def get_subjects(study_name):
conn = ws.connect(settings.WEBSERVICE_URL, ws.SUBJ_WSDL)
ws.authenticate(conn, (settings.OC_USER, settings.OC_PASS))
subj_ids = sorted(ws.all_subjects(conn, study_name))
for s in subj_ids:
reg_status = None
reg_info = None
try:
user = UserProfile.objects.get(subject_id=s, study_name=study_name)
reg_status = 'registered'
reg_info = user.user.username
except UserProfile.DoesNotExist:
pass
try:
pending_reg = PendingRegistration.objects.get(subj_id=s, study_name=study_name)
reg_status = 'pending'
reg_info = pending_reg.reg_code
except PendingRegistration.DoesNotExist:
pass
yield {
'id': s,
'reg_status': reg_status,
'reg_info': reg_info,
}
def get_subject_schedule(subject_id, study_id):
conn = ws.connect(settings.WEBSERVICE_URL, ws.SUBJ_WSDL)
ws.authenticate(conn, (settings.OC_USER, settings.OC_PASS))
sched = ws.get_schedule(conn, subject_id, study_id)
sd = sched.find('.//%s' % _('SubjectData'))
subj_oid = sd.attrib['SubjectKey']
def crfs():
for sed in sd.findall(_('StudyEventData')):
# ignore study event status for now
event_oid = sed.attrib['StudyEventOID']
ordinal = sed.attrib.get('StudyEventRepeatKey')
if ordinal:
ordinal = int(ordinal)
# hack: treat this as a due date for demo purposes
start_date = sed.attrib.get(_('StartDate', 'oc'))
if start_date:
due = datetime.strptime(start_date, '%Y-%m-%d').date()
else:
due = date.today() + timedelta(days=3)
for fd in sed.findall(_('FormData')):
form_oid = fd.attrib['FormOID']
status = fd.attrib[_('Status', 'oc')]
if status == 'not started':
yield {'form_oid': form_oid, 'event_oid': event_oid, 'ordinal': ordinal, 'due': due.strftime('%Y-%m-%d')}
return {
'subject_oid': subj_oid,
'upcoming': sorted(list(crfs()), key=lambda c: c['due']),
}
def _func(self, f, wsdl, auth):
conn = self.wsdl[wsdl]
ws.authenticate(conn, auth)
def _exec(*args, **kwargs):
try:
return f(self.wsdl[wsdl], *args, **kwargs)
except Exception, e:
msg = str(e).lower()
if 'authentication' in msg and 'failed' in msg: #ghetto
raise AuthenticationFailed()
else:
raise
def get_studies():
conn = ws.connect(settings.WEBSERVICE_URL, ws.STUDY_WSDL)
ws.authenticate(conn, (settings.OC_USER, settings.OC_PASS))
studies = ws.list_studies(conn)
for study in studies:
try:
existing = Study.objects.get(oid=study['oid'])
# TODO: update info here if changed
except Study.DoesNotExist:
new_study = Study(**study)
new_study.save()
return studies
def study_export(study_name):
conn = ws.connect(settings.WEBSERVICE_URL, ws.STUDY_WSDL)
ws.authenticate(conn, (settings.OC_USER, settings.OC_PASS))
return ws.study_export(conn, study_name)