def get_parser(self, prog_name):
parser = super(FilesCopy, self).get_parser(prog_name)
parser = AgaveURI.extend_parser(self, parser)
parser.add_argument('destination',
metavar='<destination>',
help='Destination path')
return parser
def take_action(self, parsed_args):
parsed_args = FilesPemsFormatMany.preprocess_args(self, parsed_args)
headers = Permission.get_headers(self, self.VERBOSITY,
parsed_args.formatter)
self.update_payload(parsed_args)
(storage_system, file_path) = AgaveURI.parse_url(parsed_args.agave_uri)
results = pems_list(file_path,
system_id=storage_system,
limit=parsed_args.limit,
offset=parsed_args.offset,
permissive=False,
agave=self.tapis_client)
records = []
for rec in results:
record = []
# Table display
if self.app_verbose_level > self.VERBOSITY:
record.append(rec.get('username'))
record.extend(Permission.pem_to_row(rec.get('permission', {})))
else:
for key in headers:
val = self.render_value(rec.get(key, None))
record.append(val)
# Deal with an API-side bug where >1 identical pems are
# returned for the owning user when no additional pems have been
# granted on the app
if record not in records:
records.append(record)
return (tuple(headers), tuple(records))
def take_action(self, parsed_args):
parsed_args = self.preprocess_args(parsed_args)
self.requests_client.setup(API_NAME, SERVICE_VERSION)
self.update_payload(parsed_args)
(storage_system, file_path) = AgaveURI.parse_url(parsed_args.agave_uri)
dir_name = parsed_args.dir_name
if dir_name is None:
dir_name = ''
headers = self.render_headers(FileStaging, parsed_args)
rec = makedirs(dir_name,
system_id=storage_system,
destination=file_path,
exist_ok=True,
permissive=False,
agave=self.tapis_client)
# Fixes issue where the name of the listed file/directory is not
# returned by the files service
if rec['name'] == '.':
rec['name'] = os.path.basename(rec['path'])
# Coerce path to absolute path
rec['path'] = abspath(rec['path'], '/')
data = []
for key in headers:
try:
val = rec[key]
except KeyError:
val = None
data.append(self.render_value(val))
return (tuple(headers), tuple(data))
def get_parser(self, prog_name):
parser = super(FilesMakeDir, self).get_parser(prog_name)
parser = AgaveURI.extend_parser(self, parser)
parser.add_argument(
'dir_name',
metavar='DIRECTORY',
help='Name of the new directory (relative to <agave_uri>)')
return parser
def get_parser(self, prog_name):
parser = super(FilesPemsGrant, self).get_parser(prog_name)
parser = AgaveURI.extend_parser(self, parser)
parser = Username.extend_parser(self, parser)
parser.add_argument('permission',
metavar='<permission>',
choices=Permission.NAMES,
help='Permission string ({0})'.format('| '.join(
Permission.NAMES)))
return parser
def get_parser(self, prog_name):
parser = super(FilesDownload, self).get_parser(prog_name)
parser = AgaveURI.extend_parser(self, parser)
parser = IncludeFiles.extend_parser(self, parser)
parser = ExcludeFiles.extend_parser(self, parser)
parser = DownloadDirectoryArg.extend_parser(self, parser)
parser = OverwritePolicy.extend_parser(self, parser)
parser = ReportProgress.extend_parser(self, parser)
# Other options might include:
# --parallel : whether to attempt parallel downloads
# --retries : max retries before error
# --timeout : max elapsed time before error
# --destination : explicitly specify download destination
return parser
def get_parser(self, prog_name):
parser = super(FilesUpload, self).get_parser(prog_name)
# Positionals:
#
# CLI expects <agave_uri> <file_path> so the user can up-arrow
# in the terminal to change the uploaded file path
parser = AgaveURI.extend_parser(self, parser)
parser = LocalFilePath.extend_parser(self, parser)
# Arguments:
#
# parser = IncludeFiles.extend_parser(self, parser)
parser = ExcludeFiles.extend_parser(self, parser)
parser = OverwritePolicy.extend_parser(self, parser)
parser = FilesCallbackURI.extend_parser(self, parser)
parser = ReportProgress.extend_parser(self, parser)
# --sync : wait for all files to complete staging
return parser
def get_parser(self, prog_name):
parser = FilesPemsFormatMany.get_parser(self, prog_name)
parser = AgaveURI.extend_parser(self, parser)
parser = FileOptions.extend_parser(self, parser)
return parser
def get_parser(self, prog_name):
parser = super(FilesPemsDrop, self).get_parser(prog_name)
parser = AgaveURI.extend_parser(self, parser)
return parser
def get_parser(self, prog_name):
parser = super(FilesDelete, self).get_parser(prog_name)
parser = AgaveURI.extend_parser(self, parser)
parser = FileOptions.extend_parser(self, parser)
parser = ReportProgress.extend_parser(self, parser)
return parser
def get_parser(self, prog_name):
parser = super(FilesPemsRevoke, self).get_parser(prog_name)
parser = AgaveURI.extend_parser(self, parser)
parser = Username.extend_parser(self, parser)
return parser
def get_parser(self, prog_name):
parser = super(FilesShow, self).get_parser(prog_name)
parser = AgaveURI.extend_parser(self, parser)
parser = FileOptions.extend_parser(self, parser)
return parser