def testMemoAlign4(self):
self.assertEqual(hw.memoAlignScore('CIEAFGTSKQKRALNSRRMNAVGNDIVSTAVTKAAADVIDAKGVTALIQDVAQD', 'RDLPIWTSVDWKSLPATEIFNKAFSQGSDEAMYDYMAVYKKSCPQTRR',-9,hw.blosum62,{}), -48)
def testMemoAlign2(self):
self.assertEqual(hw.memoAlignScore('','FGTSK',-9,hw.blosum62,{}), -45)
def testMemoAlign3(self):
self.assertEqual(hw.memoAlignScore('IVEKGYY','AVEYY',-9,hw.blosum62,{}), 4)
def testMemoAlign1(self):
self.assertEqual(hw.memoAlignScore('','',-9,hw.blosum62,{}), 0)
def testMemoAlign4(self):
self.assertEqual(
hw.memoAlignScore(
'CIEAFGTSKQKRALNSRRMNAVGNDIVSTAVTKAAADVIDAKGVTALIQDVAQD',
'RDLPIWTSVDWKSLPATEIFNKAFSQGSDEAMYDYMAVYKKSCPQTRR', -9,
hw.blosum62, {}), -48)
def testMemoAlign3(self):
self.assertEqual(
hw.memoAlignScore('IVEKGYY', 'AVEYY', -9, hw.blosum62, {}), 4)
def testMemoAlign2(self):
self.assertEqual(hw.memoAlignScore('', 'FGTSK', -9, hw.blosum62, {}),
-45)
def testMemoAlign1(self):
self.assertEqual(hw.memoAlignScore('', '', -9, hw.blosum62, {}), 0)