def get_template(t):
"""Find template file *t* and return its real path.
*t* can be a single string or a list of strings. A string
should be one of
1. a relative or absolute path,
2. a file in one of the directories listed in :data:`bornprofiler.config.path`,
3. a filename in the package template directory (defined in the template dictionary
:data:`bornprofiler.config.templates`) or
4. a key into :data:`~bornprofiler.config.templates`.
The first match (in this order) is returned. If the argument is a
single string then a single string is returned, otherwise a list
of strings.
:Arguments: *t* : template file or key (string or list of strings)
:Returns: os.path.realpath(*t*) (or a list thereof)
:Raises: :exc:`ValueError` if no file can be located.
"""
templates = [_get_template(s) for s in utilities.asiterable(t)]
if len(templates) == 1:
return templates[0]
return templates
def get_template(t):
"""Find template file *t* and return its real path.
*t* can be a single string or a list of strings. A string
should be one of
1. a relative or absolute path,
2. a file in one of the directories listed in :data:`gromacs.config.path`,
3. a filename in the package template directory (defined in the template dictionary
:data:`gromacs.config.templates`) or
4. a key into :data:`~gromacs.config.templates`.
The first match (in this order) is returned. If the argument is a
single string then a single string is returned, otherwise a list
of strings.
:Arguments: *t* : template file or key (string or list of strings)
:Returns: os.path.realpath(*t*) (or a list thereof)
:Raises: :exc:`ValueError` if no file can be located.
"""
templates = [_get_template(s) for s in utilities.asiterable(t)]
if len(templates) == 1:
return templates[0]
return templates
def _process_window_numbers(self, windows=None):
"""Window numbers are 0-based."""
if windows is None:
windows = numpy.arange(self.numPoints)
else:
windows = numpy.unique(asiterable(windows))
if windows.min() < 0 or windows.max() >= self.numPoints:
errmsg = "window numbers must be between 0 and %d inclusive." % (
self.numPoints - 1)
logger.fatal(errmsg)
raise ValueError(errmsg)
return windows
def get_templates(t):
"""Find template file(s) *t* and return their real paths.
*t* can be a single string or a list of strings. A string should
be one of
1. a relative or absolute path,
2. a file in one of the directories listed in :data:`bornprofiler.config.path`,
3. a filename in the package template directory (defined in the template dictionary
:data:`bornprofiler.config.templates`) or
4. a key into :data:`~bornprofiler.config.templates`.
The first match (in this order) is returned for each input argument.
:Arguments: *t* : template file or key (string or list of strings)
:Returns: list of os.path.realpath(*t*)
:Raises: :exc:`ValueError` if no file can be located.
"""
return [_get_template(s) for s in utilities.asiterable(t)]
def get_templates(t):
"""Find template file(s) *t* and return their real paths.
*t* can be a single string or a list of strings. A string should
be one of
1. a relative or absolute path,
2. a file in one of the directories listed in :data:`gromacs.config.path`,
3. a filename in the package template directory (defined in the template dictionary
:data:`gromacs.config.templates`) or
4. a key into :data:`~gromacs.config.templates`.
The first match (in this order) is returned for each input argument.
:Arguments: *t* : template file or key (string or list of strings)
:Returns: list of os.path.realpath(*t*)
:Raises: :exc:`ValueError` if no file can be located.
"""
return [_get_template(s) for s in utilities.asiterable(t)]