def test_random_lcp_lr_matching(self): T, n, A = 1000, 500, ['a', 'b'] m, TT = 10, 10 for _ in range(T): text = rand.random_word(n, A) sa = suffix_array.skew(text, n) lcp = suffix_array.lcp_kasai(sa, text, n) lcplr = lcp_lr.lcplr_from_lcp(lcp, n) for _ in range(TT): word = rand.random_word(m, A) reference = suffix_array.contains(sa, text, word, n, m) self.assertEqual(list(lcp_lr.contains_with_lcplr( sa, lcplr, text, word, n, m)), list(reference))
def test_lcplr_construction(self): text = "#banana" n = len(text) - 1 sa = suffix_array.skew(text, n) lcp = suffix_array.lcp_kasai(sa, text, n) lcplr = lcp_lr.lcplr_from_lcp(lcp, n) reference = { (1, 2): 1, (2, 3): 3, (1, 3): 1, (3, 4): 0, (4, 5): 0, (5, 6): 2, (4, 6): 0, (3, 6): 0, (1, 6): 0, } self.assertEqual(lcplr, reference, "LCP-LR construction")
def test_lcplr_matching(self): text = "#abrakadabra" n = len(text) - 1 sa = suffix_array.skew(text, n) lcp = suffix_array.lcp_kasai(sa, text, n) lcplr = lcp_lr.lcplr_from_lcp(lcp, n) self.assertEqual(list(lcp_lr.contains_with_lcplr( sa, lcplr, text, "#a", n, 1)), [1,4,6,8,11], "LCP-LR matching") self.assertEqual(list(lcp_lr.contains_with_lcplr( sa, lcplr, text, "#bra", n, 3)), [2,9], "LCP-LR matching") self.assertEqual(list(lcp_lr.contains_with_lcplr( sa, lcplr, text, "#brak", n, 4)), [2], "LCP-LR matching") self.assertEqual(list(lcp_lr.contains_with_lcplr( sa, lcplr, text, "#ra", n, 2)), [3,10], "LCP-LR matching") self.assertEqual(list(lcp_lr.contains_with_lcplr( sa, lcplr, text, "#rak", n, 3)), [3], "LCP-LR matching") self.assertEqual(list(lcp_lr.contains_with_lcplr( sa, lcplr, text, "#l", n, 1)), [], "LCP-LR matching") self.assertEqual(list(lcp_lr.contains_with_lcplr( sa, lcplr, text, "#x", n, 1)), [], "LCP-LR matching") self.assertEqual(list(lcp_lr.contains_with_lcplr( sa, lcplr, text, "#xyz", n, 3)), [], "LCP-LR matching")