from pylab import *
from sctrace.rawtrace import Record
def display_record(t, trace):
plot(t, trace)
xlabel('time (ms)')
ylabel('Current (pA)')
title('Cluster example')
grid(True)
show()
if __name__ == "__main__":
filename="./sctrace/samples/cluster.abf"
record = Record(filename, filter_f = 3000)
end = len(record.trace) * record.dt
t = arange(0.0, end, record.dt)
print ('trace: ', record.trace)
print ('time: ', t)
display_record(t, record.trace)
new_segement = record.slice(0.1, 1.15, dtype = 'time')
new_cluster = new_segement.find_cluster()
popen = new_cluster.Popen()
print(new_cluster)
print(popen)
print(new_cluster.open_level)
#plot(new_cluster.display_trace())
from sctrace.rawtrace import Record
def display_record(t, trace):
plot(t, trace)
xlabel('time (ms)')
ylabel('Current (pA)')
title('Cluster example')
grid(True)
show()
if __name__ == "__main__":
filename = "./sctrace/samples/cluster.abf"
record = Record(filename, filter_f=3000)
end = len(record.trace) * record.dt
t = arange(0.0, end, record.dt)
print('trace: ', record.trace)
print('time: ', t)
display_record(t, record.trace)
new_segement = record.slice(0.1, 1.15, dtype='time')
new_cluster = new_segement.find_cluster()
popen = new_cluster.Popen()
print(new_cluster)
print(popen)
print(new_cluster.open_level)
#plot(new_cluster.display_trace())
def setUp(self):
self.filename = "./samples/cluster.abf"
self.record = Record(self.filename)
