class Ui_ModelFinder(object):
def setupUi(self, ModelFinder):
ModelFinder.setObjectName("ModelFinder")
ModelFinder.resize(835, 522)
self.verticalLayout = QtWidgets.QVBoxLayout(ModelFinder)
self.verticalLayout.setObjectName("verticalLayout")
self.gridLayout_4 = QtWidgets.QGridLayout()
self.gridLayout_4.setObjectName("gridLayout_4")
self.groupBox_4 = QtWidgets.QGroupBox(ModelFinder)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout.setObjectName("gridLayout")
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setObjectName("label_5")
self.gridLayout.addWidget(self.label_5, 0, 0, 1, 1)
self.lineEdit = InputQLineEdit(self.groupBox_4)
self.lineEdit.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit.setText("")
self.lineEdit.setReadOnly(True)
self.lineEdit.setObjectName("lineEdit")
self.gridLayout.addWidget(self.lineEdit, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.label_8 = QtWidgets.QLabel(self.groupBox_4)
self.label_8.setObjectName("label_8")
self.gridLayout.addWidget(self.label_8, 1, 0, 1, 1)
self.lineEdit_2 = InputQLineEdit(self.groupBox_4)
self.lineEdit_2.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit_2.setReadOnly(True)
self.lineEdit_2.setObjectName("lineEdit_2")
self.gridLayout.addWidget(self.lineEdit_2, 1, 1, 1, 1)
self.pushButton_4 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_4.sizePolicy().hasHeightForWidth())
self.pushButton_4.setSizePolicy(sizePolicy)
self.pushButton_4.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_4.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_4.setStyleSheet("")
self.pushButton_4.setText("")
self.pushButton_4.setObjectName("pushButton_4")
self.gridLayout.addWidget(self.pushButton_4, 1, 2, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_14 = QtWidgets.QLabel(self.groupBox_4)
self.label_14.setOpenExternalLinks(True)
self.label_14.setObjectName("label_14")
self.horizontalLayout.addWidget(self.label_14)
spacerItem = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem)
self.label_3 = QtWidgets.QLabel(self.groupBox_4)
self.label_3.setObjectName("label_3")
self.horizontalLayout.addWidget(self.label_3)
self.label_2 = ClickedLableGif(self.groupBox_4)
self.label_2.setText("")
self.label_2.setObjectName("label_2")
self.horizontalLayout.addWidget(self.label_2)
self.gridLayout.addLayout(self.horizontalLayout, 2, 0, 1, 3)
self.gridLayout_4.addWidget(self.groupBox_4, 0, 0, 1, 1)
self.groupBox_2 = QtWidgets.QGroupBox(ModelFinder)
self.groupBox_2.setCheckable(True)
self.groupBox_2.setChecked(False)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_5 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_5.setContentsMargins(3, 6, 3, 3)
self.gridLayout_5.setHorizontalSpacing(3)
self.gridLayout_5.setVerticalSpacing(2)
self.gridLayout_5.setObjectName("gridLayout_5")
self.radioButton = QtWidgets.QRadioButton(self.groupBox_2)
self.radioButton.setChecked(True)
self.radioButton.setObjectName("radioButton")
self.gridLayout_5.addWidget(self.radioButton, 0, 0, 1, 1)
self.radioButton_2 = QtWidgets.QRadioButton(self.groupBox_2)
self.radioButton_2.setObjectName("radioButton_2")
self.gridLayout_5.addWidget(self.radioButton_2, 0, 1, 1, 1)
self.checkBox_3 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_3.setObjectName("checkBox_3")
self.gridLayout_5.addWidget(self.checkBox_3, 0, 2, 1, 1)
self.textEdit = DblClickTexedit(self.groupBox_2)
self.textEdit.setLineWrapMode(QtWidgets.QTextEdit.NoWrap)
self.textEdit.setReadOnly(True)
self.textEdit.setObjectName("textEdit")
self.gridLayout_5.addWidget(self.textEdit, 1, 0, 1, 3)
self.gridLayout_4.addWidget(self.groupBox_2, 0, 1, 2, 1)
self.groupBox = QtWidgets.QGroupBox(ModelFinder)
self.groupBox.setObjectName("groupBox")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_24 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_24.setFont(font)
self.label_24.setObjectName("label_24")
self.gridLayout_2.addWidget(self.label_24, 0, 0, 1, 1)
self.label_22 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_22.setFont(font)
self.label_22.setObjectName("label_22")
self.gridLayout_2.addWidget(self.label_22, 1, 0, 1, 1)
self.comboBox_9 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_9.sizePolicy().hasHeightForWidth())
self.comboBox_9.setSizePolicy(sizePolicy)
self.comboBox_9.setMinimumSize(QtCore.QSize(114, 26))
self.comboBox_9.setMaximumSize(QtCore.QSize(16777215, 26))
self.comboBox_9.setStyleSheet("")
self.comboBox_9.setObjectName("comboBox_9")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.gridLayout_2.addWidget(self.comboBox_9, 1, 1, 1, 2)
self.label_25 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_25.setFont(font)
self.label_25.setObjectName("label_25")
self.gridLayout_2.addWidget(self.label_25, 2, 0, 1, 1)
self.comboBox_4 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_4.setObjectName("comboBox_4")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.gridLayout_2.addWidget(self.comboBox_4, 2, 1, 1, 2)
self.label_26 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_26.setFont(font)
self.label_26.setObjectName("label_26")
self.gridLayout_2.addWidget(self.label_26, 3, 0, 1, 1)
self.label_27 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_27.setFont(font)
self.label_27.setObjectName("label_27")
self.gridLayout_2.addWidget(self.label_27, 4, 0, 1, 1)
self.comboBox_6 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_6.sizePolicy().hasHeightForWidth())
self.comboBox_6.setSizePolicy(sizePolicy)
self.comboBox_6.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_6.setObjectName("comboBox_6")
self.gridLayout_2.addWidget(self.comboBox_6, 4, 1, 1, 1)
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_2.setAutoRepeat(False)
self.checkBox_2.setAutoExclusive(False)
self.checkBox_2.setObjectName("checkBox_2")
self.gridLayout_2.addWidget(self.checkBox_2, 4, 2, 1, 1)
self.comboBox_3 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_3.sizePolicy().hasHeightForWidth())
self.comboBox_3.setSizePolicy(sizePolicy)
self.comboBox_3.setMinimumSize(QtCore.QSize(153, 26))
self.comboBox_3.setObjectName("comboBox_3")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.gridLayout_2.addWidget(self.comboBox_3, 0, 1, 1, 2)
self.comboBox_5 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_5.sizePolicy().hasHeightForWidth())
self.comboBox_5.setSizePolicy(sizePolicy)
self.comboBox_5.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_5.setObjectName("comboBox_5")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.gridLayout_2.addWidget(self.comboBox_5, 3, 1, 1, 2)
self.gridLayout_4.addWidget(self.groupBox, 1, 0, 1, 1)
self.gridLayout_4.setColumnStretch(0, 9)
self.gridLayout_4.setColumnStretch(1, 7)
self.verticalLayout.addLayout(self.gridLayout_4)
self.groupBox_3 = QtWidgets.QGroupBox(ModelFinder)
self.groupBox_3.setObjectName("groupBox_3")
self.horizontalLayout_2 = QtWidgets.QHBoxLayout(self.groupBox_3)
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.pushButton = ArrowPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton.sizePolicy().hasHeightForWidth())
self.pushButton.setSizePolicy(sizePolicy)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon)
self.pushButton.setObjectName("pushButton")
self.horizontalLayout_2.addWidget(self.pushButton)
self.pushButton_continue = QtWidgets.QPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_continue.sizePolicy().hasHeightForWidth())
self.pushButton_continue.setSizePolicy(sizePolicy)
self.pushButton_continue.setLayoutDirection(QtCore.Qt.LeftToRight)
self.pushButton_continue.setAutoFillBackground(False)
icon1 = QtGui.QIcon()
icon1.addPixmap(
QtGui.QPixmap(
":/picture/resourses/Play-pause_button_play_stop_blue_pause.png"
), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_continue.setIcon(icon1)
self.pushButton_continue.setAutoExclusive(False)
self.pushButton_continue.setObjectName("pushButton_continue")
self.horizontalLayout_2.addWidget(self.pushButton_continue)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_2.sizePolicy().hasHeightForWidth())
self.pushButton_2.setSizePolicy(sizePolicy)
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon2)
self.pushButton_2.setObjectName("pushButton_2")
self.horizontalLayout_2.addWidget(self.pushButton_2)
self.verticalLayout.addWidget(self.groupBox_3)
self.groupBox_6 = QtWidgets.QGroupBox(ModelFinder)
self.groupBox_6.setObjectName("groupBox_6")
self.gridLayout_7 = QtWidgets.QGridLayout(self.groupBox_6)
self.gridLayout_7.setObjectName("gridLayout_7")
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox_6)
icon3 = QtGui.QIcon()
icon3.addPixmap(
QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_9.setIcon(icon3)
self.pushButton_9.setObjectName("pushButton_9")
self.gridLayout_7.addWidget(self.pushButton_9, 1, 0, 1, 1)
self.progressBar = QtWidgets.QProgressBar(self.groupBox_6)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout_7.addWidget(self.progressBar, 0, 0, 1, 1)
self.verticalLayout.addWidget(self.groupBox_6)
self.label_24.setBuddy(self.comboBox_3)
self.label_25.setBuddy(self.comboBox_3)
self.label_26.setBuddy(self.comboBox_3)
self.label_27.setBuddy(self.comboBox_3)
self.retranslateUi(ModelFinder)
QtCore.QMetaObject.connectSlotsByName(ModelFinder)
ModelFinder.setTabOrder(self.pushButton_3, self.pushButton_4)
ModelFinder.setTabOrder(self.pushButton_4, self.pushButton_9)
ModelFinder.setTabOrder(self.pushButton_9, self.lineEdit_2)
ModelFinder.setTabOrder(self.lineEdit_2, self.comboBox_3)
ModelFinder.setTabOrder(self.comboBox_3, self.lineEdit)
ModelFinder.setTabOrder(self.lineEdit, self.comboBox_4)
ModelFinder.setTabOrder(self.comboBox_4, self.comboBox_5)
ModelFinder.setTabOrder(self.comboBox_5, self.comboBox_6)
ModelFinder.setTabOrder(self.comboBox_6, self.pushButton_2)
ModelFinder.setTabOrder(self.pushButton_2, self.pushButton)
def retranslateUi(self, ModelFinder):
_translate = QtCore.QCoreApplication.translate
ModelFinder.setWindowTitle(_translate("ModelFinder", "ModelFinder"))
self.groupBox_4.setTitle(_translate("ModelFinder", "Input"))
self.label_5.setText(_translate("ModelFinder", "Alignment File:"))
self.lineEdit.setPlaceholderText(
_translate("ModelFinder",
"PHYLIP, FASTA, NEXUS, CLUSTAL format is ok"))
self.label_8.setText(_translate("ModelFinder", "Tree File:"))
self.lineEdit_2.setPlaceholderText(
_translate("ModelFinder", "Optional! (in newick format)"))
self.label_14.setText(
_translate(
"ModelFinder",
"<html><head/><body><p>Click <a href=\"http://www.iqtree.org/doc/\"><span style=\" text-decoration: underline; color:#0000ff;\">here</span></a> to learn more about <span style=\" font-weight:600; color:#ff0000;\">IQ-TREE</span></p></body></html>"
))
self.label_3.setText(_translate("ModelFinder", "Demo:"))
self.label_2.setToolTip(_translate("ModelFinder", "Brief example"))
self.groupBox_2.setTitle(_translate("ModelFinder", "Partition Mode"))
self.radioButton.setText(_translate("ModelFinder", "Edge-linked"))
self.radioButton_2.setText(_translate("ModelFinder", "Edge-unlinked"))
self.checkBox_3.setText(_translate("ModelFinder", "Merge"))
self.textEdit.setToolTip(
_translate("ModelFinder", "Double-click to edit partition"))
self.groupBox.setTitle(_translate("ModelFinder", "Parameters"))
self.label_24.setText(_translate("ModelFinder", "Sequence Type:"))
self.label_22.setText(_translate("ModelFinder", "Code Table:"))
self.comboBox_9.setItemText(
0, _translate("ModelFinder", "1 The standard code"))
self.comboBox_9.setItemText(
1, _translate("ModelFinder", "2 Vertebrate mitochondrial code"))
self.comboBox_9.setItemText(
2, _translate("ModelFinder", "3 The Yeast Mitochondrial Code"))
self.comboBox_9.setItemText(
3,
_translate(
"ModelFinder",
"4 Mold, Protozoan, and Coelenterate Mitochondrial code and Mycoplasma/Spiroplasma code"
))
self.comboBox_9.setItemText(
4, _translate("ModelFinder", "5 Invertebrate mitochondrial"))
self.comboBox_9.setItemText(
5,
_translate(
"ModelFinder",
"6 The Ciliate, Dasycladacean and Hexamita Nuclear Code"))
self.comboBox_9.setItemText(
6,
_translate("ModelFinder",
"9 Echinoderm and Flatworm mitochondrial code"))
self.comboBox_9.setItemText(
7, _translate("ModelFinder", "10 The Euplotid Nuclear Code"))
self.comboBox_9.setItemText(
8,
_translate("ModelFinder",
"11 The Bacterial, Archaeal and Plant Plastid Code"))
self.comboBox_9.setItemText(
9,
_translate("ModelFinder", "12 The Alternative Yeast Nuclear Code"))
self.comboBox_9.setItemText(
10, _translate("ModelFinder", "13 Ascidian mitochondrial code"))
self.comboBox_9.setItemText(
11,
_translate("ModelFinder",
"14 Alternative flatworm mitochondrial code"))
self.comboBox_9.setItemText(
12, _translate("ModelFinder",
"16 Chlorophycean Mitochondrial Code"))
self.comboBox_9.setItemText(
13, _translate("ModelFinder", "21 Trematode Mitochondrial Code"))
self.comboBox_9.setItemText(
14,
_translate("ModelFinder",
"22 Scenedesmus obliquus Mitochondrial Code"))
self.comboBox_9.setItemText(
15,
_translate("ModelFinder",
"23 Thraustochytrium Mitochondrial Code"))
self.comboBox_9.setItemText(
16, _translate("ModelFinder",
"24 Pterobranchia Mitochondrial Code"))
self.comboBox_9.setItemText(
17,
_translate("ModelFinder",
"25 Candidate Division SR1 and Gracilibacteria Code"))
self.label_25.setText(_translate("ModelFinder", "Criterion:"))
self.comboBox_4.setItemText(
0, _translate("ModelFinder",
"Bayesian information criterion (BIC)"))
self.comboBox_4.setItemText(
1, _translate("ModelFinder", "Corrected AIC (AICc)"))
self.comboBox_4.setItemText(
2, _translate("ModelFinder", "Akaike information criterion (AIC)"))
self.label_26.setText(_translate("ModelFinder", "Model for:"))
self.label_27.setText(_translate("ModelFinder", "Threads:"))
self.checkBox_2.setText(
_translate("ModelFinder", "FreeRate heterogeneity [+R]"))
self.comboBox_3.setItemText(0, _translate("ModelFinder",
"Auto detect"))
self.comboBox_3.setItemText(1, _translate("ModelFinder", "DNA"))
self.comboBox_3.setItemText(2, _translate("ModelFinder", "Protein"))
self.comboBox_3.setItemText(3, _translate("ModelFinder", "Codon"))
self.comboBox_3.setItemText(4, _translate("ModelFinder", "Binary"))
self.comboBox_3.setItemText(5, _translate("ModelFinder", "Morphology"))
self.comboBox_3.setItemText(6, _translate("ModelFinder", "DNA-->AA"))
self.comboBox_5.setItemText(0, _translate("ModelFinder", "IQ-TREE"))
self.comboBox_5.setItemText(1, _translate("ModelFinder", "Mrbayes"))
self.comboBox_5.setItemText(2, _translate("ModelFinder", "RAxML"))
self.comboBox_5.setItemText(3, _translate("ModelFinder", "PhyML"))
self.comboBox_5.setItemText(4, _translate("ModelFinder",
"BEAST1 (NUC)"))
self.comboBox_5.setItemText(5, _translate("ModelFinder",
"BEAST2 (NUC)"))
self.comboBox_5.setItemText(6, _translate("ModelFinder", "BEAST (AA)"))
self.groupBox_3.setTitle(_translate("ModelFinder", "Run"))
self.pushButton.setText(_translate("ModelFinder", "Start"))
self.pushButton_continue.setText(
_translate("ModelFinder", "Continue Previous Analysis"))
self.pushButton_2.setText(_translate("ModelFinder", "Stop"))
self.groupBox_6.setTitle(_translate("ModelFinder", "Progress"))
self.pushButton_9.setText(_translate("ModelFinder", "Show log"))
class Ui_IQTREE(object):
def setupUi(self, IQTREE):
IQTREE.setObjectName("IQTREE")
IQTREE.resize(849, 553)
self.gridLayout_5 = QtWidgets.QGridLayout(IQTREE)
self.gridLayout_5.setObjectName("gridLayout_5")
self.scrollArea = QtWidgets.QScrollArea(IQTREE)
self.scrollArea.setFrameShape(QtWidgets.QFrame.NoFrame)
self.scrollArea.setLineWidth(0)
self.scrollArea.setWidgetResizable(True)
self.scrollArea.setObjectName("scrollArea")
self.scrollAreaWidgetContents = QtWidgets.QWidget()
self.scrollAreaWidgetContents.setGeometry(QtCore.QRect(0, 0, 831, 535))
self.scrollAreaWidgetContents.setObjectName("scrollAreaWidgetContents")
self.verticalLayout = QtWidgets.QVBoxLayout(self.scrollAreaWidgetContents)
self.verticalLayout.setObjectName("verticalLayout")
self.groupBox_4 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_4.setObjectName("groupBox_4")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(self.groupBox_4)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.horizontalLayout_6 = QtWidgets.QHBoxLayout()
self.horizontalLayout_6.setObjectName("horizontalLayout_6")
self.gridLayout_2 = QtWidgets.QGridLayout()
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setObjectName("label_5")
self.gridLayout_2.addWidget(self.label_5, 0, 0, 1, 1)
self.comboBox_11 = ListQCombobox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_11.sizePolicy().hasHeightForWidth())
self.comboBox_11.setSizePolicy(sizePolicy)
self.comboBox_11.setAcceptDrops(True)
self.comboBox_11.setEditable(True)
self.comboBox_11.setSizeAdjustPolicy(QtWidgets.QComboBox.AdjustToMinimumContentsLength)
self.comboBox_11.setObjectName("comboBox_11")
self.gridLayout_2.addWidget(self.comboBox_11, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout_2.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.checkBox_8 = QtWidgets.QCheckBox(self.groupBox_4)
self.checkBox_8.setObjectName("checkBox_8")
self.gridLayout_2.addWidget(self.checkBox_8, 1, 0, 1, 1)
self.lineEdit_3 = InputQLineEdit(self.groupBox_4)
self.lineEdit_3.setEnabled(False)
self.lineEdit_3.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit_3.setReadOnly(True)
self.lineEdit_3.setObjectName("lineEdit_3")
self.gridLayout_2.addWidget(self.lineEdit_3, 1, 1, 1, 1)
self.pushButton_22 = QtWidgets.QPushButton(self.groupBox_4)
self.pushButton_22.setEnabled(False)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_22.sizePolicy().hasHeightForWidth())
self.pushButton_22.setSizePolicy(sizePolicy)
self.pushButton_22.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_22.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_22.setStyleSheet("")
self.pushButton_22.setText("")
self.pushButton_22.setObjectName("pushButton_22")
self.gridLayout_2.addWidget(self.pushButton_22, 1, 2, 1, 1)
self.horizontalLayout_6.addLayout(self.gridLayout_2)
self.gridLayout_6 = QtWidgets.QGridLayout()
self.gridLayout_6.setObjectName("gridLayout_6")
self.label_24 = QtWidgets.QLabel(self.groupBox_4)
font = QtGui.QFont()
font.setPointSize(10)
self.label_24.setFont(font)
self.label_24.setObjectName("label_24")
self.gridLayout_6.addWidget(self.label_24, 0, 0, 1, 1)
self.comboBox_3 = QtWidgets.QComboBox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_3.sizePolicy().hasHeightForWidth())
self.comboBox_3.setSizePolicy(sizePolicy)
self.comboBox_3.setMinimumSize(QtCore.QSize(100, 26))
self.comboBox_3.setObjectName("comboBox_3")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.comboBox_3.addItem("")
self.gridLayout_6.addWidget(self.comboBox_3, 0, 1, 1, 2)
self.label_8 = QtWidgets.QLabel(self.groupBox_4)
self.label_8.setObjectName("label_8")
self.gridLayout_6.addWidget(self.label_8, 1, 0, 1, 2)
self.comboBox_5 = QtWidgets.QComboBox(self.groupBox_4)
self.comboBox_5.setEnabled(True)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_5.sizePolicy().hasHeightForWidth())
self.comboBox_5.setSizePolicy(sizePolicy)
self.comboBox_5.setMinimumSize(QtCore.QSize(95, 26))
self.comboBox_5.setObjectName("comboBox_5")
self.comboBox_5.addItem("")
self.comboBox_5.addItem("")
self.gridLayout_6.addWidget(self.comboBox_5, 1, 2, 1, 1)
self.horizontalLayout_6.addLayout(self.gridLayout_6)
self.horizontalLayout_6.setStretch(0, 5)
self.horizontalLayout_6.setStretch(1, 2)
self.verticalLayout_2.addLayout(self.horizontalLayout_6)
self.horizontalLayout_7 = QtWidgets.QHBoxLayout()
self.horizontalLayout_7.setObjectName("horizontalLayout_7")
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_22 = QtWidgets.QLabel(self.groupBox_4)
font = QtGui.QFont()
font.setPointSize(10)
self.label_22.setFont(font)
self.label_22.setObjectName("label_22")
self.horizontalLayout_2.addWidget(self.label_22)
self.comboBox_9 = QtWidgets.QComboBox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_9.sizePolicy().hasHeightForWidth())
self.comboBox_9.setSizePolicy(sizePolicy)
self.comboBox_9.setMinimumSize(QtCore.QSize(114, 26))
self.comboBox_9.setMaximumSize(QtCore.QSize(16777215, 26))
self.comboBox_9.setStyleSheet("")
self.comboBox_9.setObjectName("comboBox_9")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.horizontalLayout_2.addWidget(self.comboBox_9)
self.horizontalLayout_7.addLayout(self.horizontalLayout_2)
self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
self.horizontalLayout_3.setObjectName("horizontalLayout_3")
self.checkBox_9 = QtWidgets.QCheckBox(self.groupBox_4)
self.checkBox_9.setChecked(True)
self.checkBox_9.setObjectName("checkBox_9")
self.horizontalLayout_3.addWidget(self.checkBox_9)
self.comboBox_10 = CheckableComboBox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_10.sizePolicy().hasHeightForWidth())
self.comboBox_10.setSizePolicy(sizePolicy)
self.comboBox_10.setMinimumSize(QtCore.QSize(95, 26))
self.comboBox_10.setObjectName("comboBox_10")
self.horizontalLayout_3.addWidget(self.comboBox_10)
self.horizontalLayout_7.addLayout(self.horizontalLayout_3)
self.horizontalLayout_7.setStretch(0, 1)
self.horizontalLayout_7.setStretch(1, 1)
self.verticalLayout_2.addLayout(self.horizontalLayout_7)
self.horizontalLayout_5 = QtWidgets.QHBoxLayout()
self.horizontalLayout_5.setObjectName("horizontalLayout_5")
self.label_14 = QtWidgets.QLabel(self.groupBox_4)
self.label_14.setOpenExternalLinks(True)
self.label_14.setObjectName("label_14")
self.horizontalLayout_5.addWidget(self.label_14)
spacerItem = QtWidgets.QSpacerItem(40, 20, QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout_5.addItem(spacerItem)
self.label_3 = QtWidgets.QLabel(self.groupBox_4)
self.label_3.setObjectName("label_3")
self.horizontalLayout_5.addWidget(self.label_3)
self.label = ClickedLableGif(self.groupBox_4)
self.label.setText("")
self.label.setObjectName("label")
self.horizontalLayout_5.addWidget(self.label)
self.verticalLayout_2.addLayout(self.horizontalLayout_5)
self.verticalLayout.addWidget(self.groupBox_4)
self.groupBox = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox.setToolTip("")
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.label_25 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_25.setFont(font)
self.label_25.setAlignment(QtCore.Qt.AlignRight|QtCore.Qt.AlignTrailing|QtCore.Qt.AlignVCenter)
self.label_25.setObjectName("label_25")
self.gridLayout.addWidget(self.label_25, 0, 0, 1, 1)
self.comboBox_7 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_7.sizePolicy().hasHeightForWidth())
self.comboBox_7.setSizePolicy(sizePolicy)
self.comboBox_7.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_7.setObjectName("comboBox_7")
self.gridLayout.addWidget(self.comboBox_7, 0, 1, 1, 1)
self.label_27 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_27.setFont(font)
self.label_27.setAlignment(QtCore.Qt.AlignRight|QtCore.Qt.AlignTrailing|QtCore.Qt.AlignVCenter)
self.label_27.setObjectName("label_27")
self.gridLayout.addWidget(self.label_27, 0, 2, 1, 1)
self.comboBox_6 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_6.sizePolicy().hasHeightForWidth())
self.comboBox_6.setSizePolicy(sizePolicy)
self.comboBox_6.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_6.setObjectName("comboBox_6")
self.gridLayout.addWidget(self.comboBox_6, 0, 3, 1, 1)
self.horizontalLayout_4 = QtWidgets.QHBoxLayout()
self.horizontalLayout_4.setObjectName("horizontalLayout_4")
self.label_29 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_29.setFont(font)
self.label_29.setObjectName("label_29")
self.horizontalLayout_4.addWidget(self.label_29)
self.checkBox_3 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_3.setObjectName("checkBox_3")
self.horizontalLayout_4.addWidget(self.checkBox_3)
self.checkBox_4 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_4.setObjectName("checkBox_4")
self.horizontalLayout_4.addWidget(self.checkBox_4)
self.gridLayout.addLayout(self.horizontalLayout_4, 0, 4, 1, 1)
self.label_26 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_26.setFont(font)
self.label_26.setObjectName("label_26")
self.gridLayout.addWidget(self.label_26, 1, 0, 1, 1)
self.comboBox_4 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_4.setObjectName("comboBox_4")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.gridLayout.addWidget(self.comboBox_4, 1, 1, 1, 1)
self.label_28 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_28.setFont(font)
self.label_28.setObjectName("label_28")
self.gridLayout.addWidget(self.label_28, 1, 2, 1, 1)
self.spinBox = QtWidgets.QSpinBox(self.groupBox)
self.spinBox.setMinimum(2)
self.spinBox.setMaximum(64)
self.spinBox.setProperty("value", 4)
self.spinBox.setObjectName("spinBox")
self.gridLayout.addWidget(self.spinBox, 1, 3, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_2.setAutoRepeat(False)
self.checkBox_2.setAutoExclusive(False)
self.checkBox_2.setObjectName("checkBox_2")
self.horizontalLayout.addWidget(self.checkBox_2)
self.checkBox = QtWidgets.QCheckBox(self.groupBox)
self.checkBox.setObjectName("checkBox")
self.horizontalLayout.addWidget(self.checkBox)
self.gridLayout.addLayout(self.horizontalLayout, 1, 4, 1, 1)
self.verticalLayout.addWidget(self.groupBox)
self.groupBox_2 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_2.setObjectName("groupBox_2")
self.gridLayout_3 = QtWidgets.QGridLayout(self.groupBox_2)
self.gridLayout_3.setObjectName("gridLayout_3")
self.label_30 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_30.setFont(font)
self.label_30.setObjectName("label_30")
self.gridLayout_3.addWidget(self.label_30, 0, 0, 1, 1)
self.comboBox_8 = QtWidgets.QComboBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.comboBox_8.sizePolicy().hasHeightForWidth())
self.comboBox_8.setSizePolicy(sizePolicy)
self.comboBox_8.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_8.setObjectName("comboBox_8")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.gridLayout_3.addWidget(self.comboBox_8, 0, 1, 1, 1)
self.label_35 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_35.setFont(font)
self.label_35.setObjectName("label_35")
self.gridLayout_3.addWidget(self.label_35, 0, 2, 1, 1)
self.spinBox_3 = QtWidgets.QSpinBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.spinBox_3.sizePolicy().hasHeightForWidth())
self.spinBox_3.setSizePolicy(sizePolicy)
self.spinBox_3.setMinimum(100)
self.spinBox_3.setMaximum(1000000)
self.spinBox_3.setSingleStep(10)
self.spinBox_3.setProperty("value", 5000)
self.spinBox_3.setObjectName("spinBox_3")
self.gridLayout_3.addWidget(self.spinBox_3, 0, 3, 1, 1)
self.checkBox_5 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_5.setChecked(True)
self.checkBox_5.setObjectName("checkBox_5")
self.gridLayout_3.addWidget(self.checkBox_5, 0, 4, 1, 1)
self.checkBox_7 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_7.setObjectName("checkBox_7")
self.gridLayout_3.addWidget(self.checkBox_7, 0, 5, 1, 2)
self.label_36 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_36.setFont(font)
self.label_36.setObjectName("label_36")
self.gridLayout_3.addWidget(self.label_36, 1, 0, 1, 1)
self.spinBox_4 = QtWidgets.QSpinBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.spinBox_4.sizePolicy().hasHeightForWidth())
self.spinBox_4.setSizePolicy(sizePolicy)
self.spinBox_4.setMinimum(1000)
self.spinBox_4.setMaximum(100000000)
self.spinBox_4.setSingleStep(100)
self.spinBox_4.setObjectName("spinBox_4")
self.gridLayout_3.addWidget(self.spinBox_4, 1, 1, 1, 1)
self.label_37 = QtWidgets.QLabel(self.groupBox_2)
font = QtGui.QFont()
font.setPointSize(10)
self.label_37.setFont(font)
self.label_37.setObjectName("label_37")
self.gridLayout_3.addWidget(self.label_37, 1, 2, 1, 1)
self.doubleSpinBox = QtWidgets.QDoubleSpinBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.doubleSpinBox.sizePolicy().hasHeightForWidth())
self.doubleSpinBox.setSizePolicy(sizePolicy)
self.doubleSpinBox.setMinimum(0.9)
self.doubleSpinBox.setMaximum(0.99)
self.doubleSpinBox.setSingleStep(0.01)
self.doubleSpinBox.setObjectName("doubleSpinBox")
self.gridLayout_3.addWidget(self.doubleSpinBox, 1, 3, 1, 1)
self.checkBox_6 = QtWidgets.QCheckBox(self.groupBox_2)
self.checkBox_6.setChecked(True)
self.checkBox_6.setObjectName("checkBox_6")
self.gridLayout_3.addWidget(self.checkBox_6, 1, 4, 1, 2)
self.spinBox_5 = QtWidgets.QSpinBox(self.groupBox_2)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.spinBox_5.sizePolicy().hasHeightForWidth())
self.spinBox_5.setSizePolicy(sizePolicy)
self.spinBox_5.setToolTip("")
self.spinBox_5.setMinimum(1000)
self.spinBox_5.setMaximum(100000000)
self.spinBox_5.setSingleStep(100)
self.spinBox_5.setObjectName("spinBox_5")
self.gridLayout_3.addWidget(self.spinBox_5, 1, 6, 1, 2)
self.verticalLayout.addWidget(self.groupBox_2)
self.groupBox_3 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_3.setObjectName("groupBox_3")
self.horizontalLayout_8 = QtWidgets.QHBoxLayout(self.groupBox_3)
self.horizontalLayout_8.setObjectName("horizontalLayout_8")
self.pushButton = ArrowPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton.sizePolicy().hasHeightForWidth())
self.pushButton.setSizePolicy(sizePolicy)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/if_start_60207.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon)
self.pushButton.setObjectName("pushButton")
self.horizontalLayout_8.addWidget(self.pushButton)
self.pushButton_continue = QtWidgets.QPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_continue.sizePolicy().hasHeightForWidth())
self.pushButton_continue.setSizePolicy(sizePolicy)
self.pushButton_continue.setLayoutDirection(QtCore.Qt.LeftToRight)
self.pushButton_continue.setAutoFillBackground(False)
icon1 = QtGui.QIcon()
icon1.addPixmap(QtGui.QPixmap(":/picture/resourses/Play-pause_button_play_stop_blue_pause.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_continue.setIcon(icon1)
self.pushButton_continue.setAutoExclusive(False)
self.pushButton_continue.setObjectName("pushButton_continue")
self.horizontalLayout_8.addWidget(self.pushButton_continue)
self.pushButton_2 = QtWidgets.QPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(self.pushButton_2.sizePolicy().hasHeightForWidth())
self.pushButton_2.setSizePolicy(sizePolicy)
icon2 = QtGui.QIcon()
icon2.addPixmap(QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon2)
self.pushButton_2.setObjectName("pushButton_2")
self.horizontalLayout_8.addWidget(self.pushButton_2)
self.verticalLayout.addWidget(self.groupBox_3)
self.groupBox_6 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_6.setObjectName("groupBox_6")
self.gridLayout_7 = QtWidgets.QGridLayout(self.groupBox_6)
self.gridLayout_7.setObjectName("gridLayout_7")
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox_6)
icon3 = QtGui.QIcon()
icon3.addPixmap(QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_9.setIcon(icon3)
self.pushButton_9.setObjectName("pushButton_9")
self.gridLayout_7.addWidget(self.pushButton_9, 1, 0, 1, 1)
self.progressBar = QtWidgets.QProgressBar(self.groupBox_6)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.gridLayout_7.addWidget(self.progressBar, 0, 0, 1, 1)
self.verticalLayout.addWidget(self.groupBox_6)
self.scrollArea.setWidget(self.scrollAreaWidgetContents)
self.gridLayout_5.addWidget(self.scrollArea, 0, 0, 1, 1)
self.label_24.setBuddy(self.comboBox_3)
self.retranslateUi(IQTREE)
self.checkBox_2.toggled['bool'].connect(self.checkBox_3.setDisabled)
self.checkBox_2.toggled['bool'].connect(self.checkBox_4.setDisabled)
self.checkBox_6.toggled['bool'].connect(self.spinBox_5.setEnabled)
self.checkBox_2.toggled['bool'].connect(self.label_29.setDisabled)
self.checkBox_9.clicked['bool'].connect(self.comboBox_10.setEnabled)
QtCore.QMetaObject.connectSlotsByName(IQTREE)
IQTREE.setTabOrder(self.pushButton_3, self.lineEdit_3)
IQTREE.setTabOrder(self.lineEdit_3, self.pushButton_9)
IQTREE.setTabOrder(self.pushButton_9, self.pushButton_22)
IQTREE.setTabOrder(self.pushButton_22, self.pushButton_2)
IQTREE.setTabOrder(self.pushButton_2, self.pushButton)
def retranslateUi(self, IQTREE):
_translate = QtCore.QCoreApplication.translate
IQTREE.setWindowTitle(_translate("IQTREE", "IQ-TREE"))
self.groupBox_4.setTitle(_translate("IQTREE", "Input"))
self.label_5.setText(_translate("IQTREE", "Alignment File:"))
self.checkBox_8.setText(_translate("IQTREE", "Partition Mode:"))
self.lineEdit_3.setPlaceholderText(_translate("IQTREE", "Optional!"))
self.label_24.setText(_translate("IQTREE", "Seq. Type:"))
self.comboBox_3.setItemText(0, _translate("IQTREE", "Auto detect"))
self.comboBox_3.setItemText(1, _translate("IQTREE", "DNA"))
self.comboBox_3.setItemText(2, _translate("IQTREE", "Protein"))
self.comboBox_3.setItemText(3, _translate("IQTREE", "Codon"))
self.comboBox_3.setItemText(4, _translate("IQTREE", "Binary"))
self.comboBox_3.setItemText(5, _translate("IQTREE", "Morphology"))
self.comboBox_3.setItemText(6, _translate("IQTREE", "DNA-->AA"))
self.label_8.setText(_translate("IQTREE", "Partition Style:"))
self.comboBox_5.setItemText(0, _translate("IQTREE", "Edge-linked"))
self.comboBox_5.setItemText(1, _translate("IQTREE", "Edge-unlinked"))
self.label_22.setText(_translate("IQTREE", "Code Table:"))
self.comboBox_9.setItemText(0, _translate("IQTREE", "1 The standard code"))
self.comboBox_9.setItemText(1, _translate("IQTREE", "2 Vertebrate mitochondrial code"))
self.comboBox_9.setItemText(2, _translate("IQTREE", "3 The Yeast Mitochondrial Code"))
self.comboBox_9.setItemText(3, _translate("IQTREE", "4 Mold, Protozoan, and Coelenterate Mitochondrial code and Mycoplasma/Spiroplasma code"))
self.comboBox_9.setItemText(4, _translate("IQTREE", "5 Invertebrate mitochondrial"))
self.comboBox_9.setItemText(5, _translate("IQTREE", "6 The Ciliate, Dasycladacean and Hexamita Nuclear Code"))
self.comboBox_9.setItemText(6, _translate("IQTREE", "9 Echinoderm and Flatworm mitochondrial code"))
self.comboBox_9.setItemText(7, _translate("IQTREE", "10 The Euplotid Nuclear Code"))
self.comboBox_9.setItemText(8, _translate("IQTREE", "11 The Bacterial, Archaeal and Plant Plastid Code"))
self.comboBox_9.setItemText(9, _translate("IQTREE", "12 The Alternative Yeast Nuclear Code"))
self.comboBox_9.setItemText(10, _translate("IQTREE", "13 Ascidian mitochondrial code"))
self.comboBox_9.setItemText(11, _translate("IQTREE", "14 Alternative flatworm mitochondrial code"))
self.comboBox_9.setItemText(12, _translate("IQTREE", "16 Chlorophycean Mitochondrial Code"))
self.comboBox_9.setItemText(13, _translate("IQTREE", "21 Trematode Mitochondrial Code"))
self.comboBox_9.setItemText(14, _translate("IQTREE", "22 Scenedesmus obliquus Mitochondrial Code"))
self.comboBox_9.setItemText(15, _translate("IQTREE", "23 Thraustochytrium Mitochondrial Code"))
self.comboBox_9.setItemText(16, _translate("IQTREE", "24 Pterobranchia Mitochondrial Code"))
self.comboBox_9.setItemText(17, _translate("IQTREE", "25 Candidate Division SR1 and Gracilibacteria Code"))
self.checkBox_9.setText(_translate("IQTREE", "Outgroup (s):"))
self.label_14.setText(_translate("IQTREE", "<html><head/><body><p>Click <a href=\"http://www.iqtree.org/doc/\"><span style=\" text-decoration: underline; color:#0000ff;\">here</span></a> to learn more about <span style=\" font-weight:600; color:#ff0000;\">IQ-TREE</span></p></body></html>"))
self.label_3.setText(_translate("IQTREE", "Demo:"))
self.label.setToolTip(_translate("IQTREE", "Brief example"))
self.groupBox.setTitle(_translate("IQTREE", "Substitution Model Options"))
self.label_25.setText(_translate("IQTREE", "Models:"))
self.label_27.setText(_translate("IQTREE", "Threads:"))
self.label_29.setText(_translate("IQTREE", "Rate heterogeneity:"))
self.checkBox_3.setToolTip(_translate("IQTREE", "Discrete Gamma model"))
self.checkBox_3.setText(_translate("IQTREE", "[+G]"))
self.checkBox_4.setToolTip(_translate("IQTREE", "Allowing for a proportion of invariable sites"))
self.checkBox_4.setText(_translate("IQTREE", "[+I]"))
self.label_26.setText(_translate("IQTREE", "State freq:"))
self.comboBox_4.setItemText(0, _translate("IQTREE", "Empirical (from data)"))
self.comboBox_4.setItemText(1, _translate("IQTREE", "AA model (from matrix)"))
self.comboBox_4.setItemText(2, _translate("IQTREE", "ML-optimized"))
self.comboBox_4.setItemText(3, _translate("IQTREE", "Codon F1X4"))
self.comboBox_4.setItemText(4, _translate("IQTREE", "Codon F3X4"))
self.label_28.setText(_translate("IQTREE", "#rate categories:"))
self.checkBox_2.setText(_translate("IQTREE", "FreeRate heterogeneity [+R]"))
self.checkBox.setToolTip(_translate("IQTREE", "Ascertainment bias correction"))
self.checkBox.setText(_translate("IQTREE", "[+ASC]"))
self.groupBox_2.setTitle(_translate("IQTREE", "Branch Support Analysis"))
self.label_30.setToolTip(_translate("IQTREE", "Bootstrap analysis"))
self.label_30.setText(_translate("IQTREE", "Bootstrap:"))
self.comboBox_8.setItemText(0, _translate("IQTREE", "Ultrafast"))
self.comboBox_8.setItemText(1, _translate("IQTREE", "Standard"))
self.comboBox_8.setItemText(2, _translate("IQTREE", "None"))
self.label_35.setText(_translate("IQTREE", "Num of bootstrap:"))
self.checkBox_5.setToolTip(_translate("IQTREE", "Write bootstrap trees to .ufboot file"))
self.checkBox_5.setText(_translate("IQTREE", "Create .ufboot file"))
self.checkBox_7.setText(_translate("IQTREE", "Approximate Bayes test"))
self.label_36.setToolTip(_translate("IQTREE", "Maximum iterations"))
self.label_36.setText(_translate("IQTREE", "Max. iter.:"))
self.spinBox_4.setToolTip(_translate("IQTREE", "Maximum iterations"))
self.label_37.setToolTip(_translate("IQTREE", "Minimum correlation coefficient"))
self.label_37.setText(_translate("IQTREE", "Minimum cor. coef.:"))
self.doubleSpinBox.setToolTip(_translate("IQTREE", "Minimum correlation coefficient"))
self.checkBox_6.setText(_translate("IQTREE", "SH-aLRT branch test | replicates:"))
self.groupBox_3.setTitle(_translate("IQTREE", "Run"))
self.pushButton.setText(_translate("IQTREE", "Start"))
self.pushButton_continue.setText(_translate("IQTREE", "Continue Previous Analysis"))
self.pushButton_2.setText(_translate("IQTREE", "Stop"))
self.groupBox_6.setTitle(_translate("IQTREE", "Progress"))
self.pushButton_9.setText(_translate("IQTREE", "Show log"))
class Ui_MrBayes(object):
def setupUi(self, MrBayes):
MrBayes.setObjectName("MrBayes")
MrBayes.resize(574, 636)
self.verticalLayout_3 = QtWidgets.QVBoxLayout(MrBayes)
self.verticalLayout_3.setObjectName("verticalLayout_3")
self.scrollArea = QtWidgets.QScrollArea(MrBayes)
self.scrollArea.setFrameShape(QtWidgets.QFrame.NoFrame)
self.scrollArea.setWidgetResizable(True)
self.scrollArea.setObjectName("scrollArea")
self.scrollAreaWidgetContents = QtWidgets.QWidget()
self.scrollAreaWidgetContents.setGeometry(QtCore.QRect(0, 0, 556, 618))
self.scrollAreaWidgetContents.setObjectName("scrollAreaWidgetContents")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(
self.scrollAreaWidgetContents)
self.verticalLayout_2.setContentsMargins(0, 0, 0, 0)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.groupBox_4 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_4.setObjectName("groupBox_4")
self.gridLayout_2 = QtWidgets.QGridLayout(self.groupBox_4)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_5 = QtWidgets.QLabel(self.groupBox_4)
self.label_5.setObjectName("label_5")
self.gridLayout_2.addWidget(self.label_5, 0, 0, 1, 1)
self.lineEdit = InputQLineEdit(self.groupBox_4)
self.lineEdit.setCursor(QtGui.QCursor(QtCore.Qt.ArrowCursor))
self.lineEdit.setText("")
self.lineEdit.setReadOnly(True)
self.lineEdit.setObjectName("lineEdit")
self.gridLayout_2.addWidget(self.lineEdit, 0, 1, 1, 1)
self.pushButton_3 = QtWidgets.QPushButton(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Fixed,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_3.sizePolicy().hasHeightForWidth())
self.pushButton_3.setSizePolicy(sizePolicy)
self.pushButton_3.setMinimumSize(QtCore.QSize(30, 26))
self.pushButton_3.setMaximumSize(QtCore.QSize(30, 26))
self.pushButton_3.setStyleSheet("")
self.pushButton_3.setText("")
self.pushButton_3.setObjectName("pushButton_3")
self.gridLayout_2.addWidget(self.pushButton_3, 0, 2, 1, 1)
self.label_31 = QtWidgets.QLabel(self.groupBox_4)
font = QtGui.QFont()
font.setPointSize(10)
self.label_31.setFont(font)
self.label_31.setObjectName("label_31")
self.gridLayout_2.addWidget(self.label_31, 1, 0, 1, 1)
self.horizontalLayout = QtWidgets.QHBoxLayout()
self.horizontalLayout.setObjectName("horizontalLayout")
self.label_14 = QtWidgets.QLabel(self.groupBox_4)
self.label_14.setOpenExternalLinks(True)
self.label_14.setObjectName("label_14")
self.horizontalLayout.addWidget(self.label_14)
spacerItem = QtWidgets.QSpacerItem(40, 20,
QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Minimum)
self.horizontalLayout.addItem(spacerItem)
self.checkBox_3 = QtWidgets.QCheckBox(self.groupBox_4)
self.checkBox_3.setChecked(True)
self.checkBox_3.setObjectName("checkBox_3")
self.horizontalLayout.addWidget(self.checkBox_3)
self.label_9 = ClickedLableGif(self.groupBox_4)
self.label_9.setText("")
self.label_9.setObjectName("label_9")
self.horizontalLayout.addWidget(self.label_9)
self.gridLayout_2.addLayout(self.horizontalLayout, 2, 0, 1, 3)
self.comboBox_5 = CheckableComboBox(self.groupBox_4)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_5.sizePolicy().hasHeightForWidth())
self.comboBox_5.setSizePolicy(sizePolicy)
self.comboBox_5.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_5.setObjectName("comboBox_5")
self.gridLayout_2.addWidget(self.comboBox_5, 1, 1, 1, 1)
self.verticalLayout_2.addWidget(self.groupBox_4)
self.groupBox = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox.setToolTip("")
self.groupBox.setObjectName("groupBox")
self.gridLayout = QtWidgets.QGridLayout(self.groupBox)
self.gridLayout.setObjectName("gridLayout")
self.label_25 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_25.setFont(font)
self.label_25.setObjectName("label_25")
self.gridLayout.addWidget(self.label_25, 0, 0, 1, 1)
self.comboBox_7 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_7.sizePolicy().hasHeightForWidth())
self.comboBox_7.setSizePolicy(sizePolicy)
self.comboBox_7.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_7.setObjectName("comboBox_7")
self.gridLayout.addWidget(self.comboBox_7, 0, 1, 1, 1)
self.pushButton_partition = QtWidgets.QPushButton(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_partition.sizePolicy().hasHeightForWidth())
self.pushButton_partition.setSizePolicy(sizePolicy)
self.pushButton_partition.setLayoutDirection(QtCore.Qt.LeftToRight)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/picture/resourses/pie-chart.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_partition.setIcon(icon)
self.pushButton_partition.setCheckable(True)
self.pushButton_partition.setObjectName("pushButton_partition")
self.gridLayout.addWidget(self.pushButton_partition, 0, 2, 1, 1)
self.checkBox_4 = QtWidgets.QCheckBox(self.groupBox)
self.checkBox_4.setObjectName("checkBox_4")
self.gridLayout.addWidget(self.checkBox_4, 1, 0, 1, 1)
self.comboBox_10 = QtWidgets.QComboBox(self.groupBox)
self.comboBox_10.setEnabled(False)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_10.sizePolicy().hasHeightForWidth())
self.comboBox_10.setSizePolicy(sizePolicy)
self.comboBox_10.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_10.setObjectName("comboBox_10")
self.gridLayout.addWidget(self.comboBox_10, 1, 1, 1, 1)
self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
self.horizontalLayout_2.setObjectName("horizontalLayout_2")
self.label_28 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_28.setFont(font)
self.label_28.setObjectName("label_28")
self.horizontalLayout_2.addWidget(self.label_28)
self.spinBox = QtWidgets.QSpinBox(self.groupBox)
self.spinBox.setMinimum(2)
self.spinBox.setMaximum(64)
self.spinBox.setProperty("value", 4)
self.spinBox.setObjectName("spinBox")
self.horizontalLayout_2.addWidget(self.spinBox)
self.gridLayout.addLayout(self.horizontalLayout_2, 1, 2, 1, 1)
self.label_26 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_26.setFont(font)
self.label_26.setObjectName("label_26")
self.gridLayout.addWidget(self.label_26, 2, 0, 1, 1)
self.comboBox_4 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_4.sizePolicy().hasHeightForWidth())
self.comboBox_4.setSizePolicy(sizePolicy)
self.comboBox_4.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_4.setObjectName("comboBox_4")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.comboBox_4.addItem("")
self.gridLayout.addWidget(self.comboBox_4, 2, 1, 1, 2)
self.label_27 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.label_27.setFont(font)
self.label_27.setObjectName("label_27")
self.gridLayout.addWidget(self.label_27, 3, 0, 1, 1)
self.comboBox_6 = QtWidgets.QComboBox(self.groupBox)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_6.sizePolicy().hasHeightForWidth())
self.comboBox_6.setSizePolicy(sizePolicy)
self.comboBox_6.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_6.setObjectName("comboBox_6")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.comboBox_6.addItem("")
self.gridLayout.addWidget(self.comboBox_6, 3, 1, 1, 2)
self.verticalLayout_2.addWidget(self.groupBox)
self.groupBox_5 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_5.setObjectName("groupBox_5")
self.gridLayout_4 = QtWidgets.QGridLayout(self.groupBox_5)
self.gridLayout_4.setObjectName("gridLayout_4")
self.label = QtWidgets.QLabel(self.groupBox_5)
self.label.setObjectName("label")
self.gridLayout_4.addWidget(self.label, 0, 0, 1, 2)
self.spinBox_2 = QtWidgets.QSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_2.sizePolicy().hasHeightForWidth())
self.spinBox_2.setSizePolicy(sizePolicy)
self.spinBox_2.setWrapping(True)
self.spinBox_2.setMinimum(1)
self.spinBox_2.setMaximum(999999999)
self.spinBox_2.setSingleStep(1)
self.spinBox_2.setProperty("value", 2000000)
self.spinBox_2.setObjectName("spinBox_2")
self.gridLayout_4.addWidget(self.spinBox_2, 0, 2, 1, 1)
self.label_2 = QtWidgets.QLabel(self.groupBox_5)
self.label_2.setObjectName("label_2")
self.gridLayout_4.addWidget(self.label_2, 0, 3, 1, 1)
self.spinBox_6 = QtWidgets.QSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_6.sizePolicy().hasHeightForWidth())
self.spinBox_6.setSizePolicy(sizePolicy)
self.spinBox_6.setMinimum(1)
self.spinBox_6.setMaximum(99999999)
self.spinBox_6.setProperty("value", 100)
self.spinBox_6.setObjectName("spinBox_6")
self.gridLayout_4.addWidget(self.spinBox_6, 0, 5, 1, 1)
self.label_3 = QtWidgets.QLabel(self.groupBox_5)
self.label_3.setObjectName("label_3")
self.gridLayout_4.addWidget(self.label_3, 1, 0, 1, 2)
self.spinBox_7 = QtWidgets.QSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_7.sizePolicy().hasHeightForWidth())
self.spinBox_7.setSizePolicy(sizePolicy)
self.spinBox_7.setWrapping(True)
self.spinBox_7.setMinimum(1)
self.spinBox_7.setMaximum(9999)
self.spinBox_7.setSingleStep(1)
self.spinBox_7.setProperty("value", 2)
self.spinBox_7.setObjectName("spinBox_7")
self.gridLayout_4.addWidget(self.spinBox_7, 1, 2, 1, 1)
self.label_4 = QtWidgets.QLabel(self.groupBox_5)
self.label_4.setObjectName("label_4")
self.gridLayout_4.addWidget(self.label_4, 1, 3, 1, 2)
self.spinBox_8 = QtWidgets.QSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_8.sizePolicy().hasHeightForWidth())
self.spinBox_8.setSizePolicy(sizePolicy)
self.spinBox_8.setWrapping(True)
self.spinBox_8.setMinimum(1)
self.spinBox_8.setMaximum(9999)
self.spinBox_8.setSingleStep(1)
self.spinBox_8.setProperty("value", 4)
self.spinBox_8.setObjectName("spinBox_8")
self.gridLayout_4.addWidget(self.spinBox_8, 1, 5, 1, 1)
self.checkBox = QtWidgets.QCheckBox(self.groupBox_5)
self.checkBox.setChecked(True)
self.checkBox.setObjectName("checkBox")
self.buttonGroup = QtWidgets.QButtonGroup(MrBayes)
self.buttonGroup.setObjectName("buttonGroup")
self.buttonGroup.addButton(self.checkBox)
self.gridLayout_4.addWidget(self.checkBox, 2, 0, 1, 2)
self.doubleSpinBox_2 = QtWidgets.QDoubleSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.doubleSpinBox_2.sizePolicy().hasHeightForWidth())
self.doubleSpinBox_2.setSizePolicy(sizePolicy)
self.doubleSpinBox_2.setMaximum(1.0)
self.doubleSpinBox_2.setSingleStep(0.01)
self.doubleSpinBox_2.setProperty("value", 0.25)
self.doubleSpinBox_2.setObjectName("doubleSpinBox_2")
self.gridLayout_4.addWidget(self.doubleSpinBox_2, 2, 2, 1, 1)
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox_5)
self.checkBox_2.setObjectName("checkBox_2")
self.buttonGroup.addButton(self.checkBox_2)
self.gridLayout_4.addWidget(self.checkBox_2, 2, 3, 1, 1)
self.spinBox_10 = QtWidgets.QSpinBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.spinBox_10.sizePolicy().hasHeightForWidth())
self.spinBox_10.setSizePolicy(sizePolicy)
self.spinBox_10.setWrapping(True)
self.spinBox_10.setMinimum(1)
self.spinBox_10.setMaximum(999999999)
self.spinBox_10.setSingleStep(1)
self.spinBox_10.setProperty("value", 250)
self.spinBox_10.setObjectName("spinBox_10")
self.gridLayout_4.addWidget(self.spinBox_10, 2, 5, 1, 1)
self.label_6 = QtWidgets.QLabel(self.groupBox_5)
self.label_6.setObjectName("label_6")
self.gridLayout_4.addWidget(self.label_6, 3, 0, 1, 1)
self.label_7 = QtWidgets.QLabel(self.groupBox_5)
self.label_7.setObjectName("label_7")
self.gridLayout_4.addWidget(self.label_7, 3, 3, 1, 1)
self.comboBox_8 = QtWidgets.QComboBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_8.sizePolicy().hasHeightForWidth())
self.comboBox_8.setSizePolicy(sizePolicy)
self.comboBox_8.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_8.setObjectName("comboBox_8")
self.comboBox_8.addItem("")
self.comboBox_8.addItem("")
self.gridLayout_4.addWidget(self.comboBox_8, 3, 2, 1, 1)
self.comboBox_9 = QtWidgets.QComboBox(self.groupBox_5)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.comboBox_9.sizePolicy().hasHeightForWidth())
self.comboBox_9.setSizePolicy(sizePolicy)
self.comboBox_9.setMinimumSize(QtCore.QSize(13, 26))
self.comboBox_9.setObjectName("comboBox_9")
self.comboBox_9.addItem("")
self.comboBox_9.addItem("")
self.gridLayout_4.addWidget(self.comboBox_9, 3, 5, 1, 1)
self.verticalLayout_2.addWidget(self.groupBox_5)
self.groupBox_3 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_3.setObjectName("groupBox_3")
self.gridLayout_3 = QtWidgets.QGridLayout(self.groupBox_3)
self.gridLayout_3.setObjectName("gridLayout_3")
self.pushButton = ArrowPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton.sizePolicy().hasHeightForWidth())
self.pushButton.setSizePolicy(sizePolicy)
self.pushButton.setLayoutDirection(QtCore.Qt.LeftToRight)
self.pushButton.setAutoFillBackground(False)
icon1 = QtGui.QIcon()
icon1.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_start_60207.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton.setIcon(icon1)
self.pushButton.setAutoExclusive(False)
self.pushButton.setObjectName("pushButton")
self.gridLayout_3.addWidget(self.pushButton, 0, 0, 1, 1)
self.pushButton_continue = QtWidgets.QPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_continue.sizePolicy().hasHeightForWidth())
self.pushButton_continue.setSizePolicy(sizePolicy)
self.pushButton_continue.setLayoutDirection(QtCore.Qt.LeftToRight)
self.pushButton_continue.setAutoFillBackground(False)
icon2 = QtGui.QIcon()
icon2.addPixmap(
QtGui.QPixmap(
":/picture/resourses/Play-pause_button_play_stop_blue_pause.png"
), QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_continue.setIcon(icon2)
self.pushButton_continue.setAutoExclusive(False)
self.pushButton_continue.setObjectName("pushButton_continue")
self.gridLayout_3.addWidget(self.pushButton_continue, 0, 1, 1, 1)
self.pushButton_10 = QtWidgets.QPushButton(self.groupBox_3)
icon3 = QtGui.QIcon()
icon3.addPixmap(
QtGui.QPixmap(":/picture/resourses/Eye_Care_Services-512.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_10.setIcon(icon3)
self.pushButton_10.setObjectName("pushButton_10")
self.gridLayout_3.addWidget(self.pushButton_10, 1, 0, 1, 1)
self.pushButton_2 = ArrowPushButton(self.groupBox_3)
sizePolicy = QtWidgets.QSizePolicy(QtWidgets.QSizePolicy.Expanding,
QtWidgets.QSizePolicy.Fixed)
sizePolicy.setHorizontalStretch(0)
sizePolicy.setVerticalStretch(0)
sizePolicy.setHeightForWidth(
self.pushButton_2.sizePolicy().hasHeightForWidth())
self.pushButton_2.setSizePolicy(sizePolicy)
icon4 = QtGui.QIcon()
icon4.addPixmap(
QtGui.QPixmap(":/picture/resourses/if_Delete_1493279.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
self.pushButton_2.setIcon(icon4)
self.pushButton_2.setObjectName("pushButton_2")
self.gridLayout_3.addWidget(self.pushButton_2, 1, 1, 1, 1)
self.verticalLayout_2.addWidget(self.groupBox_3)
self.groupBox_6 = QtWidgets.QGroupBox(self.scrollAreaWidgetContents)
self.groupBox_6.setObjectName("groupBox_6")
self.verticalLayout = QtWidgets.QVBoxLayout(self.groupBox_6)
self.verticalLayout.setObjectName("verticalLayout")
self.label_8 = QtWidgets.QLabel(self.groupBox_6)
self.label_8.setObjectName("label_8")
self.verticalLayout.addWidget(self.label_8)
self.progressBar = QtWidgets.QProgressBar(self.groupBox_6)
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.verticalLayout.addWidget(self.progressBar)
self.pushButton_9 = QtWidgets.QPushButton(self.groupBox_6)
self.pushButton_9.setIcon(icon3)
self.pushButton_9.setObjectName("pushButton_9")
self.verticalLayout.addWidget(self.pushButton_9)
self.verticalLayout_2.addWidget(self.groupBox_6)
self.scrollArea.setWidget(self.scrollAreaWidgetContents)
self.verticalLayout_3.addWidget(self.scrollArea)
self.retranslateUi(MrBayes)
self.pushButton_partition.toggled['bool'].connect(
self.comboBox_7.setDisabled)
self.checkBox_4.toggled['bool'].connect(self.comboBox_10.setEnabled)
QtCore.QMetaObject.connectSlotsByName(MrBayes)
MrBayes.setTabOrder(self.pushButton_3, self.pushButton_9)
MrBayes.setTabOrder(self.pushButton_9, self.lineEdit)
MrBayes.setTabOrder(self.lineEdit, self.pushButton_2)
MrBayes.setTabOrder(self.pushButton_2, self.pushButton)
def retranslateUi(self, MrBayes):
_translate = QtCore.QCoreApplication.translate
MrBayes.setWindowTitle(_translate("MrBayes", "MrBayes"))
self.groupBox_4.setTitle(_translate("MrBayes", "Input"))
self.label_5.setText(_translate("MrBayes", "Alignment File:"))
self.lineEdit.setPlaceholderText(
_translate("MrBayes", "The file should be NEXUS format"))
self.label_31.setText(_translate("MrBayes", "Outgroup(s):"))
self.label_14.setText(
_translate(
"MrBayes",
"<html><head/><body><p>Click <a href=\"http://mrbayes.sourceforge.net/\"><span style=\" text-decoration: underline; color:#0000ff;\">here</span></a> to learn more about <span style=\" font-weight:600; color:#ff0000;\">MrBayes</span></p></body></html>"
))
self.checkBox_3.setText(_translate("MrBayes", "Save Log"))
self.label_9.setToolTip(_translate("MrBayes", "Brief example"))
self.groupBox.setTitle(_translate("MrBayes", "Parameters"))
self.label_25.setText(_translate("MrBayes", "Models:"))
self.pushButton_partition.setText(
_translate("MrBayes", "Partition Models"))
self.checkBox_4.setText(_translate("MrBayes", "Threads:"))
self.label_28.setText(_translate("MrBayes", "Gamma categories:"))
self.label_26.setText(_translate("MrBayes", "State freq:"))
self.comboBox_4.setItemText(
0, _translate("MrBayes", "dirichlet(1.0,1.0,1.0,1.0)"))
self.comboBox_4.setItemText(1, _translate("MrBayes", "fixed(equal)"))
self.comboBox_4.setItemText(2, _translate("MrBayes",
"fixed(empirical)"))
self.label_27.setToolTip(_translate("MrBayes", "Rate Variation"))
self.label_27.setText(_translate("MrBayes", "Rate Var.:"))
self.comboBox_6.setItemText(
0, _translate("MrBayes", "equal (No rate variation across sites)"))
self.comboBox_6.setItemText(
1, _translate("MrBayes",
"gamma (+G, Gamma-distributed variation)"))
self.comboBox_6.setItemText(
2, _translate("MrBayes",
"lnorm (Log Normal-distributed variation)"))
self.comboBox_6.setItemText(
3,
_translate("MrBayes",
"propinv (+I, Proportion of sites invariable)"))
self.comboBox_6.setItemText(
4,
_translate(
"MrBayes",
"invgamma (+I+G, Proportion invariable, remaining gamma)"))
self.comboBox_6.setItemText(
5, _translate("MrBayes", "adgamma (Autocorrelated variation)"))
self.groupBox_5.setTitle(_translate("MrBayes", "MCMC Settings"))
self.label.setText(_translate("MrBayes", "Generations:"))
self.label_2.setText(_translate("MrBayes", "Sampling Freq:"))
self.label_3.setText(_translate("MrBayes", "Number of Runs:"))
self.label_4.setText(_translate("MrBayes", "Number of Chains:"))
self.checkBox.setText(_translate("MrBayes", "Burnin Fraction:"))
self.checkBox_2.setText(_translate("MrBayes", "Burnin:"))
self.label_6.setToolTip(_translate("MrBayes",
"Type of consensus tree"))
self.label_6.setText(_translate("MrBayes", "Contype:"))
self.label_7.setToolTip(
_translate("MrBayes", "Format of consensus tree"))
self.label_7.setText(_translate("MrBayes", "Conformat:"))
self.comboBox_8.setItemText(0, _translate("MrBayes", "Halfcompat"))
self.comboBox_8.setItemText(1, _translate("MrBayes", "Allcompat"))
self.comboBox_9.setItemText(0, _translate("MrBayes", "Simple"))
self.comboBox_9.setItemText(1, _translate("MrBayes", "Figtree"))
self.groupBox_3.setTitle(_translate("MrBayes", "Run"))
self.pushButton.setText(_translate("MrBayes", "Start"))
self.pushButton_continue.setText(
_translate("MrBayes", "Continue Previous Analysis"))
self.pushButton_10.setText(
_translate("MrBayes", "Show MrBayes Data Block"))
self.pushButton_2.setText(_translate("MrBayes", "Stop"))
self.groupBox_6.setTitle(_translate("MrBayes", "Progress"))
self.label_8.setText(_translate("MrBayes", "Bayesian inference"))
self.pushButton_9.setText(_translate("MrBayes", "Show log"))
