def fetch_training_examples(): """ """ from signal_labels import fetch_signal_seq_examples as fetch_seq from data_quality_check import split_train_test_examples fetch_seq.get_feature_seq( "H_sapiens/ensembl_release_79/STARgenome/hg19_chrOnly.fa", "../H_sapiens_stringtie_genes.gff") split_train_test_examples.split_data_random_non_overlap() split_train_test_examples.get_matching_neg_example( "tss_sig_pos_example_1.fa", "tss_sig_neg_example.fa", "tss_sig_neg_example_1.fa") split_train_test_examples.get_matching_neg_example( "tss_sig_pos_example_2.fa", "tss_sig_neg_example.fa", "tss_sig_neg_example_2.fa") split_train_test_examples.get_matching_neg_example( "tss_sig_pos_example_3.fa", "tss_sig_neg_example.fa", "tss_sig_neg_example_3.fa")
def fetch_training_examples(): """ """ from signal_labels import fetch_signal_seq_examples as fetch_seq from data_quality_check import split_train_test_examples fetch_seq.get_feature_seq( "H_sapiens/ensembl_release_79/STARgenome/hg19_chrOnly.fa", "../H_sapiens_stringtie_genes.gff" ) split_train_test_examples.split_data_random_non_overlap() split_train_test_examples.get_matching_neg_example( "tss_sig_pos_example_1.fa", "tss_sig_neg_example.fa", "tss_sig_neg_example_1.fa" ) split_train_test_examples.get_matching_neg_example( "tss_sig_pos_example_2.fa", "tss_sig_neg_example.fa", "tss_sig_neg_example_2.fa" ) split_train_test_examples.get_matching_neg_example( "tss_sig_pos_example_3.fa", "tss_sig_neg_example.fa", "tss_sig_neg_example_3.fa" )
from signal_labels import fetch_signal_seq_examples as fetch_seq from data_quality_check import split_train_test_examples fetch_seq.get_feature_seq("H_sapiens/ensembl_release_79/STARgenome/hg19_chrOnly.fa", "../H_sapiens_stringtie_genes.gff") split_train_test_examples.split_data_random_non_overlap() split_train_test_examples.get_matching_neg_example("tss_sig_pos_example_1.fa", "tss_sig_neg_example.fa", "tss_sig_neg_example_1.fa") split_train_test_examples.get_matching_neg_example("tss_sig_pos_example_2.fa", "tss_sig_neg_example.fa", "tss_sig_neg_example_2.fa") split_train_test_examples.get_matching_neg_example("tss_sig_pos_example_3.fa", "tss_sig_neg_example.fa", "tss_sig_neg_example_3.fa")