示例#1
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文件: v0_9_1.py 项目: cjh1/VisTrails
def translateVistrail(_vistrail):
    def update_key(old_obj, translate_dict):
        return '__notes__'

    def update_annotation(old_obj, translate_dict):
        new_dict = {'DBAnnotation': {'key': update_key}}
        new_list = []
        for annotation in old_obj.db_annotations:
            if annotation.db_key == 'notes':
                new_list.append(DBAnnotation.update_version(annotation, 
                                                            new_dict))
            else:
                new_list.append(DBAnnotation.update_version(annotation,
                                                            {}))
        return new_list
                
    def update_session(old_obj, translate_dict):
        if not old_obj.db_session:
            session = None
        else:
            session = long(old_obj.db_session)
        return session

    def update_workflow(old_obj, translate_dict):
        return DBWorkflow.update_version(old_obj.db_workflow, translate_dict)

    translate_dict = {'DBAction': {'annotations': update_annotation,
                                   'session': update_session},
                      'DBGroup': {'workflow': update_workflow}}
    # pass DBVistrail because domain contains enriched version of the auto_gen
    vistrail = DBVistrail.update_version(_vistrail, translate_dict)
    vistrail.db_version = '0.9.3'
    return vistrail
示例#2
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def translateVistrail(_vistrail):
    def update_key(old_obj, translate_dict):
        return '__notes__'

    def update_annotation(old_obj, translate_dict):
        new_dict = {'DBAnnotation': {'key': update_key}}
        new_list = []
        for annotation in old_obj.db_annotations:
            if annotation.db_key == 'notes':
                new_list.append(DBAnnotation.update_version(annotation, 
                                                            new_dict))
            else:
                new_list.append(DBAnnotation.update_version(annotation,
                                                            {}))
        return new_list
                
    def update_session(old_obj, translate_dict):
        if not old_obj.db_session:
            session = None
        else:
            session = long(old_obj.db_session)
        return session

    def update_workflow(old_obj, translate_dict):
        return DBWorkflow.update_version(old_obj.db_workflow, translate_dict)

    translate_dict = {'DBAction': {'annotations': update_annotation,
                                   'session': update_session},
                      'DBGroup': {'workflow': update_workflow}}
    # pass DBVistrail because domain contains enriched version of the auto_gen
    vistrail = DBVistrail.update_version(_vistrail, translate_dict)
    vistrail.db_version = '0.9.3'
    return vistrail
def translateVistrail(_vistrail):
    def update_key(old_obj, translate_dict):
        return "__notes__"

    def update_annotation(old_obj, translate_dict):
        new_dict = {"DBAnnotation": {"key": update_key}}
        new_list = []
        for annotation in old_obj.db_annotations:
            if annotation.db_key == "notes":
                new_list.append(DBAnnotation.update_version(annotation, new_dict))
            else:
                new_list.append(DBAnnotation.update_version(annotation, {}))
        return new_list

    def update_session(old_obj, translate_dict):
        if not old_obj.db_session:
            session = None
        else:
            session = long(old_obj.db_session)
        return session

    def update_workflow(old_obj, translate_dict):
        return DBWorkflow.update_version(old_obj.db_workflow, translate_dict)

    translate_dict = {
        "DBAction": {"annotations": update_annotation, "session": update_session},
        "DBGroup": {"workflow": update_workflow},
    }
    # pass DBVistrail because domain contains enriched version of the auto_gen
    vistrail = DBVistrail.update_version(_vistrail, translate_dict)
    vistrail.db_version = "0.9.3"
    return vistrail
示例#4
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def translateVistrail(_vistrail):
    vistrail = DBVistrail()

    for _action in _vistrail.db_actions:
        ops = []
        for op in _action.db_operations:
            if op.vtType == 'add':
                data = convert_data(op.db_data)
                ops.append(
                    DBAdd(id=op.db_id,
                          what=op.db_what,
                          objectId=op.db_objectId,
                          parentObjId=op.db_parentObjId,
                          parentObjType=op.db_parentObjType,
                          data=data))
            elif op.vtType == 'change':
                data = convert_data(op.db_data)
                ops.append(
                    DBChange(id=op.db_id,
                             what=op.db_what,
                             oldObjId=op.db_oldObjId,
                             newObjId=op.db_newObjId,
                             parentObjId=op.db_parentObjId,
                             parentObjType=op.db_parentObjType,
                             data=data))
            elif op.vtType == 'delete':
                ops.append(
                    DBDelete(id=op.db_id,
                             what=op.db_what,
                             objectId=op.db_objectId,
                             parentObjId=op.db_parentObjId,
                             parentObjType=op.db_parentObjType))
        annotations = []
        for annotation in _action.db_annotations:
            annotations.append(
                DBAnnotation(id=annotation.db_id,
                             key=annotation.db_key,
                             value=annotation.db_value))
        session = _action.db_session
        if not session:
            session = None
        else:
            session = long(_action.db_session)

        action = DBAction(id=_action.db_id,
                          prevId=_action.db_prevId,
                          date=_action.db_date,
                          user=_action.db_user,
                          prune=_action.db_prune,
                          session=session,
                          operations=ops,
                          annotations=annotations)
        vistrail.db_add_action(action)

    for _tag in _vistrail.db_tags:
        tag = DBTag(id=_tag.db_id, name=_tag.db_name)
        vistrail.db_add_tag(tag)

    vistrail.db_version = '0.9.3'
    return vistrail
示例#5
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def translateVistrail(_vistrail):
    def update_operations(old_obj, trans_dict):
        def update_abstraction(old_obj, trans_dict):
            def get_version(old_obj, trans_dict):
                return long(old_obj.db_internal_version)

            new_dict = {'DBAbstractionRef': {'version': get_version}}
            new_dict.update(trans_dict)
            return DBAbstractionRef.update_version(old_obj.db_data, new_dict)

        new_ops = []
        for obj in old_obj.db_operations:
            if obj.vtType == 'add':
                if obj.db_what == 'abstraction':
                    trans_dict['DBAdd'] = {'data': update_abstraction}
                    new_op = DBAdd.update_version(obj, trans_dict)
                    new_op.db_what = 'abstractionRef'
                    new_ops.append(new_op)
                    del trans_dict['DBAdd']
                else:
                    new_op = DBAdd.update_version(obj, trans_dict)
                    if obj.db_parentObjType == 'abstraction':
                        new_op.db_parentObjType = 'abstractionRef'
                    new_ops.append(new_op)
            elif obj.vtType == 'delete':
                new_ops.append(DBDelete.update_version(obj, trans_dict))
            elif obj.vtType == 'change':
                if obj.db_what == 'abstraction':
                    trans_dict['DBChange'] = {'data': update_abstraction}
                    new_op = DBChange.update_version(obj, trans_dict)
                    new_op.db_what = 'abstractionRef'
                    new_ops.append(new_op)
                    del trans_dict['DBChange']
                else:
                    new_op = DBChange.update_version(obj, trans_dict)
                    if obj.db_parentObjType == 'abstraction':
                        new_op.db_parentObjType = 'abstractionRef'
                    new_ops.append(new_op)
        return new_ops

    translate_dict = {
        'DBGroup': {
            'workflow': update_workflow
        },
        'DBAction': {
            'operations': update_operations
        },
        'DBWorkflow': {
            'modules': update_modules
        }
    }
    # pass DBVistrail because domain contains enriched version of the auto_gen
    vistrail = DBVistrail.update_version(_vistrail, translate_dict)
    vistrail.db_version = '0.9.3'
    return vistrail
示例#6
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def translateVistrail(_vistrail):
    vistrail = DBVistrail()

    for _action in _vistrail.db_actions:
        ops = []
        for op in _action.db_operations:
            if op.vtType == 'add':
                data = convert_data(op.db_data)
                ops.append(DBAdd(id=op.db_id,
                                 what=op.db_what,
                                 objectId=op.db_objectId,
                                 parentObjId=op.db_parentObjId,
                                 parentObjType=op.db_parentObjType,
                                 data=data))
            elif op.vtType == 'change':
                data = convert_data(op.db_data)
                ops.append(DBChange(id=op.db_id,
                                    what=op.db_what,
                                    oldObjId=op.db_oldObjId,
                                    newObjId=op.db_newObjId,
                                    parentObjId=op.db_parentObjId,
                                    parentObjType=op.db_parentObjType,
                                    data=data))
            elif op.vtType == 'delete':
                ops.append(DBDelete(id=op.db_id,
                                    what=op.db_what,
                                    objectId=op.db_objectId,
                                    parentObjId=op.db_parentObjId,
                                    parentObjType=op.db_parentObjType))
        annotations = []
        for annotation in _action.db_annotations:
            annotations.append(DBAnnotation(id=annotation.db_id,
                                            key=annotation.db_key,
                                            value=annotation.db_value))
        session = _action.db_session
        if not session:
            session = None
        else:
            session = long(_action.db_session)

        action = DBAction(id=_action.db_id,
                          prevId=_action.db_prevId,
                          date=_action.db_date,
                          user=_action.db_user,
                          prune=_action.db_prune,
                          session=session,
                          operations=ops,
                          annotations=annotations)
        vistrail.db_add_action(action)

    for _tag in _vistrail.db_tags:
        tag = DBTag(id=_tag.db_id,
                    name=_tag.db_name)
        vistrail.db_add_tag(tag)

    vistrail.db_version = '0.9.3'
    return vistrail
示例#7
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def translateVistrail(_vistrail):
    def update_operations(old_obj, trans_dict):
        def update_abstraction(old_obj, trans_dict):
            def get_version(old_obj, trans_dict):
                return long(old_obj.db_internal_version)

            new_dict = {"DBAbstractionRef": {"version": get_version}}
            new_dict.update(trans_dict)
            return DBAbstractionRef.update_version(old_obj.db_data, new_dict)

        new_ops = []
        for obj in old_obj.db_operations:
            if obj.vtType == "add":
                if obj.db_what == "abstraction":
                    trans_dict["DBAdd"] = {"data": update_abstraction}
                    new_op = DBAdd.update_version(obj, trans_dict)
                    new_op.db_what = "abstractionRef"
                    new_ops.append(new_op)
                    del trans_dict["DBAdd"]
                else:
                    new_op = DBAdd.update_version(obj, trans_dict)
                    if obj.db_parentObjType == "abstraction":
                        new_op.db_parentObjType = "abstractionRef"
                    new_ops.append(new_op)
            elif obj.vtType == "delete":
                new_ops.append(DBDelete.update_version(obj, trans_dict))
            elif obj.vtType == "change":
                if obj.db_what == "abstraction":
                    trans_dict["DBChange"] = {"data": update_abstraction}
                    new_op = DBChange.update_version(obj, trans_dict)
                    new_op.db_what = "abstractionRef"
                    new_ops.append(new_op)
                    del trans_dict["DBChange"]
                else:
                    new_op = DBChange.update_version(obj, trans_dict)
                    if obj.db_parentObjType == "abstraction":
                        new_op.db_parentObjType = "abstractionRef"
                    new_ops.append(new_op)
        return new_ops

    translate_dict = {
        "DBGroup": {"workflow": update_workflow},
        "DBAction": {"operations": update_operations},
        "DBWorkflow": {"modules": update_modules},
    }
    # pass DBVistrail because domain contains enriched version of the auto_gen
    vistrail = DBVistrail.update_version(_vistrail, translate_dict)
    vistrail.db_version = "0.9.3"
    return vistrail
示例#8
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文件: v0_9_4.py 项目: Nikea/VisTrails
def translateVistrail(_vistrail):
    def update_operations(old_obj, trans_dict):
        def update_abstraction(old_obj, trans_dict):
            def get_version(old_obj, trans_dict):
                return long(old_obj.db_internal_version)
            new_dict = {'DBAbstractionRef': {'version': get_version}}
            new_dict.update(trans_dict)
            return DBAbstractionRef.update_version(old_obj.db_data, new_dict)
        new_ops = []
        for obj in old_obj.db_operations:
            if obj.vtType == 'add':
                if obj.db_what == 'abstraction':
                    trans_dict['DBAdd'] = {'data': update_abstraction}
                    new_op = DBAdd.update_version(obj, trans_dict)
                    new_op.db_what = 'abstractionRef'
                    new_ops.append(new_op)
                    del trans_dict['DBAdd']
                else:
                    new_op = DBAdd.update_version(obj, trans_dict)
                    if obj.db_parentObjType == 'abstraction':
                        new_op.db_parentObjType = 'abstractionRef'
                    new_ops.append(new_op)
            elif obj.vtType == 'delete':
                new_ops.append(DBDelete.update_version(obj, trans_dict))
            elif obj.vtType == 'change':
                if obj.db_what == 'abstraction':
                    trans_dict['DBChange'] = {'data': update_abstraction}
                    new_op = DBChange.update_version(obj, trans_dict)
                    new_op.db_what = 'abstractionRef'
                    new_ops.append(new_op)
                    del trans_dict['DBChange']
                else:
                    new_op = DBChange.update_version(obj, trans_dict)
                    if obj.db_parentObjType == 'abstraction':
                        new_op.db_parentObjType = 'abstractionRef'
                    new_ops.append(new_op)
        return new_ops

    translate_dict = {'DBGroup': {'workflow': update_workflow},
                      'DBAction': {'operations': update_operations},
                      'DBWorkflow': {'modules': update_modules}}
    # pass DBVistrail because domain contains enriched version of the auto_gen
    vistrail = DBVistrail.update_version(_vistrail, translate_dict)
    vistrail.db_version = '0.9.3'
    return vistrail