def test_06_duplicates(self):
# first make ourselves a job to work on
job = SpreadsheetJob()
job.save()
# now make a bunch of records, some unique and some duplicate
# unique pmcid
r = Record()
r.upload_id = job.id
r.pmcid = "PMCunique"
r.save()
# duplicate pmcid
r = Record()
r.upload_id = job.id
r.pmcid = "PMCdupe"
r.save()
r = Record()
r.upload_id = job.id
r.pmcid = "PMCdupe"
r.save()
# unique pmid
r = Record()
r.upload_id = job.id
r.pmid = "unique"
r.save()
# duplicate pmid
r = Record()
r.upload_id = job.id
r.pmid = "dupe"
r.save()
r = Record()
r.upload_id = job.id
r.pmid = "dupe"
r.save()
# unique doi
r = Record()
r.upload_id = job.id
r.doi = "10.unique"
r.save()
# duplicate pmcid
r = Record()
r.upload_id = job.id
r.doi = "10.dupe"
r.save()
r = Record()
r.upload_id = job.id
r.doi = "10.dupe"
r.save()
# one that is a duplicate of everything
r = Record()
r.upload_id = job.id
r.pmcid = "PMCdupe"
r.pmid = "dupe"
r.doi = "10.dupe"
r.save()
# one that is confused about its duplication
r = Record()
r.upload_id = job.id
r.pmcid = "PMCdupe"
r.pmid = "dupe"
r.doi = "10.notdupe"
r.save()
time.sleep(2)
dupes = job.list_duplicate_identifiers()
# check the structure of the response
assert "pmcid" in dupes
assert "pmid" in dupes
assert "doi" in dupes
# check the contentes
assert len(dupes["pmcid"]) == 1
assert "PMCdupe" in dupes["pmcid"]
assert len(dupes["pmid"]) == 1
assert "dupe" in dupes["pmid"]
assert len(dupes["doi"]) == 1
assert "10.dupe" in dupes["doi"]
def test_06_duplicates(self):
# first make ourselves a job to work on
job = SpreadsheetJob()
job.save()
# now make a bunch of records, some unique and some duplicate
# unique pmcid
r = Record()
r.upload_id = job.id
r.pmcid = "PMCunique"
r.save()
# duplicate pmcid
r = Record()
r.upload_id = job.id
r.pmcid = "PMCdupe"
r.save()
r = Record()
r.upload_id = job.id
r.pmcid = "PMCdupe"
r.save()
# unique pmid
r = Record()
r.upload_id = job.id
r.pmid = "unique"
r.save()
# duplicate pmid
r = Record()
r.upload_id = job.id
r.pmid = "dupe"
r.save()
r = Record()
r.upload_id = job.id
r.pmid = "dupe"
r.save()
# unique doi
r = Record()
r.upload_id = job.id
r.doi = "10.unique"
r.save()
# duplicate pmcid
r = Record()
r.upload_id = job.id
r.doi = "10.dupe"
r.save()
r = Record()
r.upload_id = job.id
r.doi = "10.dupe"
r.save()
# one that is a duplicate of everything
r = Record()
r.upload_id = job.id
r.pmcid = "PMCdupe"
r.pmid = "dupe"
r.doi = "10.dupe"
r.save()
# one that is confused about its duplication
r = Record()
r.upload_id = job.id
r.pmcid = "PMCdupe"
r.pmid = "dupe"
r.doi = "10.notdupe"
r.save()
time.sleep(2)
dupes = job.list_duplicate_identifiers()
# check the structure of the response
assert "pmcid" in dupes
assert "pmid" in dupes
assert "doi" in dupes
# check the contentes
assert len(dupes["pmcid"]) == 1
assert "PMCdupe" in dupes["pmcid"]
assert len(dupes["pmid"]) == 1
assert "dupe" in dupes["pmid"]
assert len(dupes["doi"]) == 1
assert "10.dupe" in dupes["doi"]