def test_hi():
from turing.nvidia_modelingpreln import BertConfig as BertConfigPreLN
from turing.nvidia_modelingpreln import BertForQuestionAnswering as BertForQuestionAnsweringPreLN
from turing.nvidia_modelingpreln import BertLayer
bert_model_config = {
"vocab_size_or_config_json_file": 119547,
"hidden_size": 1024,
"num_hidden_layers": 1,
"num_attention_heads": 16,
"intermediate_size": 4096,
"hidden_act": "gelu",
"hidden_dropout_prob": 0.1,
"attention_probs_dropout_prob": 0.1,
"hidden_dropout_prob": 0.1,
"attention_probs_dropout_prob": 0.1,
"max_position_embeddings": 512,
"type_vocab_size": 2,
"initializer_range": 0.02
}
bert_config = BertConfigPreLN(**bert_model_config)
base_model = BertForQuestionAnsweringPreLN(bert_config, args=None)
#base_model = LinearStack()
test_model = copy.deepcopy(base_model)
test_model = module_inject(BertLayer, test_model, bert_config, 4, 384,
1234)
print('BASE', base_model)
print('TEST', test_model)
def main():
parser = get_argument_parser()
# Include DeepSpeed configuration arguments
parser = deepspeed.add_config_arguments(parser)
args = parser.parse_args()
if args.local_rank == -1 or args.no_cuda:
device = torch.device("cuda" if torch.cuda.is_available()
and not args.no_cuda else "cpu")
n_gpu = torch.cuda.device_count()
else:
torch.cuda.set_device(args.local_rank)
device = torch.device("cuda", args.local_rank)
n_gpu = 1
# Initializes the distributed backend which will take care of sychronizing nodes/GPUs
torch.distributed.init_process_group(backend='nccl')
logger.info(
"device: {} n_gpu: {}, distributed training: {}, 16-bits training: {}".
format(device, n_gpu, bool(args.local_rank != -1), args.fp16))
if args.gradient_accumulation_steps < 1:
raise ValueError(
"Invalid gradient_accumulation_steps parameter: {}, should be >= 1"
.format(args.gradient_accumulation_steps))
args.train_batch_size = int(args.train_batch_size /
args.gradient_accumulation_steps)
random.seed(args.seed)
np.random.seed(args.seed)
torch.manual_seed(args.seed)
if n_gpu > 0:
torch.cuda.manual_seed_all(args.seed)
if not args.do_train and not args.do_predict:
raise ValueError(
"At least one of `do_train` or `do_predict` must be True.")
if args.do_train:
if not args.train_file:
raise ValueError(
"If `do_train` is True, then `train_file` must be specified.")
if args.do_predict:
if not args.predict_file:
raise ValueError(
"If `do_predict` is True, then `predict_file` must be specified."
)
if os.path.exists(args.output_dir) and os.listdir(
args.output_dir) and args.do_train:
raise ValueError(
"Output directory () already exists and is not empty.")
os.makedirs(args.output_dir, exist_ok=True)
# Prepare Summary writer
if torch.distributed.get_rank() == 0 and args.job_name is not None:
args.summary_writer = get_summary_writer(name=args.job_name,
base=args.output_dir)
else:
args.summary_writer = None
tokenizer = BertTokenizer.from_pretrained(args.bert_model,
do_lower_case=args.do_lower_case)
train_examples = None
num_train_steps = None
if args.do_train:
train_examples = read_squad_examples(input_file=args.train_file,
is_training=True)
num_train_steps = int(
len(train_examples) / args.train_batch_size /
args.gradient_accumulation_steps * args.num_train_epochs)
# Prepare model
# model = BertForQuestionAnswering.from_pretrained(args.bert_model,
# cache_dir=PYTORCH_PRETRAINED_BERT_CACHE / 'distributed_{}'.format(args.local_rank))
# Support for word embedding padding checkpoints
# Prepare model
bert_model_config = {
"vocab_size_or_config_json_file": 119547,
"hidden_size": 1024,
"num_hidden_layers": 24,
"num_attention_heads": 16,
"intermediate_size": 4096,
"hidden_act": "gelu",
"hidden_dropout_prob": args.dropout,
"attention_probs_dropout_prob": args.dropout,
"hidden_dropout_prob": 0.1,
"attention_probs_dropout_prob": 0.1,
"max_position_embeddings": 512,
"type_vocab_size": 2,
"initializer_range": 0.02
}
if args.preln:
bert_config = BertConfigPreLN(**bert_model_config)
else:
bert_config = BertConfig(**bert_model_config)
bert_config.vocab_size = len(tokenizer.vocab)
# Padding for divisibility by 8
if bert_config.vocab_size % 8 != 0:
bert_config.vocab_size += 8 - (bert_config.vocab_size % 8)
if args.preln:
model = BertForQuestionAnsweringPreLN(bert_config, args)
else:
model = BertForQuestionAnswering(bert_config, args)
print("VOCAB SIZE:", bert_config.vocab_size)
if args.model_file is not "0":
logger.info(f"Loading Pretrained Bert Encoder from: {args.model_file}")
checkpoint_state_dict = torch.load(args.model_file,
map_location=torch.device("cpu"))
if 'module' in checkpoint_state_dict:
logger.info('Loading DeepSpeed v2.0 style checkpoint')
model.load_state_dict(checkpoint_state_dict['module'],
strict=False)
elif 'model_state_dict' in checkpoint_state_dict:
model.load_state_dict(checkpoint_state_dict['model_state_dict'],
strict=False)
else:
raise ValueError("Unable to find model state in checkpoint")
#bert_state_dict = torch.load(args.model_file)
#model.bert.load_state_dict(bert_state_dict, strict=False)
logger.info(f"Pretrained Bert Encoder Loaded from: {args.model_file}")
# Prepare optimizer
param_optimizer = list(model.named_parameters())
# hack to remove pooler, which is not used
# thus it produce None grad that break apex
param_optimizer = [n for n in param_optimizer if 'pooler' not in n[0]]
no_decay = ['bias', 'LayerNorm.bias', 'LayerNorm.weight']
optimizer_grouped_parameters = [{
'params':
[p for n, p in param_optimizer if not any(nd in n for nd in no_decay)],
'weight_decay':
0.01
}, {
'params':
[p for n, p in param_optimizer if any(nd in n for nd in no_decay)],
'weight_decay':
0.0
}]
model, optimizer, _, _ = deepspeed.initialize(
args=args,
model=model,
model_parameters=optimizer_grouped_parameters,
dist_init_required=False)
logger.info("propagate deepspeed-config settings to client settings")
args.train_batch_size = model.train_micro_batch_size_per_gpu()
args.gradient_accumulation_steps = model.gradient_accumulation_steps()
args.fp16 = model.fp16_enabled()
args.print_steps = model.steps_per_print()
args.learning_rate = model.get_lr()[0]
args.wall_clock_breakdown = model.wall_clock_breakdown()
t_total = num_train_steps
if args.local_rank != -1:
t_total = t_total // torch.distributed.get_world_size()
global_step = 0
if args.do_train:
cached_train_features_file = args.train_file + '_{0}_{1}_{2}_{3}'.format(
list(filter(None, args.bert_model.split('/'))).pop(),
str(args.max_seq_length), str(args.doc_stride),
str(args.max_query_length))
train_features = None
try:
with open(cached_train_features_file, "rb") as reader:
train_features = pickle.load(reader)
except:
train_features = convert_examples_to_features(
examples=train_examples,
tokenizer=tokenizer,
max_seq_length=args.max_seq_length,
doc_stride=args.doc_stride,
max_query_length=args.max_query_length,
is_training=True)
if args.local_rank == -1 or torch.distributed.get_rank() == 0:
logger.info(" Saving train features into cached file %s",
cached_train_features_file)
with open(cached_train_features_file, "wb") as writer:
pickle.dump(train_features, writer)
logger.info("***** Running training *****")
logger.info(" Num orig examples = %d", len(train_examples))
logger.info(" Num split examples = %d", len(train_features))
logger.info(" Batch size = %d", args.train_batch_size)
logger.info(" Num steps = %d", num_train_steps)
all_input_ids = torch.tensor([f.input_ids for f in train_features],
dtype=torch.long)
all_input_mask = torch.tensor([f.input_mask for f in train_features],
dtype=torch.long)
all_segment_ids = torch.tensor([f.segment_ids for f in train_features],
dtype=torch.long)
all_start_positions = torch.tensor(
[f.start_position for f in train_features], dtype=torch.long)
all_end_positions = torch.tensor(
[f.end_position for f in train_features], dtype=torch.long)
train_data = TensorDataset(all_input_ids, all_input_mask,
all_segment_ids, all_start_positions,
all_end_positions)
if args.local_rank == -1:
train_sampler = RandomSampler(train_data)
else:
train_sampler = DistributedSampler(train_data)
train_dataloader = DataLoader(train_data,
sampler=train_sampler,
batch_size=args.train_batch_size)
model.train()
ema_loss = 0.
sample_count = 0
num_epoch = 0
for _ in trange(int(args.num_train_epochs), desc="Epoch"):
num_epoch += 1
epoch_step = 0
for step, batch in enumerate(
tqdm(train_dataloader, desc="Iteration", smoothing=0)):
if n_gpu == 1:
batch = tuple(
t.to(device)
for t in batch) # multi-gpu does scattering it-self
input_ids, input_mask, segment_ids, start_positions, end_positions = batch
loss = model(input_ids, segment_ids, input_mask,
start_positions, end_positions)
if n_gpu > 1:
loss = loss.mean() # mean() to average on multi-gpu.
if args.gradient_accumulation_steps > 1:
loss = loss / args.gradient_accumulation_steps
ema_loss = args.loss_plot_alpha * ema_loss + (
1 - args.loss_plot_alpha) * loss.item()
model.backward(loss)
sample_count += (args.train_batch_size *
torch.distributed.get_world_size())
if (step + 1) % args.gradient_accumulation_steps == 0:
# modify learning rate with special warm up BERT uses
lr_this_step = args.learning_rate * warmup_linear(
global_step / t_total, args.warmup_proportion)
for param_group in optimizer.param_groups:
param_group['lr'] = lr_this_step
model.step()
global_step += 1
epoch_step += 1
if torch.distributed.get_rank(
) == 0 and args.summary_writer:
summary_events = [
(f'Train/Steps/lr', lr_this_step, global_step),
(f'Train/Samples/train_loss', loss.item(),
sample_count),
(f'Train/Samples/lr', lr_this_step, sample_count),
(f'Train/Samples/train_ema_loss', ema_loss,
sample_count)
]
if args.fp16 and hasattr(optimizer, 'cur_scale'):
summary_events.append(
(f'Train/Samples/scale', optimizer.cur_scale,
sample_count))
write_summary_events(args.summary_writer,
summary_events)
args.summary_writer.flush()
if torch.distributed.get_rank() == 0 and (
step + 1) % args.print_steps == 0:
logger.info(
f"bert_squad_progress: step={global_step} lr={lr_this_step} loss={ema_loss}"
)
else:
model.step()
if is_time_to_exit(args=args,
epoch_steps=epoch_step,
global_steps=global_step):
logger.info(
f'Warning: Early epoch termination due to max steps limit, epoch step ={epoch_step}, global step = {global_step}, epoch = {num_epoch}'
)
break
# Save a trained model
# model_to_save = model.module if hasattr(model, 'module') else model # Only save the model it-self
#output_model_file = os.path.join(args.output_dir, "pytorch_model.bin")
# if args.do_train:
# torch.save(model_to_save.state_dict(), output_model_file)
# Load a trained model that you have fine-tuned
#model_state_dict = torch.load(output_model_file)
#model = BertForQuestionAnswering.from_pretrained(args.bert_model, state_dict=model_state_dict)
# model.to(device)
if args.do_predict and (args.local_rank == -1
or torch.distributed.get_rank() == 0):
eval_examples = read_squad_examples(input_file=args.predict_file,
is_training=False)
eval_features = convert_examples_to_features(
examples=eval_examples,
tokenizer=tokenizer,
max_seq_length=args.max_seq_length,
doc_stride=args.doc_stride,
max_query_length=args.max_query_length,
is_training=False)
logger.info("***** Running predictions *****")
logger.info(" Num orig examples = %d", len(eval_examples))
logger.info(" Num split examples = %d", len(eval_features))
logger.info(" Batch size = %d", args.predict_batch_size)
all_input_ids = torch.tensor([f.input_ids for f in eval_features],
dtype=torch.long)
all_input_mask = torch.tensor([f.input_mask for f in eval_features],
dtype=torch.long)
all_segment_ids = torch.tensor([f.segment_ids for f in eval_features],
dtype=torch.long)
all_example_index = torch.arange(all_input_ids.size(0),
dtype=torch.long)
eval_data = TensorDataset(all_input_ids, all_input_mask,
all_segment_ids, all_example_index)
# Run prediction for full data
eval_sampler = SequentialSampler(eval_data)
eval_dataloader = DataLoader(eval_data,
sampler=eval_sampler,
batch_size=args.predict_batch_size)
model.eval()
all_results = []
logger.info("Start evaluating")
for input_ids, input_mask, segment_ids, example_indices in tqdm(
eval_dataloader, desc="Evaluating"):
if len(all_results) % 1000 == 0:
logger.info("Processing example: %d" % (len(all_results)))
input_ids = input_ids.to(device)
input_mask = input_mask.to(device)
segment_ids = segment_ids.to(device)
with torch.no_grad():
batch_start_logits, batch_end_logits = model(
input_ids, segment_ids, input_mask)
for i, example_index in enumerate(example_indices):
start_logits = batch_start_logits[i].detach().cpu().tolist()
end_logits = batch_end_logits[i].detach().cpu().tolist()
eval_feature = eval_features[example_index.item()]
unique_id = int(eval_feature.unique_id)
all_results.append(
RawResult(unique_id=unique_id,
start_logits=start_logits,
end_logits=end_logits))
output_prediction_file = os.path.join(args.output_dir,
"predictions.json")
output_nbest_file = os.path.join(args.output_dir,
"nbest_predictions.json")
write_predictions(eval_examples, eval_features, all_results,
args.n_best_size, args.max_answer_length,
args.do_lower_case, output_prediction_file,
output_nbest_file, args.verbose_logging)