_occupied=None, active_unoccupied=None,
            initial_state=initial_state,
            qubit_mapping=self.fermionic_transformation._qubit_mapping,
            two_qubit_reduction=self.fermionic_transformation._two_qubit_reduction,
            num_time_slices=1,
            shallow_circuit_concat=False,
            method_doubles='pucc',
            excitation_type='d'
        )

        solver = VQE(var_form=var_form, optimizer=optimizer,
                     quantum_instance=QuantumInstance(
                         backend=BasicAer.get_backend('statevector_simulator')))

        gsc = GroundStateEigensolver(self.fermionic_transformation, solver)

        result = gsc.solve(self.driver)

        self.assertAlmostEqual(result.total_energies[0], self.reference_energy_pUCCD, places=6)

    def test_uccsd_hf_qUCCD0(self):
        """ singlet uccd test """

        optimizer = SLSQP(maxiter=100)
        initial_state = HartreeFock(
            self.fermionic_transformation.molecule_info['num_orbitals'],
            self.fermionic_transformation.molecule_info['num_particles'],
            qubit_mapping=self.fermionic_transformation._qubit_mapping,
            two_qubit_reduction=self.fermionic_transformation._two_qubit_reduction)

        var_form = UCCSD(
            num_orbitals=self.fermionic_transformation.molecule_info['num_orbitals'],
            num_particles=self.fermionic_transformation.molecule_info['num_particles'],
            active_occupied=None, active_unoccupied=None,
            initial_state=initial_state,
            qubit_mapping=self.fermionic_transformation._qubit_mapping,
            two_qubit_reduction=self.fermionic_transformation._two_qubit_reduction,
            num_time_slices=1,
            shallow_circuit_concat=False,
            method_doubles='succ',
            excitation_type='d'
        )

        solver = VQE(var_form=var_form, optimizer=optimizer,
                     quantum_instance=QuantumInstance(
                         backend=BasicAer.get_backend('statevector_simulator')))

        gsc = GroundStateEigensolver(self.fermionic_transformation, solver)

        result = gsc.solve(self.driver)

        self.assertAlmostEqual(result.total_energies[0], self.reference_energy_UCCD0, places=6)

    def test_uccsd_hf_qUCCD0full(self):
        """ singlet full uccd test """

        optimizer = SLSQP(maxiter=100)

        initial_state = HartreeFock(
            self.fermionic_transformation.molecule_info['num_orbitals'],
            self.fermionic_transformation.molecule_info['num_particles'],
            qubit_mapping=self.fermionic_transformation._qubit_mapping,
            two_qubit_reduction=self.fermionic_transformation._two_qubit_reduction)

        var_form = UCCSD(
            num_orbitals=self.fermionic_transformation.molecule_info['num_orbitals'],
            num_particles=self.fermionic_transformation.molecule_info['num_particles'],
            active_occupied=None, active_unoccupied=None,
            initial_state=initial_state,
            qubit_mapping=self.fermionic_transformation._qubit_mapping,
            two_qubit_reduction=self.fermionic_transformation._two_qubit_reduction,
            num_time_slices=1,
            shallow_circuit_concat=False,
            method_doubles='succ_full',
            excitation_type='d'
        )

        solver = VQE(var_form=var_form, optimizer=optimizer,
                     quantum_instance=QuantumInstance(
                         backend=BasicAer.get_backend('statevector_simulator')))

        gsc = GroundStateEigensolver(self.fermionic_transformation, solver)

        result = gsc.solve(self.driver)
        self.assertAlmostEqual(result.total_energies[0], self.reference_energy_UCCD0full, places=6)

    def test_uccsd_hf_qUCCSD(self):
        """ uccsd tapering test using all double excitations """

        fermionic_transformation = FermionicTransformation(
            transformation=TransformationType.FULL,
            qubit_mapping=QubitMappingType.PARITY,
            two_qubit_reduction=True,
            freeze_core=True,
            orbital_reduction=[],
            z2symmetry_reduction='auto'
        )

        qubit_op, _ = fermionic_transformation.transform(self.driver)

        # optimizer
        optimizer = SLSQP(maxiter=100)

        # initial state
        init_state = HartreeFock(
            num_orbitals=fermionic_transformation.molecule_info['num_orbitals'],
            qubit_mapping=fermionic_transformation._qubit_mapping,
            two_qubit_reduction=fermionic_transformation._two_qubit_reduction,
            num_particles=fermionic_transformation.molecule_info['num_particles'],
            sq_list=fermionic_transformation.molecule_info['z2_symmetries'].sq_list)

        var_form = UCCSD(
            num_orbitals=fermionic_transformation.molecule_info['num_orbitals'],
            num_particles=fermionic_transformation.molecule_info['num_particles'],
            active_occupied=None, active_unoccupied=None,
            initial_state=init_state,
            qubit_mapping=fermionic_transformation._qubit_mapping,
            two_qubit_reduction=fermionic_transformation._two_qubit_reduction,
            num_time_slices=1,
            z2_symmetries=fermionic_transformation.molecule_info['z2_symmetries'],
            shallow_circuit_concat=False,
            method_doubles='ucc',
            excitation_type='sd',
            skip_commute_test=True)

        solver = VQE(var_form=var_form, optimizer=optimizer,
                     quantum_instance=QuantumInstance(
                         backend=BasicAer.get_backend('statevector_simulator')))

        raw_result = solver.compute_minimum_eigenvalue(qubit_op, None)
        result = fermionic_transformation.interpret(raw_result)

        self.assertAlmostEqual(result.total_energies[0], self.reference_energy_UCCSD, places=6)

    def test_uccsd_hf_excitations(self):
        """ uccsd tapering test using all double excitations """

        # initial state
        init_state = HartreeFock(
            num_orbitals=self.fermionic_transformation.molecule_info['num_orbitals'],
            qubit_mapping=self.fermionic_transformation._qubit_mapping,
            two_qubit_reduction=self.fermionic_transformation._two_qubit_reduction,
            num_particles=self.fermionic_transformation.molecule_info['num_particles'],
            sq_list=self.fermionic_transformation.molecule_info['z2_symmetries'].sq_list)

        # check singlet excitations
        var_form = UCCSD(
            num_orbitals=self.fermionic_transformation.molecule_info['num_orbitals'],
            num_particles=self.fermionic_transformation.molecule_info['num_particles'],
            active_occupied=None, active_unoccupied=None,
            initial_state=init_state,
            qubit_mapping=self.fermionic_transformation._qubit_mapping,
            two_qubit_reduction=self.fermionic_transformation._two_qubit_reduction,
            num_time_slices=1,
            z2_symmetries=self.fermionic_transformation.molecule_info['z2_symmetries'],
            shallow_circuit_concat=False,
            method_doubles='succ',
            excitation_type='d',
            skip_commute_test=True)

        double_excitations_singlet = var_form._double_excitations
        res = TestUCCSDHartreeFock.excitation_lists_comparator(
            double_excitations_singlet, self.reference_singlet_double_excitations)
        self.assertEqual(res, True)

        # check grouped singlet excitations
        var_form = UCCSD(
            num_orbitals=self.fermionic_transformation.molecule_info['num_orbitals'],
            num_particles=self.fermionic_transformation.molecule_info['num_particles'],
            active_occupied=None, active_unoccupied=None,
            initial_state=init_state,
            qubit_mapping=self.fermionic_transformation._qubit_mapping,
            two_qubit_reduction=self.fermionic_transformation._two_qubit_reduction,
            num_time_slices=1,
            z2_symmetries=self.fermionic_transformation.molecule_info['z2_symmetries'],
            shallow_circuit_concat=False,
            method_doubles='succ_full',
            excitation_type='d',
            skip_commute_test=True)

        double_excitations_singlet_grouped = var_form._double_excitations_grouped
        res_groups = TestUCCSDHartreeFock.group_excitation_lists_comparator(
            double_excitations_singlet_grouped, self.reference_singlet_groups)
        self.assertEqual(res_groups, True)

    @staticmethod
    def pop_el_when_matched(list1, list2):
        """
        Compares if in list1 and list2 one of excitations is the same (regardless of permutations of
        its elements). When same excitation is found, it returns the 2 lists without that excitation
        .

        Args:
            list1 (list): list of excitations (e.g. [[0, 2, 4, 6], [0, 2, 4, 7]])
            list2 (list): list of excitations

        Returns:
            list: list1 with one popped element if match was found
            list: list2 with one popped element if match was found
        """
        counter = 0
        for i, exc1 in enumerate(list1):
            for j, exc2 in enumerate(list2):
                for ind1 in exc1:
                    for ind2 in exc2:
                        if ind1 == ind2:
                            counter += 1
                if counter == len(exc1) and counter == len(exc2):
                    list1.pop(i)
                    list2.pop(j)
                    break
            break
        return list1, list2

    @staticmethod
    def excitation_lists_comparator(list1, list2):
        """
        Compares if list1 and list2 contain same excitations (regardless of permutations of
        its elements). Only works provided all indices for an excitation are different.

        Args:
            list1 (list): list of excitations (e.g. [[0, 2, 4, 6], [0, 2, 4, 7]])
            list2 (list): list of excitations

        Returns:
            bool: True or False, if list1 and list2 contain the same excitations
        """
        if len(list1) != len(list2):
            return False

        number_el = len(list1)

        for _ in range(number_el):
            list1, list2 = TestUCCSDHartreeFock.pop_el_when_matched(list1, list2)

        return bool(len(list1) or len(list2) in [0])

    @staticmethod
    def group_excitation_lists_comparator(glist1, glist2):
        """
        Compares if list1 and list2 contain same excitations (regardless of permutations of
        its elements). Only works provided all indices for an excitation are different.

        Args:
            glist1 (list): list of excitations (e.g. [[0, 2, 4, 6], [0, 2, 4, 7]])
            glist2 (list): list of excitations

        Returns:
            bool: True or False, if list1 and list2 contain the same excitations
        """
        if len(glist1) != len(glist2):
            return False

        number_groups = len(glist1)
        counter = 0
        for _, gr1 in enumerate(glist1):
            for _, gr2 in enumerate(glist2):
                res = TestUCCSDHartreeFock.excitation_lists_comparator(gr1, gr2)
                if res is True:
                    counter += 1

        return bool(counter == number_groups)
示例#29
0
class TestGroundStateEigensolver(QiskitChemistryTestCase):
    """ Test GroundStateEigensolver """
    def setUp(self):
        super().setUp()
        try:
            self.driver = PySCFDriver(atom='H .0 .0 .0; H .0 .0 0.735',
                                      unit=UnitsType.ANGSTROM,
                                      charge=0,
                                      spin=0,
                                      basis='sto3g')
        except QiskitChemistryError:
            self.skipTest('PYSCF driver does not appear to be installed')

        self.reference_energy = -1.137306

        self.transformation = FermionicTransformation(
            qubit_mapping=FermionicQubitMappingType.JORDAN_WIGNER)

    def test_npme(self):
        """ Test NumPyMinimumEigensolver """
        solver = NumPyMinimumEigensolverFactory()
        calc = GroundStateEigensolver(self.transformation, solver)
        res = calc.solve(self.driver)
        self.assertAlmostEqual(res.total_energies[0],
                               self.reference_energy,
                               places=6)

    def test_npme_with_default_filter(self):
        """ Test NumPyMinimumEigensolver with default filter """
        solver = NumPyMinimumEigensolverFactory(
            use_default_filter_criterion=True)
        calc = GroundStateEigensolver(self.transformation, solver)
        res = calc.solve(self.driver)
        self.assertAlmostEqual(res.total_energies[0],
                               self.reference_energy,
                               places=6)

    def test_vqe_uccsd(self):
        """ Test VQE UCCSD case """
        solver = VQEUCCSDFactory(
            QuantumInstance(BasicAer.get_backend('statevector_simulator')))
        calc = GroundStateEigensolver(self.transformation, solver)
        res = calc.solve(self.driver)
        self.assertAlmostEqual(res.total_energies[0],
                               self.reference_energy,
                               places=6)

    def test_aux_ops_reusability(self):
        """ Test that the auxiliary operators can be reused """
        # Regression test against #1475
        solver = NumPyMinimumEigensolverFactory()
        calc = GroundStateEigensolver(self.transformation, solver)

        modes = 4
        h_1 = np.eye(modes, dtype=np.complex)
        h_2 = np.zeros((modes, modes, modes, modes))
        aux_ops = [FermionicOperator(h_1, h_2)]
        aux_ops_copy = copy.deepcopy(aux_ops)

        _ = calc.solve(self.driver, aux_ops)
        assert all([a == b for a, b in zip(aux_ops, aux_ops_copy)])

    def _setup_evaluation_operators(self):
        # first we run a ground state calculation
        solver = VQEUCCSDFactory(
            QuantumInstance(BasicAer.get_backend('statevector_simulator')))
        calc = GroundStateEigensolver(self.transformation, solver)
        res = calc.solve(self.driver)

        # now we decide that we want to evaluate another operator
        # for testing simplicity, we just use some pre-constructed auxiliary operators
        _, aux_ops = self.transformation.transform(self.driver)
        return calc, res, aux_ops

    def test_eval_op_single(self):
        """ Test evaluating a single additional operator """
        calc, res, aux_ops = self._setup_evaluation_operators()
        # we filter the list because in this test we test a single operator evaluation
        add_aux_op = aux_ops[0][0]

        # now we have the ground state calculation evaluate it
        add_aux_op_res = calc.evaluate_operators(res.raw_result.eigenstate,
                                                 add_aux_op)
        self.assertIsInstance(add_aux_op_res[0], complex)
        self.assertAlmostEqual(add_aux_op_res[0].real, 2, places=6)

    def test_eval_op_single_none(self):
        """ Test evaluating a single `None` operator """
        calc, res, _ = self._setup_evaluation_operators()
        # we filter the list because in this test we test a single operator evaluation
        add_aux_op = None

        # now we have the ground state calculation evaluate it
        add_aux_op_res = calc.evaluate_operators(res.raw_result.eigenstate,
                                                 add_aux_op)
        self.assertIsNone(add_aux_op_res)

    def test_eval_op_list(self):
        """ Test evaluating a list of additional operators """
        calc, res, aux_ops = self._setup_evaluation_operators()
        # we filter the list because of simplicity
        expected_results = {
            'number of particles': 2,
            's^2': 0,
            'magnetization': 0
        }
        add_aux_op = aux_ops[0:3]

        # now we have the ground state calculation evaluate them
        add_aux_op_res = calc.evaluate_operators(res.raw_result.eigenstate,
                                                 add_aux_op)
        self.assertIsInstance(add_aux_op_res, list)
        # in this list we require that the order of the results remains unchanged
        for idx, expected in enumerate(expected_results.values()):
            self.assertAlmostEqual(add_aux_op_res[idx][0].real,
                                   expected,
                                   places=6)

    def test_eval_op_list_none(self):
        """ Test evaluating a list of additional operators incl. `None` """
        calc, res, aux_ops = self._setup_evaluation_operators()
        # we filter the list because of simplicity
        expected_results = {
            'number of particles': 2,
            's^2': 0,
            'magnetization': 0
        }
        add_aux_op = aux_ops[0:3] + [None]

        # now we have the ground state calculation evaluate them
        add_aux_op_res = calc.evaluate_operators(res.raw_result.eigenstate,
                                                 add_aux_op)
        self.assertIsInstance(add_aux_op_res, list)
        # in this list we require that the order of the results remains unchanged
        for idx, expected in enumerate(expected_results.values()):
            self.assertAlmostEqual(add_aux_op_res[idx][0].real,
                                   expected,
                                   places=6)
        self.assertIsNone(add_aux_op_res[-1])

    def test_eval_op_dict(self):
        """ Test evaluating a dict of additional operators """
        calc, res, aux_ops = self._setup_evaluation_operators()
        # we filter the list because of simplicity
        expected_results = {
            'number of particles': 2,
            's^2': 0,
            'magnetization': 0
        }
        add_aux_op = aux_ops[0:3]
        # now we convert it into a dictionary
        add_aux_op = dict(zip(expected_results.keys(), add_aux_op))

        # now we have the ground state calculation evaluate them
        add_aux_op_res = calc.evaluate_operators(res.raw_result.eigenstate,
                                                 add_aux_op)
        self.assertIsInstance(add_aux_op_res, dict)
        for name, expected in expected_results.items():
            self.assertAlmostEqual(add_aux_op_res[name][0].real,
                                   expected,
                                   places=6)

    def test_eval_op_dict_none(self):
        """ Test evaluating a dict of additional operators incl. `None` """
        calc, res, aux_ops = self._setup_evaluation_operators()
        # we filter the list because of simplicity
        expected_results = {
            'number of particles': 2,
            's^2': 0,
            'magnetization': 0
        }
        add_aux_op = aux_ops[0:3]
        # now we convert it into a dictionary
        add_aux_op = dict(zip(expected_results.keys(), add_aux_op))
        add_aux_op['None'] = None

        # now we have the ground state calculation evaluate them
        add_aux_op_res = calc.evaluate_operators(res.raw_result.eigenstate,
                                                 add_aux_op)
        self.assertIsInstance(add_aux_op_res, dict)
        for name, expected in expected_results.items():
            self.assertAlmostEqual(add_aux_op_res[name][0].real,
                                   expected,
                                   places=6)
        self.assertIsNone(add_aux_op_res['None'])