def test_factory():
# Generate the network & experiment.
# This should generally be done in a separate script
network = pyphi.examples.basic_network()
state = (1, 0, 0)
experiment = Experiment('test_factory', '1.0', network, state)
experiment.initialize()
port = 10030
mechanisms = pyphi.utils.powerset(network.node_indices, nonempty=True)
with WorkerFactory(experiment) as factory:
start_master(experiment, mechanisms, port)
# Load CES
ces = experiment.load_ces()
print(ces)
# Check results
reference_ces = pyphi.compute.ces(pyphi.Subsystem(network, state))
assert ces.phis == reference_ces.phis
assert ces.mechanisms == reference_ces.mechanisms
print('All good!')
def test_simple():
network = pyphi.examples.basic_network()
state = (1, 0, 0)
experiment = Experiment('test_simple', '1.0', network, state)
experiment.initialize()
mechanisms = pyphi.utils.powerset(network.node_indices, nonempty=True)
print('Starting worker...')
worker = subprocess.Popen([
'work_queue_worker',
'-N',
experiment.project_name,
'-P',
experiment.password_file,
# '-d', 'all'
])
try:
print('Starting master...')
start_master(experiment,
mechanisms,
port=10021,
timeout=0,
n_divisions=2)
except:
raise
finally:
print('Killing worker...')
worker.kill()
worker.wait()
print('Done.')
ces = experiment.load_ces()
print(ces)
reference_ces = pyphi.compute.ces(pyphi.Subsystem(network, state))
assert ces.phis == reference_ces.phis
assert ces.mechanisms == reference_ces.mechanisms
print('All good!')
#print(inpt,'\n',sw,'\n',swN, '\n''------''\n')
V = 0
for v in range(0, nN):
V = V + istate[v] * 2**v
tpm[int(V)] = tuple(swN)
# Create the connectivity matrix
cm = np.abs(np.where(weights != 0, 1, 0))
# Transpose our (receiving, sending) CM to use the PyPhi convention of (sending, recieving)
cm = np.transpose(cm)
# Create the network
subsystem_labels = ('A', 'B', 'C', 'D', 'E', 'F', 'G', 'H', 'I', 'J', 'K',
'L', 'M', 'N', 'O', 'P', 'Q', 'R', 'S', 'T')
network = pyphi.Network(tpm, cm, subsystem_labels)
# In[5]:
# Set state and create subsystem
#A B C D E F G H I J K L M N O P Q R S T#
state = (0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0)
subsystem = pyphi.Subsystem(network, state, range(network.size))
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T = subsystem.node_indices
pyphi.config.REPR_VERBOSITY = 1
experiment = Experiment('largepyr', '2.1', network, state)
experiment.initialize()