def setUp(self):
self.sf = serverfiles.ServerFiles(server="http://localhost:12345/")
t = time.time()
while time.time(
) - t < 1.: #wait for at most 1 second for server process to come online
try:
self.sf.info("domain1", "withinfo")
break
except:
pass
self.path = tempfile.mkdtemp()
self.lf = serverfiles.LocalFiles(path=self.path, serverfiles=self.sf)
def scan_url(topdir: str, include_patterns: Tuple[str] = ("*",),
exclude_patterns: Tuple[str] = (".*",)) -> List[str]:
try:
files = serverfiles.ServerFiles(topdir).listfiles()
except ConnectionError:
return []
include_patterns = include_patterns or ("*",)
paths = []
for filename in files:
path = topdir + "/".join(filename)
if matches_any(path, include_patterns) and \
not matches_any(path, exclude_patterns):
paths.append(path)
return paths
def __init__(self):
self.local_data = os.path.join(data_dir(versioned=False), 'sentiment/')
self.serverfiles = serverfiles.ServerFiles(self.server_url)
self.localfiles = serverfiles.LocalFiles(self.local_data,
serverfiles=self.serverfiles)
self._supported_languages = []
def __init__(self):
self.local_data = os.path.join(data_dir(versioned=False), 'udpipe/')
self.serverfiles = serverfiles.ServerFiles(self.server_url)
self.localfiles = serverfiles.LocalFiles(self.local_data,
serverfiles=self.serverfiles)
import os
import serverfiles
from Orange.misc.environ import data_dir
import orangecontrib.infrared # loads file readers
server = serverfiles.ServerFiles("http://193.2.72.57/infrared-data/")
localfiles = serverfiles.LocalFiles(
os.path.join(data_dir(), "orange-infrared"), serverfiles=server)
def spectra20nea():
return localfiles.localpath_download("spectra20.nea")
def dust():
localfiles.localpath_download("20160831_06_Paris_25x_highmag.dat")
return localfiles.localpath_download("20160831_06_Paris_25x_highmag.hdr")
if __name__ == '__main__':
def start_server():
class Handler(SimpleHTTPRequestHandler):
def __init__(self, *args, **kwargs):
super().__init__(*args, directory='serverfiles/', **kwargs)
httpd = HTTPServer(('localhost', 8000), Handler)
httpd.serve_forever()
p = Process(target=start_server)
p.start()
prepare_gene_serverfiles()
prepare_marker_genes_serverfiles()
prepare_homologene_serverfiles()
prepare_dictybase_serverfiles()
prepare_go_serverfiles()
prepare_gene_sets_serverfiles()
prepare_taxonomy_serverfiles()
info = list(
serverfiles.ServerFiles(
server='http://localhost:8000/').allinfo().items())
with open('serverfiles/__INFO__', 'wt') as f:
json.dump(info, f)
shutil.make_archive('serverfiles_dump', 'gztar', root_dir='serverfiles/')
p.terminate()