def from_xml_element(self, instrument_dom):
"""
Read in data from XML
@param xml_str: text to read the data from
"""
#Peak selection
self.DataPeakSelectionType = BaseScriptElement.getStringElement(instrument_dom, "peak_selection_type")
#Peak from/to pixels
self.DataPeakPixels = [BaseScriptElement.getIntElement(instrument_dom, "from_peak_pixels"),
BaseScriptElement.getIntElement(instrument_dom, "to_peak_pixels")]
#data metadata
_tthd_value = BaseScriptElement.getStringElement(instrument_dom, "tthd_value")
if (_tthd_value == ''):
_tthd_value = 'N/A'
self.tthd_value = _tthd_value
_ths_value = BaseScriptElement.getStringElement(instrument_dom, "ths_value")
if (_ths_value == ''):
_ths_value = 'N/A'
self.ths_value = _ths_value
#low resolution range
self.data_x_range_flag = BaseScriptElement.getBoolElement(instrument_dom, "x_range_flag",
default=DataSets.data_x_range_flag)
self.data_x_range = [BaseScriptElement.getIntElement(instrument_dom, "x_min_pixel"),
BaseScriptElement.getIntElement(instrument_dom, "x_max_pixel")]
self.norm_x_range_flag = BaseScriptElement.getBoolElement(instrument_dom, "norm_x_range_flag",
default=DataSets.norm_x_range_flag)
self.norm_x_range = [BaseScriptElement.getIntElement(instrument_dom, "norm_x_min"),
BaseScriptElement.getIntElement(instrument_dom, "norm_x_max")]
#discrete selection string
self.DataPeakDiscreteSelection = BaseScriptElement.getStringElement(instrument_dom, "peak_discrete_selection")
#background flag
self.DataBackgroundFlag = BaseScriptElement.getBoolElement(instrument_dom,
"background_flag",
default=DataSets.DataBackgroundFlag)
#background from/to pixels
self.DataBackgroundRoi = [BaseScriptElement.getIntElement(instrument_dom, "back_roi1_from"),
BaseScriptElement.getIntElement(instrument_dom, "back_roi1_to"),
BaseScriptElement.getIntElement(instrument_dom, "back_roi2_from"),
BaseScriptElement.getIntElement(instrument_dom, "back_roi2_to")]
#from TOF and to TOF
self.TofRangeFlag = BaseScriptElement.getBoolElement(instrument_dom, "tof_range_flag",
default=DataSets.TofRangeFlag)
self.DataTofRange = [BaseScriptElement.getFloatElement(instrument_dom, "from_tof_range"),
BaseScriptElement.getFloatElement(instrument_dom, "to_tof_range")]
self.data_files = BaseScriptElement.getIntList(instrument_dom, "data_sets")
#with or without norm
self.NormFlag = BaseScriptElement.getBoolElement(instrument_dom, "norm_flag",
default=DataSets.NormFlag)
#Peak from/to pixels
self.NormPeakPixels = [BaseScriptElement.getIntElement(instrument_dom, "norm_from_peak_pixels"),
BaseScriptElement.getIntElement(instrument_dom, "norm_to_peak_pixels")]
#background flag
self.NormBackgroundFlag = BaseScriptElement.getBoolElement(instrument_dom,
"norm_background_flag",
default=DataSets.NormBackgroundFlag)
#background from/to pixels
self.NormBackgroundRoi = [BaseScriptElement.getIntElement(instrument_dom, "norm_from_back_pixels"),
BaseScriptElement.getIntElement(instrument_dom, "norm_to_back_pixels")]
self.norm_file = BaseScriptElement.getIntElement(instrument_dom, "norm_dataset")
# Q cut
self.q_min = BaseScriptElement.getFloatElement(instrument_dom, "q_min", default=DataSets.q_min)
self.q_step = BaseScriptElement.getFloatElement(instrument_dom, "q_step", default=DataSets.q_step)
self.auto_q_binning = BaseScriptElement.getBoolElement(instrument_dom, "auto_q_binning", default=False)
# Angle offset
self.angle_offset = BaseScriptElement.getFloatElement(instrument_dom, "angle_offset", default=DataSets.angle_offset)
self.angle_offset_error = BaseScriptElement.getFloatElement(instrument_dom, "angle_offset_error", default=DataSets.angle_offset_error)
#scaling factor file and options
self.scaling_factor_file = BaseScriptElement.getStringElement(instrument_dom, "scaling_factor_file")
self.slits_width_flag = BaseScriptElement.getBoolElement(instrument_dom, "slits_width_flag")
self.scaling_factor_file_flag = BaseScriptElement.getBoolElement(instrument_dom, "scaling_factor_flag")
#incident medium selected
if BaseScriptElement.getStringList(instrument_dom, "incident_medium_list") != []:
self.incident_medium_list = BaseScriptElement.getStringList(instrument_dom, "incident_medium_list")
self.incident_medium_index_selected = BaseScriptElement.getIntElement(instrument_dom, "incident_medium_index_selected")
else:
self.incident_medium_list = ['H2O']
self.incident_medium_index_selected = 0
#fourth column (precision)
self.fourth_column_flag = BaseScriptElement.getBoolElement(instrument_dom, "fourth_column_flag")
self.fourth_column_dq0 = BaseScriptElement.getFloatElement(instrument_dom, "fourth_column_dq0")
self.fourth_column_dq_over_q = BaseScriptElement.getFloatElement(instrument_dom, "fourth_column_dq_over_q")
def from_xml(self, xml_str):
"""
Read in data from XML
@param xml_str: text to read the data from
"""
self.reset()
dom = xml.dom.minidom.parseString(xml_str)
instrument_dom = dom.getElementsByTagName("Instrument")[0]
self.nx_pixels = BaseScriptElement.getIntElement(
instrument_dom, "nx_pixels", default=ReductionOptions.nx_pixels)
self.ny_pixels = BaseScriptElement.getIntElement(
instrument_dom, "ny_pixels", default=ReductionOptions.ny_pixels)
self.instrument_name = BaseScriptElement.getStringElement(
instrument_dom, "name")
self.pixel_size = BaseScriptElement.getFloatElement(
instrument_dom, "pixel_size", default=ReductionOptions.pixel_size)
self.sample_detector_distance = BaseScriptElement.getFloatElement(
instrument_dom,
"sample_det_dist",
default=ReductionOptions.sample_detector_distance)
self.detector_offset = BaseScriptElement.getFloatElement(
instrument_dom,
"detector_offset",
default=ReductionOptions.detector_offset)
self.wavelength = BaseScriptElement.getFloatElement(
instrument_dom, "wavelength", default=ReductionOptions.wavelength)
self.wavelength_spread = BaseScriptElement.getFloatElement(
instrument_dom,
"wavelength_spread",
default=ReductionOptions.wavelength_spread)
self.solid_angle_corr = BaseScriptElement.getBoolElement(
instrument_dom,
"solid_angle_corr",
default=ReductionOptions.solid_angle_corr)
# Output directory
self.use_data_directory = BaseScriptElement.getBoolElement(
instrument_dom,
"UseDataDirectory",
default=ReductionOptions.use_data_directory)
self.output_directory = BaseScriptElement.getStringElement(
instrument_dom,
"OutputDirectory",
default=ReductionOptions.output_directory)
# Dark current
self.dark_current_corr = BaseScriptElement.getBoolElement(
instrument_dom,
"dark_current_corr",
default=ReductionOptions.dark_current_corr)
self.dark_current_data = BaseScriptElement.getStringElement(
instrument_dom, "dark_current_data")
self.n_q_bins = BaseScriptElement.getIntElement(
instrument_dom, "n_q_bins", default=ReductionOptions.n_q_bins)
self.n_sub_pix = BaseScriptElement.getIntElement(
instrument_dom, "n_sub_pix", default=ReductionOptions.n_sub_pix)
self.log_binning = BaseScriptElement.getBoolElement(
instrument_dom,
"log_binning",
default=ReductionOptions.log_binning)
self.align_log_with_decades = BaseScriptElement.getBoolElement(
instrument_dom,
"align_log_with_decades",
default=ReductionOptions.align_log_with_decades)
self.error_weighting = BaseScriptElement.getBoolElement(
instrument_dom,
"error_weighting",
default=ReductionOptions.error_weighting)
self.n_wedges = BaseScriptElement.getIntElement(
instrument_dom, "n_wedges", default=ReductionOptions.n_wedges)
self.wedge_angle = BaseScriptElement.getFloatElement(
instrument_dom,
"wedge_angle",
default=ReductionOptions.wedge_angle)
self.wedge_offset = BaseScriptElement.getFloatElement(
instrument_dom,
"wedge_offset",
default=ReductionOptions.wedge_offset)
self.normalization = BaseScriptElement.getIntElement(
instrument_dom,
"normalization",
default=ReductionOptions.normalization)
# Mask
element_list = dom.getElementsByTagName("Mask")
if len(element_list) > 0:
mask_dom = element_list[0]
self.top = BaseScriptElement.getIntElement(
mask_dom, "mask_top", default=ReductionOptions.top)
self.bottom = BaseScriptElement.getIntElement(
mask_dom, "mask_bottom", default=ReductionOptions.bottom)
self.right = BaseScriptElement.getIntElement(
mask_dom, "mask_right", default=ReductionOptions.right)
self.left = BaseScriptElement.getIntElement(
mask_dom, "mask_left", default=ReductionOptions.left)
self.masked_side = BaseScriptElement.getStringElement(
mask_dom, "mask_side", default=ReductionOptions.masked_side)
self.shapes = []
shapes_dom_list = mask_dom.getElementsByTagName("Shapes")
if len(shapes_dom_list) > 0:
shapes_dom = shapes_dom_list[0]
for item in shapes_dom.getElementsByTagName("rect"):
x_min = float(item.getAttribute("x_min"))
x_max = float(item.getAttribute("x_max"))
y_min = float(item.getAttribute("y_min"))
y_max = float(item.getAttribute("y_max"))
self.shapes.append(
ReductionOptions.RectangleMask(x_min, x_max, y_min,
y_max))
self.detector_ids = BaseScriptElement.getIntList(mask_dom,
"DetectorIDs",
default=[])
self.mask_file = BaseScriptElement.getStringElement(
mask_dom, "mask_file")
self.use_mask_file = BaseScriptElement.getBoolElement(
mask_dom,
"use_mask_file",
default=ReductionOptions.use_mask_file)
# Absolute scaling
element_list = dom.getElementsByTagName("AbsScale")
if len(element_list) > 0:
scale_dom = element_list[0]
self.manual_beam_diam = BaseScriptElement.getBoolElement(
scale_dom,
"manual_beam_diam",
default=ReductionOptions.manual_beam_diam)
self.scaling_factor = BaseScriptElement.getFloatElement(
scale_dom,
"scaling_factor",
default=ReductionOptions.scaling_factor)
self.calculate_scale = BaseScriptElement.getBoolElement(
scale_dom,
"calculate_scale",
default=ReductionOptions.calculate_scale)
self.scaling_direct_file = BaseScriptElement.getStringElement(
scale_dom, "scaling_direct_file")
self.scaling_att_trans = BaseScriptElement.getFloatElement(
scale_dom,
"scaling_att_trans",
default=ReductionOptions.scaling_att_trans)
self.scaling_beam_diam = BaseScriptElement.getFloatElement(
scale_dom,
"scaling_beam_diam",
default=ReductionOptions.scaling_beam_diam)
def from_xml_element(self, instrument_dom):
"""
Read in data from XML
@param xml_str: text to read the data from
"""
#Peak selection
self.DataPeakSelectionType = BaseScriptElement.getStringElement(
instrument_dom, "peak_selection_type")
#Peak from/to pixels
self.DataPeakPixels = [
BaseScriptElement.getIntElement(instrument_dom,
"from_peak_pixels"),
BaseScriptElement.getIntElement(instrument_dom, "to_peak_pixels")
]
#data metadata
_tthd_value = BaseScriptElement.getStringElement(
instrument_dom, "tthd_value")
if _tthd_value == '':
_tthd_value = 'N/A'
self.tthd_value = _tthd_value
_ths_value = BaseScriptElement.getStringElement(
instrument_dom, "ths_value")
if _ths_value == '':
_ths_value = 'N/A'
self.ths_value = _ths_value
#low resolution range
self.data_x_range_flag = BaseScriptElement.getBoolElement(
instrument_dom, "x_range_flag", default=DataSets.data_x_range_flag)
self.data_x_range = [
BaseScriptElement.getIntElement(instrument_dom, "x_min_pixel"),
BaseScriptElement.getIntElement(instrument_dom, "x_max_pixel")
]
self.norm_x_range_flag = BaseScriptElement.getBoolElement(
instrument_dom,
"norm_x_range_flag",
default=DataSets.norm_x_range_flag)
self.norm_x_range = [
BaseScriptElement.getIntElement(instrument_dom, "norm_x_min"),
BaseScriptElement.getIntElement(instrument_dom, "norm_x_max")
]
#discrete selection string
self.DataPeakDiscreteSelection = BaseScriptElement.getStringElement(
instrument_dom, "peak_discrete_selection")
#background flag
self.DataBackgroundFlag = BaseScriptElement.getBoolElement(
instrument_dom,
"background_flag",
default=DataSets.DataBackgroundFlag)
#background from/to pixels
self.DataBackgroundRoi = [
BaseScriptElement.getIntElement(instrument_dom, "back_roi1_from"),
BaseScriptElement.getIntElement(instrument_dom, "back_roi1_to"),
BaseScriptElement.getIntElement(instrument_dom, "back_roi2_from"),
BaseScriptElement.getIntElement(instrument_dom, "back_roi2_to")
]
#from TOF and to TOF
self.TofRangeFlag = BaseScriptElement.getBoolElement(
instrument_dom, "tof_range_flag", default=DataSets.TofRangeFlag)
self.DataTofRange = [
BaseScriptElement.getFloatElement(instrument_dom,
"from_tof_range"),
BaseScriptElement.getFloatElement(instrument_dom, "to_tof_range")
]
self.data_files = BaseScriptElement.getIntList(instrument_dom,
"data_sets")
#with or without norm
self.NormFlag = BaseScriptElement.getBoolElement(
instrument_dom, "norm_flag", default=DataSets.NormFlag)
#Peak from/to pixels
self.NormPeakPixels = [
BaseScriptElement.getIntElement(instrument_dom,
"norm_from_peak_pixels"),
BaseScriptElement.getIntElement(instrument_dom,
"norm_to_peak_pixels")
]
#background flag
self.NormBackgroundFlag = BaseScriptElement.getBoolElement(
instrument_dom,
"norm_background_flag",
default=DataSets.NormBackgroundFlag)
#background from/to pixels
self.NormBackgroundRoi = [
BaseScriptElement.getIntElement(instrument_dom,
"norm_from_back_pixels"),
BaseScriptElement.getIntElement(instrument_dom,
"norm_to_back_pixels")
]
self.norm_file = BaseScriptElement.getIntElement(
instrument_dom, "norm_dataset")
# Q cut
self.q_min = BaseScriptElement.getFloatElement(instrument_dom,
"q_min",
default=DataSets.q_min)
self.q_step = BaseScriptElement.getFloatElement(
instrument_dom, "q_step", default=DataSets.q_step)
self.auto_q_binning = BaseScriptElement.getBoolElement(
instrument_dom, "auto_q_binning", default=False)
# overlap_lowest_error
self.overlap_lowest_error = BaseScriptElement.getBoolElement(
instrument_dom, "overlap_lowest_error", default=True)
self.overlap_mean_value = BaseScriptElement.getBoolElement(
instrument_dom, "overlap_mean_value", default=False)
# Angle offset
self.angle_offset = BaseScriptElement.getFloatElement(
instrument_dom, "angle_offset", default=DataSets.angle_offset)
self.angle_offset_error = BaseScriptElement.getFloatElement(
instrument_dom,
"angle_offset_error",
default=DataSets.angle_offset_error)
#scaling factor file and options
self.scaling_factor_file = BaseScriptElement.getStringElement(
instrument_dom, "scaling_factor_file")
self.slits_width_flag = BaseScriptElement.getBoolElement(
instrument_dom, "slits_width_flag")
self.scaling_factor_file_flag = BaseScriptElement.getBoolElement(
instrument_dom, "scaling_factor_flag")
# geometry correction switch
self.geometry_correction_switch = BaseScriptElement.getBoolElement(
instrument_dom, "geometry_correction_switch")
#incident medium selected
if BaseScriptElement.getStringList(instrument_dom,
"incident_medium_list") != []:
self.incident_medium_list = BaseScriptElement.getStringList(
instrument_dom, "incident_medium_list")
self.incident_medium_index_selected = BaseScriptElement.getIntElement(
instrument_dom, "incident_medium_index_selected")
else:
self.incident_medium_list = ['H2O']
self.incident_medium_index_selected = 0
#fourth column (precision)
self.fourth_column_flag = BaseScriptElement.getBoolElement(
instrument_dom, "fourth_column_flag")
self.fourth_column_dq0 = BaseScriptElement.getFloatElement(
instrument_dom, "fourth_column_dq0")
self.fourth_column_dq_over_q = BaseScriptElement.getFloatElement(
instrument_dom, "fourth_column_dq_over_q")
# Primary fraction
self.clocking_from = BaseScriptElement.getIntElement(instrument_dom,
"clocking_from",
default=None)
self.clocking_to = BaseScriptElement.getIntElement(instrument_dom,
"clocking_to",
default=None)
def from_xml(self, xml_str):
"""
Read in data from XML
@param xml_str: text to read the data from
"""
self.reset()
dom = xml.dom.minidom.parseString(xml_str)
instrument_dom = dom.getElementsByTagName("Instrument")[0]
self.nx_pixels = BaseScriptElement.getIntElement(instrument_dom, "nx_pixels",
default=ReductionOptions.nx_pixels)
self.ny_pixels = BaseScriptElement.getIntElement(instrument_dom, "ny_pixels",
default=ReductionOptions.ny_pixels)
self.instrument_name = BaseScriptElement.getStringElement(
instrument_dom, "name")
self.pixel_size = BaseScriptElement.getFloatElement(instrument_dom, "pixel_size",
default=ReductionOptions.pixel_size)
self.sample_detector_distance = BaseScriptElement.getFloatElement(instrument_dom, "sample_det_dist",
default=ReductionOptions.sample_detector_distance)
self.detector_offset = BaseScriptElement.getFloatElement(instrument_dom, "detector_offset",
default=ReductionOptions.detector_offset)
self.wavelength = BaseScriptElement.getFloatElement(instrument_dom, "wavelength",
default=ReductionOptions.wavelength)
self.wavelength_spread = BaseScriptElement.getFloatElement(instrument_dom, "wavelength_spread",
default=ReductionOptions.wavelength_spread)
self.solid_angle_corr = BaseScriptElement.getBoolElement(instrument_dom, "solid_angle_corr",
default=ReductionOptions.solid_angle_corr)
# Output directory
self.use_data_directory = BaseScriptElement.getBoolElement(instrument_dom, "UseDataDirectory",
default=ReductionOptions.use_data_directory)
self.output_directory = BaseScriptElement.getStringElement(instrument_dom, "OutputDirectory",
default=ReductionOptions.output_directory)
# Dark current
self.dark_current_corr = BaseScriptElement.getBoolElement(instrument_dom, "dark_current_corr",
default=ReductionOptions.dark_current_corr)
self.dark_current_data = BaseScriptElement.getStringElement(
instrument_dom, "dark_current_data")
self.n_q_bins = BaseScriptElement.getIntElement(instrument_dom, "n_q_bins",
default=ReductionOptions.n_q_bins)
self.n_sub_pix = BaseScriptElement.getIntElement(instrument_dom, "n_sub_pix",
default=ReductionOptions.n_sub_pix)
self.log_binning = BaseScriptElement.getBoolElement(instrument_dom, "log_binning",
default=ReductionOptions.log_binning)
self.align_log_with_decades = BaseScriptElement.getBoolElement(instrument_dom, "align_log_with_decades",
default=ReductionOptions.align_log_with_decades)
self.error_weighting = BaseScriptElement.getBoolElement(instrument_dom, "error_weighting",
default=ReductionOptions.error_weighting)
self.n_wedges = BaseScriptElement.getIntElement(instrument_dom, "n_wedges",
default=ReductionOptions.n_wedges)
self.wedge_angle = BaseScriptElement.getFloatElement(instrument_dom, "wedge_angle",
default=ReductionOptions.wedge_angle)
self.wedge_offset = BaseScriptElement.getFloatElement(instrument_dom, "wedge_offset",
default=ReductionOptions.wedge_offset)
self.normalization = BaseScriptElement.getIntElement(instrument_dom, "normalization",
default=ReductionOptions.normalization)
# Mask
element_list = dom.getElementsByTagName("Mask")
if len(element_list) > 0:
mask_dom = element_list[0]
self.top = BaseScriptElement.getIntElement(
mask_dom, "mask_top", default=ReductionOptions.top)
self.bottom = BaseScriptElement.getIntElement(
mask_dom, "mask_bottom", default=ReductionOptions.bottom)
self.right = BaseScriptElement.getIntElement(
mask_dom, "mask_right", default=ReductionOptions.right)
self.left = BaseScriptElement.getIntElement(
mask_dom, "mask_left", default=ReductionOptions.left)
self.masked_side = BaseScriptElement.getStringElement(
mask_dom, "mask_side", default=ReductionOptions.masked_side)
self.shapes = []
shapes_dom_list = mask_dom.getElementsByTagName("Shapes")
if len(shapes_dom_list) > 0:
shapes_dom = shapes_dom_list[0]
for item in shapes_dom.getElementsByTagName("rect"):
x_min = float(item.getAttribute("x_min"))
x_max = float(item.getAttribute("x_max"))
y_min = float(item.getAttribute("y_min"))
y_max = float(item.getAttribute("y_max"))
self.shapes.append(ReductionOptions.RectangleMask(
x_min, x_max, y_min, y_max))
self.detector_ids = BaseScriptElement.getIntList(
mask_dom, "DetectorIDs", default=[])
self.mask_file = BaseScriptElement.getStringElement(
mask_dom, "mask_file")
self.use_mask_file = BaseScriptElement.getBoolElement(mask_dom, "use_mask_file",
default=ReductionOptions.use_mask_file)
# Absolute scaling
element_list = dom.getElementsByTagName("AbsScale")
if len(element_list) > 0:
scale_dom = element_list[0]
self.manual_beam_diam = BaseScriptElement.getBoolElement(scale_dom, "manual_beam_diam",
default=ReductionOptions.manual_beam_diam)
self.scaling_factor = BaseScriptElement.getFloatElement(scale_dom, "scaling_factor",
default=ReductionOptions.scaling_factor)
self.calculate_scale = BaseScriptElement.getBoolElement(scale_dom, "calculate_scale",
default=ReductionOptions.calculate_scale)
self.scaling_direct_file = BaseScriptElement.getStringElement(
scale_dom, "scaling_direct_file")
self.scaling_att_trans = BaseScriptElement.getFloatElement(scale_dom, "scaling_att_trans",
default=ReductionOptions.scaling_att_trans)
self.scaling_beam_diam = BaseScriptElement.getFloatElement(scale_dom, "scaling_beam_diam",
default=ReductionOptions.scaling_beam_diam)
def from_xml(self, xml_str):
"""
Read in data from XML
@param xml_str: text to read the data from
"""
self.reset()
dom = xml.dom.minidom.parseString(xml_str)
# Get Mantid version
mtd_version = BaseScriptElement.getMantidBuildVersion(dom)
instrument_dom = dom.getElementsByTagName("Instrument")[0]
self.nx_pixels = BaseScriptElement.getIntElement(instrument_dom, "nx_pixels",
default=ReductionOptions.nx_pixels)
self.ny_pixels = BaseScriptElement.getIntElement(instrument_dom, "ny_pixels",
default=ReductionOptions.ny_pixels)
self.instrument_name = BaseScriptElement.getStringElement(instrument_dom, "name")
self.pixel_size = BaseScriptElement.getFloatElement(instrument_dom, "pixel_size",
default=ReductionOptions.pixel_size)
self.sample_detector_distance = BaseScriptElement.getFloatElement(instrument_dom, "sample_det_dist",
default=ReductionOptions.sample_detector_distance)
self.detector_offset = BaseScriptElement.getFloatElement(instrument_dom, "detector_offset",
default=ReductionOptions.detector_offset)
self.wavelength = BaseScriptElement.getFloatElement(instrument_dom, "wavelength",
default=ReductionOptions.wavelength)
self.wavelength_spread = BaseScriptElement.getFloatElement(instrument_dom, "wavelength_spread",
default=ReductionOptions.wavelength_spread)
self.solid_angle_corr = BaseScriptElement.getBoolElement(instrument_dom, "solid_angle_corr",
default = ReductionOptions.solid_angle_corr)
# Output directory
self.use_data_directory = BaseScriptElement.getBoolElement(instrument_dom, "UseDataDirectory",
default = ReductionOptions.use_data_directory)
self.output_directory = BaseScriptElement.getStringElement(instrument_dom, "OutputDirectory",
default = ReductionOptions.output_directory)
# Dark current - take care of backward compatibility
if mtd_version!=0 and mtd_version<BaseScriptElement.UPDATE_1_CHANGESET_CUTOFF:
bck_entries = dom.getElementsByTagName("Background")
if len(bck_entries)>0:
self.dark_current_corr = BaseScriptElement.getBoolElement(bck_entries[0], "dark_current_corr",
default = ReductionOptions.dark_current_corr)
self.dark_current_data = BaseScriptElement.getStringElement(bck_entries[0], "dark_current_file")
else:
self.dark_current_corr = BaseScriptElement.getBoolElement(instrument_dom, "dark_current_corr",
default = ReductionOptions.dark_current_corr)
self.dark_current_data = BaseScriptElement.getStringElement(instrument_dom, "dark_current_data")
self.n_q_bins = BaseScriptElement.getIntElement(instrument_dom, "n_q_bins",
default=ReductionOptions.n_q_bins)
self.n_sub_pix = BaseScriptElement.getIntElement(instrument_dom, "n_sub_pix",
default=ReductionOptions.n_sub_pix)
self.log_binning = BaseScriptElement.getBoolElement(instrument_dom, "log_binning",
default = ReductionOptions.log_binning)
self.normalization = BaseScriptElement.getIntElement(instrument_dom, "normalization",
default=ReductionOptions.normalization)
# Mask - take care of backward compatibility
if mtd_version!=0 and mtd_version<BaseScriptElement.UPDATE_1_CHANGESET_CUTOFF:
self.top = BaseScriptElement.getIntElement(instrument_dom, "mask_top", default=ReductionOptions.top)
self.bottom = BaseScriptElement.getIntElement(instrument_dom, "mask_bottom", default=ReductionOptions.bottom)
self.right = BaseScriptElement.getIntElement(instrument_dom, "mask_right", default=ReductionOptions.right)
self.left = BaseScriptElement.getIntElement(instrument_dom, "mask_left", default=ReductionOptions.left)
else:
element_list = dom.getElementsByTagName("Mask")
if len(element_list)>0:
mask_dom = element_list[0]
self.top = BaseScriptElement.getIntElement(mask_dom, "mask_top", default=ReductionOptions.top)
self.bottom = BaseScriptElement.getIntElement(mask_dom, "mask_bottom", default=ReductionOptions.bottom)
self.right = BaseScriptElement.getIntElement(mask_dom, "mask_right", default=ReductionOptions.right)
self.left = BaseScriptElement.getIntElement(mask_dom, "mask_left", default=ReductionOptions.left)
self.shapes = []
shapes_dom_list = mask_dom.getElementsByTagName("Shapes")
if len(shapes_dom_list)>0:
shapes_dom = shapes_dom_list[0]
for item in shapes_dom.getElementsByTagName("rect"):
x_min = float(item.getAttribute("x_min"))
x_max = float(item.getAttribute("x_max"))
y_min = float(item.getAttribute("y_min"))
y_max = float(item.getAttribute("y_max"))
self.shapes.append(ReductionOptions.RectangleMask(x_min, x_max, y_min, y_max))
self.detector_ids = BaseScriptElement.getIntList(mask_dom, "DetectorIDs", default=[])
self.mask_file = BaseScriptElement.getStringElement(mask_dom, "mask_file")
self.use_mask_file = BaseScriptElement.getBoolElement(mask_dom, "use_mask_file",
default = ReductionOptions.use_mask_file)
# Absolute scaling
element_list = dom.getElementsByTagName("AbsScale")
if len(element_list)>0:
scale_dom = element_list[0]
self.manual_beam_diam = BaseScriptElement.getBoolElement(scale_dom, "manual_beam_diam",
default = ReductionOptions.manual_beam_diam)
self.scaling_factor = BaseScriptElement.getFloatElement(scale_dom, "scaling_factor",
default=ReductionOptions.scaling_factor)
self.calculate_scale = BaseScriptElement.getBoolElement(scale_dom, "calculate_scale",
default = ReductionOptions.calculate_scale)
self.scaling_direct_file = BaseScriptElement.getStringElement(scale_dom, "scaling_direct_file")
self.scaling_att_trans = BaseScriptElement.getFloatElement(scale_dom, "scaling_att_trans",
default=ReductionOptions.scaling_att_trans)
self.scaling_beam_diam = BaseScriptElement.getFloatElement(scale_dom, "scaling_beam_diam",
default=ReductionOptions.scaling_beam_diam)
