def test_split_samples(testdir, mock_testclass):
samples = Path(__file__).parent.joinpath('samples.txt')
s.split_sample = MagicMock()
s.split_samples(samples)
s.split_sample.assert_any_call('POLR2A', 10, 100, 500)
s.split_sample.assert_any_call('ASDURF', 10, 100, 500)
s.split_sample.assert_any_call('POLR1C', 10, 100, 500)
def test_split_samples_second_parameters(testdir, mock_testclass):
samples = Path(__file__).parent.joinpath('samples.txt')
s.split_sample = MagicMock()
binlength = 20
binminlength = 200
binmaxlength = 400
s.split_samples(samples, 1, binlength, binminlength, binmaxlength)
s.split_sample.assert_called_once_with('ASDURF', binlength, binminlength,
binmaxlength)
def test_split_samples_parameters(testdir, mock_testclass):
samples = Path(__file__).parent.joinpath('samples.txt')
s.split_sample = MagicMock()
binlength = 20
binminlength = 200
binmaxlength = 400
s.split_samples(samples,
binlength=binlength,
binminlength=binminlength,
binmaxlength=binmaxlength)
s.split_sample.assert_any_call('POLR2A', binlength, binminlength,
binmaxlength)
s.split_sample.assert_any_call('ASDURF', binlength, binminlength,
binmaxlength)
s.split_sample.assert_any_call('POLR1C', binlength, binminlength,
binmaxlength)
def test_split_samples_second(testdir, mock_testclass):
samples = Path(__file__).parent.joinpath('samples.txt')
s.split_sample = MagicMock()
s.split_samples(samples, 1)
s.split_sample.assert_called_once_with('ASDURF', 10, 100, 500)