def test_parse_heatmap_values(testdir, mock_testclass):
sample_splits = ['POLR2A-100-110', 'POLR2A-120-130']
output_folder = str(testdir)
copyfile(
Path(__file__).parent.joinpath('ind_data_POLR2A-100-110.txt'),
'ind_data_POLR2A-100-110.txt')
copyfile(
Path(__file__).parent.joinpath('ind_data_POLR2A-120-130.txt'),
'ind_data_POLR2A-120-130.txt')
heatmap = v.parse_heatmap_values(sample_splits, output_folder)
for split in sample_splits:
assert split in heatmap
assert 'YCR088W' in heatmap['POLR2A-100-110']
assert heatmap['POLR2A-100-110']['YCR088W'] == '1.2'
assert 'YMR282C' in heatmap['POLR2A-100-110']
assert heatmap['POLR2A-100-110']['YMR282C'] == '2.408'
assert 'YOR374W' in heatmap['POLR2A-100-110']
assert heatmap['POLR2A-100-110']['YOR374W'] == '0.34'
assert 'YPR185W' in heatmap['POLR2A-100-110']
assert heatmap['POLR2A-100-110']['YPR185W'] == '0.978'
assert 'YPL259C' in heatmap['POLR2A-100-110']
assert heatmap['POLR2A-100-110']['YPL259C'] == '1.5883'
assert 'YER107C' in heatmap['POLR2A-120-130']
assert heatmap['POLR2A-120-130']['YER107C'] == '1.32'
assert 'YEL056W' in heatmap['POLR2A-120-130']
assert heatmap['POLR2A-120-130']['YEL056W'] == '1.9516'
assert 'YNL037C' in heatmap['POLR2A-120-130']
assert heatmap['POLR2A-120-130']['YNL037C'] == '0'
assert 'YDR017C' in heatmap['POLR2A-120-130']
assert heatmap['POLR2A-120-130']['YDR017C'] == '0.832'
assert 'YKL186C' in heatmap['POLR2A-120-130']
assert heatmap['POLR2A-120-130']['YKL186C'] == '0.224'
def test_parse_heatmap_values_noheatmapfiles(testdir, mock_testclass):
sample_splits = ['POLR2A-100-110', 'POLR2A-120-130']
output_folder = str(os.curdir)
with pytest.raises(AssertionError):
v.parse_heatmap_values(sample_splits, output_folder)