示例#1
0
    def persist_changes(cls, obj, updated_by, update_comment=None, **kwargs):
        errors = dict()
        obj.updated_by = updated_by
        try:
            obj.full_clean()
        except ValidationError as e:
            errors.update(e.message_dict)
            return errors

        persisted = False
        try:
            source_version = SourceVersion.get_head_of(obj.parent)
            obj.save(**kwargs)

            prev_latest_version = MappingVersion.objects.get(
                versioned_object_id=obj.id, is_latest_version=True)
            prev_latest_version.is_latest_version = False
            prev_latest_version.save()

            new_latest_version = MappingVersion.for_mapping(obj)
            new_latest_version.previous_version = prev_latest_version
            new_latest_version.update_comment = update_comment
            new_latest_version.mnemonic = int(prev_latest_version.mnemonic) + 1
            new_latest_version.save()

            source_version.update_mapping_version(new_latest_version)

            persisted = True
        finally:
            if not persisted:
                errors['non_field_errors'] = ["Failed to persist mapping."]
        return errors
示例#2
0
    def persist_changes(cls, obj, updated_by, update_comment=None, **kwargs):
        errors = dict()
        obj.updated_by = updated_by
        try:
            obj.full_clean()
        except ValidationError as e:
            errors.update(e.message_dict)
            return errors

        persisted = False
        try:
            source_version = SourceVersion.get_head_of(obj.parent)
            obj.save(**kwargs)

            prev_latest_version = MappingVersion.objects.get(versioned_object_id=obj.id, is_latest_version=True)
            prev_latest_version.is_latest_version = False
            prev_latest_version.save()

            new_latest_version  = MappingVersion.for_mapping(obj)
            new_latest_version.previous_version = prev_latest_version
            new_latest_version.update_comment = update_comment
            new_latest_version.mnemonic = int(prev_latest_version.mnemonic) + 1
            new_latest_version.save()

            source_version.update_mapping_version(new_latest_version)

            persisted = True
        finally:
            if not persisted:
                errors['non_field_errors'] = ["Failed to persist mapping."]
        return errors
示例#3
0
文件: models.py 项目: wandesky/oclapi
    def persist_clone(cls, obj, user=None, **kwargs):
        errors = dict()
        if not user:
            errors[
                'version_created_by'] = 'Must specify which user is attempting to create a new concept version.'
            return errors
        obj.version_created_by = user.username
        previous_version = obj.previous_version
        previous_was_latest = previous_version.is_latest_version and obj.is_latest_version
        source_version = SourceVersion.get_head_of(obj.versioned_object.parent)
        persisted = False
        errored_action = 'saving new concept version'
        try:
            obj.clean()
            obj.save(**kwargs)
            obj.mnemonic = obj.id
            obj.save()

            errored_action = "updating 'is_latest_version' attribute on previous version"
            if previous_was_latest:
                previous_version.is_latest_version = False
                previous_version.save()

            errored_action = 'replacing previous version in latest version of source'
            source_version.update_concept_version(obj)

            # Mark versioned object as updated
            concept = obj.versioned_object
            concept.extras = obj.extras
            concept.names = obj.names
            concept.descriptions = obj.descriptions
            concept.concept_class = obj.concept_class
            concept.datatype = obj.datatype
            concept.save()

            persisted = True
        except ValidationError as err:
            errors.update(err.message_dict)
        finally:
            if not persisted:
                source_version.update_concept_version(obj.previous_version)
                if previous_was_latest:
                    previous_version.is_latest_version = True
                    previous_version.save()
                if obj.id:
                    obj.delete()
                errors['non_field_errors'] = [
                    'An error occurred while %s.' % errored_action
                ]
        return errors
示例#4
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    def __init__(self, source, concepts_file, user, output_stream, error_stream, save_validation_errors=True, validation_logger=None):
        """ Initialize mapping importer """
        self.source = source
        self.concepts_file = concepts_file
        self.stdout = output_stream
        self.stderr = error_stream
        self.user = user
        # Retrieve latest source version and, if specified, create a new one
        self.source_version = SourceVersion.get_head_of(self.source)
        self.validation_logger = validation_logger
        self.save_validation_errors = save_validation_errors

        if self.save_validation_errors and self.validation_logger is None:
            self.validation_logger = ValidationLogger()
示例#5
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文件: tests.py 项目: uonafya/oclapi
    def test_get_head_of_when_head_does_not_exist(self):
        source = Source(name='source2',
                        mnemonic='source2',
                        full_name='Source Two',
                        source_type='Dictionary',
                        public_access=ACCESS_TYPE_EDIT,
                        default_locale='en',
                        supported_locales=['en'],
                        website='www.source2.com',
                        description='This is not the first test source')

        kwargs = {'parent_resource': self.profile}
        Source.persist_new(source, self.user, **kwargs)
        source.get_version_model().objects.get(
            mnemonic='HEAD', versioned_object_id=source.id).delete()
        self.assertIsNone(SourceVersion.get_head_of(source))
示例#6
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    def persist_clone(cls, obj, user=None, **kwargs):
        errors = dict()
        if not user:
            errors['version_created_by'] = 'Must specify which user is attempting to create a new concept version.'
            return errors
        obj.version_created_by = user.username
        previous_version = obj.previous_version
        previous_was_latest = previous_version.is_latest_version and obj.is_latest_version
        source_version = SourceVersion.get_head_of(obj.versioned_object.parent)
        persisted = False
        errored_action = 'saving new concept version'
        try:
            obj.clean()
            obj.save(**kwargs)
            obj.mnemonic = obj.id
            obj.save()

            errored_action = "updating 'is_latest_version' attribute on previous version"
            if previous_was_latest:
                previous_version.is_latest_version = False
                previous_version.save()

            errored_action = 'replacing previous version in latest version of source'
            source_version.update_concept_version(obj)

            # Mark versioned object as updated
            concept = obj.versioned_object
            concept.extras = obj.extras
            concept.names= obj.names
            concept.descriptions= obj.descriptions
            concept.concept_class=obj.concept_class
            concept.datatype=obj.datatype
            concept.save()

            persisted = True
        except ValidationError as err:
            errors.update(err.message_dict)
        finally:
            if not persisted:
                source_version.update_concept_version(obj.previous_version)
                if previous_was_latest:
                    previous_version.is_latest_version = True
                    previous_version.save()
                if obj.id:
                    obj.delete()
                errors['non_field_errors'] = ['An error occurred while %s.' % errored_action]
        return errors
示例#7
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    def test_get_head_of_when_head_does_not_exist(self):
        source = Source(name='source2',
            mnemonic='source2',
            full_name='Source Two',
            source_type='Dictionary',
            public_access=ACCESS_TYPE_EDIT,
            default_locale='en',
            supported_locales=['en'],
            website='www.source2.com',
            description='This is not the first test source'
        )

        kwargs = {
            'parent_resource': self.profile
        }
        Source.persist_new(source, self.user, **kwargs)
        source.get_version_model().objects.get(mnemonic='HEAD', versioned_object_id=source.id).delete()
        self.assertIsNone(SourceVersion.get_head_of(source))
示例#8
0
    def persist_clone(cls, obj, user=None, prev_latest_version=None, **kwargs):
        errors = dict()
        if not user:
            errors[
                'version_created_by'] = 'Must specify which user is attempting to create a new concept version.'
            return errors
        obj.version_created_by = user.username
        previous_version = obj.previous_version
        previous_was_latest = previous_version.is_latest_version and obj.is_latest_version
        source_version = SourceVersion.get_head_of(obj.versioned_object.parent)

        persisted = False
        errored_action = 'saving new mapping version'
        try:
            obj.save(**kwargs)
            obj.mnemonic = int(prev_latest_version.mnemonic) + 1
            obj.save()

            errored_action = "updating 'is_latest_version' attribute on previous version"
            if previous_was_latest:
                previous_version.is_latest_version = False
                previous_version.save()

            errored_action = 'replacing previous version in latest version of source'
            source_version.update_mapping_version(obj)

            # Mark versioned object as updated
            mapping = obj.versioned_object
            mapping.save()

            persisted = True
        finally:
            if not persisted:
                source_version.update_mapping_version(obj.previous_version)
                if previous_was_latest:
                    previous_version.is_latest_version = True
                    previous_version.save()
                if obj.id:
                    obj.delete()
                errors['non_field_errors'] = [
                    'An error occurred while %s.' % errored_action
                ]
        return errors
示例#9
0
    def __init__(self,
                 source,
                 concepts_file,
                 user,
                 output_stream,
                 error_stream,
                 save_validation_errors=True,
                 validation_logger=None):
        """ Initialize mapping importer """
        self.source = source
        self.concepts_file = concepts_file
        self.stdout = output_stream
        self.stderr = error_stream
        self.user = user
        # Retrieve latest source version and, if specified, create a new one
        self.source_version = SourceVersion.get_head_of(self.source)
        self.validation_logger = validation_logger
        self.save_validation_errors = save_validation_errors

        if self.save_validation_errors and self.validation_logger is None:
            self.validation_logger = ValidationLogger()
示例#10
0
    def persist_clone(cls, obj, user=None, prev_latest_version=None, **kwargs):
        errors = dict()
        if not user:
            errors['version_created_by'] = 'Must specify which user is attempting to create a new concept version.'
            return errors
        obj.version_created_by = user.username
        previous_version = obj.previous_version
        previous_was_latest = previous_version.is_latest_version and obj.is_latest_version
        source_version = SourceVersion.get_head_of(obj.versioned_object.parent)

        persisted = False
        errored_action = 'saving new mapping version'
        try:
            obj.save(**kwargs)
            obj.mnemonic = int(prev_latest_version.mnemonic) + 1
            obj.save()

            errored_action = "updating 'is_latest_version' attribute on previous version"
            if previous_was_latest:
                previous_version.is_latest_version = False
                previous_version.save()

            errored_action = 'replacing previous version in latest version of source'
            source_version.update_mapping_version(obj)

            # Mark versioned object as updated
            mapping = obj.versioned_object
            mapping.save()

            persisted = True
        finally:
            if not persisted:
                source_version.update_mapping_version(obj.previous_version)
                if previous_was_latest:
                    previous_version.is_latest_version = True
                    previous_version.save()
                if obj.id:
                    obj.delete()
                errors['non_field_errors'] = ['An error occurred while %s.' % errored_action]
        return errors
示例#11
0
 def test_get_head_of(self):
     self.assertEquals(SourceVersion.get_head_of(self.source), self.source.get_version_model().objects.get(mnemonic='HEAD', versioned_object_id=self.source.id))
示例#12
0
    def import_mappings(self, new_version=False, total=0, test_mode=False, deactivate_old_records=False, **kwargs):
        initial_signal_processor = haystack.signal_processor
        try:
            haystack.signal_processor.teardown()
            haystack.signal_processor = haystack.signals.BaseSignalProcessor
            import_start_time = datetime.now()
            logger.info('Started import at {}'.format(import_start_time.strftime("%Y-%m-%dT%H:%M:%S")))

            """ Main mapping importer loop """
            logger.info('Import mappings to source...')
            self.test_mode = test_mode

            # Retrieve latest source version and, if specified, create a new one
            self.source_version = SourceVersion.get_head_of(self.source)
            if new_version:
                try:
                    new_version = SourceVersion.for_base_object(
                        self.source, new_version, previous_version=self.source_version)
                    new_version.full_clean()
                    new_version.save()
                    new_version.seed_concepts()
                    new_version.seed_mappings()

                    self.source_version = new_version
                except Exception as exc:
                    raise CommandError('Failed to create new source version due to %s' % exc.args[0])

            # Load the JSON file line by line and import each line
            self.mapping_ids = set(self.source_version.get_mapping_ids())
            self.count = 0
            for line in self.mappings_file:

                # Load the next JSON line
                self.count += 1
                data = None
                try:
                    data = json.loads(line)
                except ValueError as exc:
                    str_log = 'Skipping invalid JSON line: %s. JSON: %s\n' % (exc.args[0], line)
                    self.stderr.write(str_log)
                    logger.warning(str_log)
                    self.count_action(ImportActionHelper.IMPORT_ACTION_SKIP)

                # Process the import for the current JSON line
                if data:
                    try:
                        update_action = self.handle_mapping(data)
                        self.count_action(update_action)
                    except IllegalInputException as exc:
                        str_log = '%s, failed to parse line %s. Skipping it...\n' % (exc.args[0], data)
                        self.stderr.write(str_log)
                        logger.warning(str_log)
                        self.count_action(ImportActionHelper.IMPORT_ACTION_SKIP)
                    except InvalidStateException as exc:
                        str_log = 'Source is in an invalid state!\n%s\n%s\n' % (exc.args[0], data)
                        self.stderr.write(str_log)
                        logger.warning(str_log)
                        self.count_action(ImportActionHelper.IMPORT_ACTION_SKIP)

                # Simple progress bars
                if (self.count % 10) == 0:
                    str_log = ImportActionHelper.get_progress_descriptor(
                        'mappings', self.count, total, self.action_count)
                    self.stdout.write(str_log, ending='\r')
                    self.stdout.flush()
                    if (self.count % 1000) == 0:
                        logger.info(str_log)

            # Done with the input file, so close it
            self.mappings_file.close()

            # Import complete - display final progress bar
            str_log = ImportActionHelper.get_progress_descriptor(
                'mappings', self.count, total, self.action_count)
            self.stdout.write(str_log, ending='\r')
            self.stdout.flush()
            logger.info(str_log)

            # Log remaining unhandled IDs
            str_log = 'Remaining %s unhandled mapping IDs\n' % len(self.mapping_ids)
            self.stdout.write(str_log)
            self.stdout.flush()
            logger.info(str_log)

            # Deactivate old records
            if deactivate_old_records:
                str_log = 'Deactivating old mappings...\n'
                self.stdout.write(str_log)
                logger.info(str_log)
                for mapping_id in self.mapping_ids:
                    try:
                        if self.remove_mapping(mapping_id):
                            self.count_action(ImportActionHelper.IMPORT_ACTION_DEACTIVATE)

                            # Log the mapping deactivation
                            str_log = 'Deactivated mapping: %s\n' % mapping_id
                            self.stdout.write(str_log)
                            logger.info(str_log)

                    except InvalidStateException as exc:
                        str_log = 'Failed to inactivate mapping on ID %s! %s\n' % (mapping_id, exc.args[0])
                        self.stderr.write(str_log)
                        logger.warning(str_log)
            else:
                str_log = 'Skipping deactivation loop...\n'
                self.stdout.write(str_log)
                logger.info(str_log)

            # Display final summary
            str_log = 'Finished importing mappings!\n'
            self.stdout.write(str_log)
            logger.info(str_log)
            str_log = ImportActionHelper.get_progress_descriptor(
                'mappings', self.count, total, self.action_count)
            self.stdout.write(str_log, ending='\r')
            logger.info(str_log)

            actions = self.action_count
            update_index_required = actions.get(ImportActionHelper.IMPORT_ACTION_ADD, 0) > 0
            update_index_required |= actions.get(ImportActionHelper.IMPORT_ACTION_UPDATE, 0) > 0

            if update_index_required:
                logger.info('Indexing objects updated since {}'.format(import_start_time.strftime("%Y-%m-%dT%H:%M:%S")))
                update_index.Command().handle(start_date=import_start_time.strftime("%Y-%m-%dT%H:%M:%S"), verbosity=2,
                                              workers=4, batchsize=100)
        finally:
            haystack.signal_processor = initial_signal_processor
            haystack.signal_processor.setup()
示例#13
0
 def test_get_head_of(self):
     self.assertEquals(SourceVersion.get_head_of(self.source), self.source.get_version_model().objects.get(mnemonic='HEAD', versioned_object_id=self.source.id))