def test_legal(self):
with h5py.File(data_utils.std_beps_path, mode='r') as h5_f:
h5_main = h5_f['/Raw_Measurement/source_main']
expected_groups = [
h5_f['/Raw_Measurement/source_main-Fitter_000'],
h5_f['/Raw_Measurement/source_main-Fitter_001']
]
ret_val = prov_utils.find_results_groups(h5_main, 'Fitter')
self.assertEqual(set(ret_val), set(expected_groups))
def test_results_in_diff_file_invalid_type(self):
file_path = 'test.h5'
data_utils.delete_existing_file(file_path)
with h5py.File(file_path, mode='w') as h5_f:
h5_main = h5_f.create_dataset('Main', data=[1, 2, 3])
with self.assertRaises(TypeError):
_ = prov_utils.find_results_groups(h5_main,
'Tool',
h5_parent_group=h5_main)
os.remove(file_path)
def test_results_in_diff_file(self):
file_path = 'test.h5'
data_utils.delete_existing_file(file_path)
new_path = 'new.h5'
data_utils.delete_existing_file(new_path)
with h5py.File(file_path, mode='w') as h5_f:
h5_main = h5_f.create_dataset('Main', data=[1, 2, 3])
with h5py.File(new_path, mode='w') as h5_f_2:
grp_1 = h5_f_2.create_group('Main-Tool_000')
grp_2 = h5_f_2.create_group('Main-Tool_001')
grps = prov_utils.find_results_groups(h5_main,
'Tool',
h5_parent_group=h5_f_2)
self.assertEqual(set([grp_1, grp_2]), set(grps))
os.remove(file_path)
os.remove(new_path)
def test_no_such_tool(self):
with h5py.File(data_utils.std_beps_path, mode='r') as h5_f:
h5_main = h5_f['/Raw_Measurement/source_main']
ret_val = prov_utils.find_results_groups(h5_main, 'Blah')
self.assertEqual(len(ret_val), 0)
def test_not_string(self):
with h5py.File(data_utils.std_beps_path, mode='r') as h5_f:
h5_main = h5_f['/Raw_Measurement/source_main']
with self.assertRaises(TypeError):
_ = prov_utils.find_results_groups(h5_main, np.arange(5))
def test_no_dset(self):
with h5py.File(data_utils.std_beps_path, mode='r') as h5_f:
with self.assertRaises(TypeError):
_ = prov_utils.find_results_groups(h5_f, 'Fitter')