def do_something(self):
num, den = 0, 0
try: num / den
except: self.exception('Division by 0 failed !\n%s', self.exception_trace())
self.info('The function emitting this message is: %s', self.func_name())
self.info('The stack trace of the function emitting this message is:\n%s', self.stack_trace())
t = create_time(['1900-01-01 00:00:00', '9999-12-31 23:59:59'])
y = create_lat(range(-90, 90))
x = create_lon(range(-180, 180))
v = cdms2.createVariable(numpy.random.ranf((len(t), len(y), len(x))), axes=[t, y, x], id='data', long_name='random data')
self.info('Time:\n%s', self.describe(t))
self.info('Latitude:\n%s', self.describe(y))
self.info('Longitude:\n%s', self.describe(x, stats=True))
self.info('Variable:\n%s', self.describe(v, stats=True))
yo = cdms2.createAxis(lai)
LONGITUDE = create_lon(loi,
id='longitude',
attributes=dict(
long_name='Longitude of each location',
standard_name='longitude',
units='degrees_east',
valid_min='-180.',
valid_max='180.',
axis='X'))
LATITUDE = create_lat(lai,
id='latitude',
attributes=dict(
long_name='Latitude of each location',
standard_name='latitude',
units='degrees_north',
valid_min='-90.',
valid_max='90.',
axis='Y'))
z = U.getLevel()
DEPTH = create_dep(z,
attributes=dict(long_name='sea water depth',
standard_name='depth',
units='m',
valid_min='0.',
valid_max='12000.'))
#axes = [TIME,DEPTH,LATITUDE,LONGITUDE]
axes = [DEPTH, LATITUDE, LONGITUDE]
latname=options.latname, imargin=2, jmargin=2, maxvalue=None,
reverse=options.reverse)
# Interpolate on section
bathy = b.bathy()
lons, lats, xx, yy = transect_specs(bathy.getGrid(),
options.x0, options.y0, options.x1, options.y1, getxy=True)
tbathy = grid2xy(bathy, lons, lats)
if not isinstance(options.along, basestring) or options.along not in ['lon', 'lat', 'm', 'km', 'dist', 'auto']:
options.along = 'auto'
if options.along=='auto':
options.along = 'lon' if xx.max()-xx.min() > yy.max()-yy.min() else 'lat'
if options.along=='lon':
taxis = create_lon(lons)
elif options.along=='lat':
taxis = create_lat(lats)
else:
xy = N.sqrt((xx-xx[0])**2+(yy-yy[0])**2)
if xy.max()-xy.min()>2500 or options.along=='km':
units = 'km'
xy *= 1e-3
else:
units = 'm'
taxis = cdms2.createAxis(xy)
taxis.units = units
taxis.long_name = 'Distance'
tbathy.setAxis(0, taxis)
# Plot
c = curve2(tbathy, 'k', bgcolor=(.95, .95, 1), order='d-',
show=False, yfmt='%gm', yunits=False, bottom=0.12, zorder=10,
# Grid (15x15)
nx, ny = 15, 10
import numpy as N
from vacumm.misc.axes import create_lon, create_lat
lon = create_lon(N.linspace(-5.2, -4.4, nx))
lat = create_lat(N.linspace(48, 48.6, ny))
# Plot params
import pylab as P
import vacumm.misc.color as C
P.figure(figsize=(6, 5))
P.subplots_adjust(top=.92, left=.03, bottom=.03, wspace=.05, hspace=.2)
kwplot = dict(colorbar=False,cmap=C.cmap_linear([(.6, .8, 1), C.land]), \
contour=False,show=False,fillcontinents=False,fill='pcolor',
drawmeridians=False, drawparallels=False, res='h', key=True, xymasked=False)
# Mask using shoreline
from vacumm.misc.grid.masking import polygon_mask
from vacumm.misc.plot import map2
import MV2 as MV
# - mask if central point sur terre (mode = 0 = 'inside')
lon2, lat2 = N.meshgrid(lon, lat)
mask0 = polygon_mask((lon2, lat2), 'h', mode=0, ocean=False)
mask0 = MV.array(mask0, axes=[lat, lon])
mask0.long_name = "'inside'"
map2(mask0, subplot=221, **kwplot)
# - mask if cell more than 50% of land (mode = 1 = 'intersect')
thresholds = .5
mask1 = polygon_mask((lon2, lat2),
'h',
mode=1,
options.y0,
options.x1,
options.y1,
getxy=True)
tbathy = grid2xy(bathy, lons, lats)
if not isinstance(options.along, basestring) or options.along not in [
'lon', 'lat', 'm', 'km', 'dist', 'auto'
]:
options.along = 'auto'
if options.along == 'auto':
options.along = 'lon' if xx.max() - xx.min() > yy.max() - yy.min(
) else 'lat'
if options.along == 'lon':
taxis = create_lon(lons)
elif options.along == 'lat':
taxis = create_lat(lats)
else:
xy = N.sqrt((xx - xx[0])**2 + (yy - yy[0])**2)
if xy.max() - xy.min() > 2500 or options.along == 'km':
units = 'km'
xy *= 1e-3
else:
units = 'm'
taxis = cdms2.createAxis(xy)
taxis.units = units
taxis.long_name = 'Distance'
tbathy.setAxis(0, taxis)
# Plot
c = curve2(tbathy,
'k',
print 'Array dimension :', marr.shape
print 'Fill value: ',marr.fill_value
# Back to numpy array ...
nparr=marr.getValue()
# print nparr
# ---- A Cdms2 object = MV2 + Axes + Attributes ...
print 10*'-'+' CDMS2 '+10*'-'
# cdms2.createVariable()
# Geographic axis creation
# - longitude: changing 'lon' id to 'longitude'
ax1 = create_lon(N.arange(10)-7.,id='longitude')
# - latitude
ax2 = create_lat(N.arange(15)*.5+44.)
# ==> Practice: Create cdarr with depth/lat axes. - see doc Vacumm -
# # - depth
# ax1 = create_dep(N.linspace(-1000,0,10))
# # - latitude
# ax2 = create_lat(N.arange(15)*.5+44.)
# ==> Practice: Create cdarr with time/lat axes. - see doc Vacumm -
# # - time
# ax1 = create_time(N.arange(10.),
# 'days since 2006-10-01',long_name='Mon axe de temps')
# # - latitude
# ax2 = create_lat(N.arange(15)*.5+44.)
lo = U.getLongitude()
la = U.getLatitude()
# Longitudes toute les 1 minute
loi = np.arange(lo[0],lo[-1],1./60.)
# Latitudes toute les 1 minute
lai = np.arange(la[0],la[-1],1./60.)
xo = cdms2.createAxis(loi)
yo = cdms2.createAxis(lai)
LONGITUDE = create_lon(loi, id='longitude', attributes=dict(long_name='Longitude of each location',standard_name='longitude',units='degrees_east',valid_min='-180.',valid_max='180.',axis='X'))
LATITUDE = create_lat(lai, id='latitude', attributes=dict(long_name='Latitude of each location',standard_name='latitude',units='degrees_north',valid_min='-90.',valid_max='90.',axis='Y'))
z = U.getLevel()
DEPTH = create_dep(z,attributes=dict(long_name='sea water depth',standard_name='depth',units='m',valid_min='0.',valid_max='12000.'))
#axes = [TIME,DEPTH,LATITUDE,LONGITUDE]
axes = [DEPTH,LATITUDE,LONGITUDE]
Uis=np.arange(U.getLevel().__len__()*yo.__len__()*xo.__len__()).reshape(U.getLevel().__len__(),yo.__len__(),xo.__len__())
Vis=np.arange(U.getLevel().__len__()*yo.__len__()*xo.__len__()).reshape(U.getLevel().__len__(),yo.__len__(),xo.__len__())
Uis = cdms2.createVariable(Uis, typecode='f',id='UZ', axes=axes, attributes=dict(long_name='3d zonal velocity',standard_name='eastward_sea_water_velocity',units='m.s-1',valid_min='-100.',valid_max='100.'))
Vis = cdms2.createVariable(Vis, typecode='f',id='VZ', axes=axes, attributes=dict(long_name='3d meridional velocity',standard_name='northward_sea_water_velocity',units='m.s-1',valid_min='-100.',valid_max='100.'))
# Grid (15x15)
nx, ny = 15, 10
import numpy as N
from vacumm.misc.axes import create_lon, create_lat
lon = create_lon(N.linspace(-5.2, -4.4, nx))
lat = create_lat(N.linspace(48, 48.6, ny))
# Plot params
import pylab as P
import vacumm.misc.color as C
P.figure(figsize=(6, 5))
P.subplots_adjust(top=.92,left=.03,bottom=.03,wspace=.05,hspace=.2)
kwplot = dict(colorbar=False,cmap=C.cmap_linear([(.6, .8, 1), C.land]), \
contour=False,show=False,fillcontinents=False,fill='pcolor',
drawmeridians=False, drawparallels=False, res='h', key=True, xymasked=False)
# Mask using shoreline
from vacumm.misc.grid.masking import polygon_mask
from vacumm.misc.plot import map2
import MV2 as MV
# - mask if central point sur terre (mode = 0 = 'inside')
lon2,lat2 = N.meshgrid(lon,lat)
mask0 = polygon_mask((lon2, lat2), 'h', mode=0, ocean=False)
mask0 = MV.array(mask0, axes=[lat, lon])
mask0.long_name = "'inside'"
map2(mask0, subplot=221, **kwplot)
# - mask if cell more than 50% of land (mode = 1 = 'intersect')
thresholds = .5
mask1 = polygon_mask((lon2, lat2), 'h', mode=1, thresholds=thresholds, ocean=False)
mask1 = MV.array(mask1, axes=[lat, lon])
mask1.long_name = "'intersect': threshold=%g" %thresholds