def get_queryset(self):
inst = self.get_institution()
query = self.get_query_from_request()
nodes = list(Node.find_by_institution(inst, query))
return [node for node in nodes if not node.is_retracted]
def get_queryset(self):
inst = self.get_institution()
query = self.get_query_from_request()
return Node.find_by_institution(inst, query)
def main(env):
INSTITUTIONS = []
if env == 'prod':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science',
'description': 'COS is a non-profit technology company providing free and open services to increase inclusivity and transparency of research. Find out more at <a href="https://cos.io">cos.io</a>.',
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['osf.cos.io'],
'email_domains': ['cos.io'],
},
# {
# '_id': 'nd',
# 'name': 'University of Notre Dame',
# 'description': None,
# 'banner_name': 'nd-banner.png',
# 'logo_name': 'nd-shield.png',
# 'auth_url': SHIBBOLETH_SP.format(encode_uri_component('https://login.nd.edu/idp/shibboleth')),
# 'domains': ['osf.nd.edu'],
# 'email_domains': [],
# },
{
'_id': 'ucr',
'name': 'University of California Riverside',
'description': 'Policy prohibits storing PII or HIPAA data on this site, please see C&C\'s <a href="http://cnc.ucr.edu/security/researchers.html">security site</a> for more information.',
'banner_name': 'ucr-banner.png',
'logo_name': 'ucr-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('urn:mace:incommon:ucr.edu')),
'domains': ['osf.ucr.edu'],
'email_domains': [],
},
# {
# '_id': 'ugent',
# 'name': 'Universiteit Gent [Test]',
# 'description': None,
# 'banner_name': 'ugent-banner.png',
# 'logo_name': 'ugent-shield.png',
# 'auth_url': SHIBBOLETH_SP.format(encode_uri_component('https://identity.ugent.be/simplesaml/saml2/idp/metadata.php')),
# 'domains': ['osf.ugent.be'],
# 'email_domains': [],
# },
{
'_id': 'usc',
'name': 'University of Southern California',
'description': 'Projects must abide by <a href="http://policy.usc.edu/info-security/">USC\'s Information Security Policy</a>. Data stored for human subject research repositories must abide by <a href="http://policy.usc.edu/biorepositories/">USC\'s Biorepository Policy</a>. The OSF may not be used for storage of Personal Health Information that is subject to <a href="http://policy.usc.edu/hipaa/">HIPPA regulations</a>.',
'banner_name': 'usc-banner.png',
'logo_name': 'usc-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('urn:mace:incommon:usc.edu')),
'domains': ['osf.usc.edu'],
'email_domains': [],
},
# {
# '_id': 'uva',
# 'name': 'University of Virginia',
# 'description': 'Projects must abide by the University <a href="http://www.virginia.edu/informationpolicy/security.html">Security and Data Protection Policies</a>',
# 'banner_name': 'uva-banner.png',
# 'logo_name': 'uva-shield.png',
# 'auth_url': SHIBBOLETH_SP.format(encode_uri_component('urn:mace:incommon:virginia.edu')),
# 'domains': ['osf.virginia.edu'],
# 'email_domains': [],
# },
]
if env == 'stage':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science [Stage]',
'description': 'Center for Open Science [Stage]',
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['staging-osf.cos.io'],
'email_domains': ['cos.io'],
},
{
'_id': 'nd',
'name': 'University of Notre Dame [Stage]',
'description': 'University of Notre Dame [Stage]',
'banner_name': 'nd-banner.png',
'logo_name': 'nd-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('https://login-test.cc.nd.edu/idp/shibboleth')),
'domains': ['staging-osf-nd.cos.io'],
'email_domains': [],
},
]
if env == 'stage2':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science [Stage2]',
'description': 'Center for Open Science [Stage2]',
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['staging2-osf.cos.io'],
'email_domains': ['cos.io'],
},
]
elif env == 'test':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science [Test]',
'description': 'COS is a non-profit technology company providing free and open services to increase inclusivity and transparency of research. Find out more at <a href="https://cos.io">cos.io</a>.',
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['test-osf.cos.io'],
'email_domains': ['cos.io'],
},
{
'_id': 'nd',
'name': 'University of Notre Dame [Test]',
'description': 'University of Notre Dame [Test]',
'banner_name': 'nd-banner.png',
'logo_name': 'nd-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('https://login-test.cc.nd.edu/idp/shibboleth')),
'domains': ['test-osf-nd.cos.io'],
'email_domains': [],
},
{
'_id': 'ucr',
'name': 'University of California Riverside [Test]',
'description': 'Policy prohibits storing PII or HIPAA data on this site, please see C&C\'s <a href="http://cnc.ucr.edu/security/researchers.html">security site</a> for more information.',
'banner_name': 'ucr-banner.png',
'logo_name': 'ucr-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('urn:mace:incommon:ucr.edu')),
'domains': ['test-osf-ucr.cos.io'],
'email_domains': [],
},
{
'_id': 'ugent',
'name': 'Universiteit Gent [Test]',
'description': 'Universiteit Gent [Test]',
'banner_name': 'ugent-banner.png',
'logo_name': 'ugent-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('https://identity.ugent.be/simplesaml/saml2/idp/metadata.php')),
'domains': ['test-osf-ugent.cos.io'],
'email_domains': [],
},
{
'_id': 'usc',
'name': 'University of Southern California [Test]',
'description': 'Projects must abide by <a href="http://policy.usc.edu/info-security/">USC\'s Information Security Policy</a>. Data stored for human subject research repositories must abide by <a href="http://policy.usc.edu/biorepositories/">USC\'s Biorepository Policy</a>. The OSF may not be used for storage of Personal Health Information that is subject to <a href="http://policy.usc.edu/hipaa/">HIPPA regulations</a>.',
'banner_name': 'usc-banner.png',
'logo_name': 'usc-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('urn:mace:incommon:usc.edu')),
'domains': ['test-osf-usc.cos.io'],
'email_domains': [],
},
{
'_id': 'uva',
'name': 'University of Virginia [Test]',
'description': 'Projects must abide by the University <a href="http://www.virginia.edu/informationpolicy/security.html">Security and Data Protection Policies</a>',
'banner_name': 'uva-banner.png',
'logo_name': 'uva-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('https://shibidp-test.its.virginia.edu/idp/shibboleth')),
'domains': ['test-osf-virginia.cos.io'],
'email_domains': [],
},
]
init_app(routes=False)
with TokuTransaction():
for inst_data in INSTITUTIONS:
new_inst, inst_created = update_or_create(inst_data)
# update the nodes elastic docs, to have current names of institutions. This will
# only work properly if this file is the only thing changing institution attributes
if not inst_created:
nodes = Node.find_by_institution(new_inst, query=Q('is_deleted', 'ne', True))
for node in nodes:
update_node(node, async=False)
for extra_inst in Institution.find(Q('_id', 'nin', [x['_id'] for x in INSTITUTIONS])):
logger.warn('Extra Institution : {} - {}'.format(extra_inst._id, extra_inst.name))
def main(env):
INSTITUTIONS = []
if env == 'prod':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science',
'description': 'COS is a non-profit technology company providing free and open services to increase inclusivity and transparency of research. Find out more at <a href="https://cos.io">cos.io</a>.',
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['osf.cos.io'],
'email_domains': ['cos.io'],
},
# {
# '_id': 'nd',
# 'name': 'University of Notre Dame',
# 'description': None,
# 'banner_name': 'nd-banner.png',
# 'logo_name': 'nd-shield.png',
# 'auth_url': SHIBBOLETH_SP.format(encode_uri_component('https://login.nd.edu/idp/shibboleth')),
# 'domains': ['osf.nd.edu'],
# 'email_domains': [],
# },
{
'_id': 'ucr',
'name': 'University of California Riverside',
'description': 'Policy prohibits storing PII or HIPAA data on this site, please see C&C\'s <a href="http://cnc.ucr.edu/security/researchers.html">security site</a> for more information.',
'banner_name': 'ucr-banner.png',
'logo_name': 'ucr-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('urn:mace:incommon:ucr.edu')),
'domains': ['osf.ucr.edu'],
'email_domains': [],
},
{
'_id': 'usc',
'name': 'University of Southern California',
'description': 'Projects must abide by <a href="http://policy.usc.edu/info-security/">USC\'s Information Security Policy</a>. Data stored for human subject research repositories must abide by <a href="http://policy.usc.edu/biorepositories/">USC\'s Biorepository Policy</a>. The OSF may not be used for storage of Personal Health Information that is subject to <a href="http://policy.usc.edu/hipaa/">HIPPA regulations</a>.',
'banner_name': 'usc-banner.png',
'logo_name': 'usc-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('urn:mace:incommon:usc.edu')),
'domains': ['osf.usc.edu'],
'email_domains': [],
},
]
if env == 'stage':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science [Stage]',
'description': 'Center for Open Science [Stage]',
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['staging-osf.cos.io'],
'email_domains': ['cos.io'],
},
{
'_id': 'nd',
'name': 'University of Notre Dame [Stage]',
'description': 'University of Notre Dame [Stage]',
'banner_name': 'nd-banner.png',
'logo_name': 'nd-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('https://login-test.cc.nd.edu/idp/shibboleth')),
'domains': ['staging-osf-nd.cos.io'],
'email_domains': [],
},
]
if env == 'stage2':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science [Stage2]',
'description': 'Center for Open Science [Stage2]',
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['staging2-osf.cos.io'],
'email_domains': ['cos.io'],
},
]
elif env == 'test':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science [Test]',
'description': 'Center for Open Science [Test]',
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['test-osf.cos.io'],
'email_domains': ['cos.io'],
},
{
'_id': 'nd',
'name': 'University of Notre Dame [Test]',
'description': 'University of Notre Dame [Test]',
'banner_name': 'nd-banner.png',
'logo_name': 'nd-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('https://login-test.cc.nd.edu/idp/shibboleth')),
'domains': ['test-osf-nd.cos.io'],
'email_domains': [],
},
{
'_id': 'ucr',
'name': 'University of California Riverside [Test]',
'description': 'University of California Riverside [Test]',
'banner_name': 'ucr-banner.png',
'logo_name': 'ucr-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('urn:mace:incommon:ucr.edu')),
'domains': ['test-osf-ucr.cos.io'],
'email_domains': [],
},
{
'_id': 'usc',
'name': 'University of Southern California [Test]',
'description': 'University of Southern California [Test]',
'banner_name': 'usc-banner.png',
'logo_name': 'usc-shield.png',
'auth_url': SHIBBOLETH_SP.format(encode_uri_component('urn:mace:incommon:usc.edu')),
'domains': ['test-osf-usc.cos.io'],
'email_domains': [],
},
]
init_app(routes=False)
with TokuTransaction():
for inst_data in INSTITUTIONS:
new_inst, inst_created = update_or_create(inst_data)
# update the nodes elastic docs, to have current names of institutions. This will
# only work properly if this file is the only thign changing institution attributes
if not inst_created:
nodes = Node.find_by_institution(new_inst, query=Q('is_deleted', 'ne', True))
for node in nodes:
update_node(node, async=False)
for extra_inst in Institution.find(Q('_id', 'nin', [x['_id'] for x in INSTITUTIONS])):
logger.warn('Extra Institution : {} - {}'.format(extra_inst._id, extra_inst.name))
def main(env):
INSTITUTIONS = []
if env == 'prod':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science',
'description': None,
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['osf.cos.io'],
'email_domains': ['cos.io'],
},
# {
# '_id': 'nd',
# 'name': 'University of Notre Dame',
# 'description': None,
# 'banner_name': 'nd-banner.png',
# 'logo_name': 'nd-shield.png',
# 'auth_url': SHIBBOLETH_SP.format(encode_uri_component('https://login.nd.edu/idp/shibboleth')),
# 'domains': ['osf.nd.edu'],
# 'email_domains': [],
# },
{
'_id':
'ucr',
'name':
'University of California Riverside',
'description':
None,
'banner_name':
'ucr-banner.png',
'logo_name':
'ucr-shield.png',
'auth_url':
SHIBBOLETH_SP.format(
encode_uri_component('urn:mace:incommon:ucr.edu')),
'domains': ['osf.ucr.edu'],
'email_domains': [],
},
{
'_id':
'usc',
'name':
'University of Southern California',
'description':
'Projects must abide by <a href="http://policy.usc.edu/info-security/">USC\'s Information Security Policy</a>. Data stored for human subject research repositories must abide by <a href="http://policy.usc.edu/biorepositories/">USC\'s Biorepository Policy</a>. The OSF may not be used for storage of Personal Health Information that is subject to <a href="http://policy.usc.edu/hipaa/">HIPPA regulations</a>.',
'banner_name':
'usc-banner.png',
'logo_name':
'usc-shield.png',
'auth_url':
SHIBBOLETH_SP.format(
encode_uri_component('urn:mace:incommon:usc.edu')),
'domains': ['osf.usc.edu'],
'email_domains': [],
},
]
if env == 'stage':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science [Stage]',
'description': 'Center for Open Science [Stage]',
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['staging-osf.cos.io'],
'email_domains': ['cos.io'],
},
{
'_id':
'nd',
'name':
'University of Notre Dame [Stage]',
'description':
'University of Notre Dame [Stage]',
'banner_name':
'nd-banner.png',
'logo_name':
'nd-shield.png',
'auth_url':
SHIBBOLETH_SP.format(
encode_uri_component(
'https://login-test.cc.nd.edu/idp/shibboleth')),
'domains': ['staging-osf-nd.cos.io'],
'email_domains': [],
},
]
if env == 'stage2':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science [Stage2]',
'description': 'Center for Open Science [Stage2]',
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['staging2-osf.cos.io'],
'email_domains': ['cos.io'],
},
]
elif env == 'test':
INSTITUTIONS = [
{
'_id': 'cos',
'name': 'Center For Open Science [Test]',
'description': 'Center for Open Science [Test]',
'banner_name': 'cos-banner.png',
'logo_name': 'cos-shield.png',
'auth_url': None,
'domains': ['test-osf.cos.io'],
'email_domains': ['cos.io'],
},
{
'_id':
'nd',
'name':
'University of Notre Dame [Test]',
'description':
'University of Notre Dame [Test]',
'banner_name':
'nd-banner.png',
'logo_name':
'nd-shield.png',
'auth_url':
SHIBBOLETH_SP.format(
encode_uri_component(
'https://login-test.cc.nd.edu/idp/shibboleth')),
'domains': ['test-osf-nd.cos.io'],
'email_domains': [],
},
{
'_id':
'ucr',
'name':
'University of California Riverside [Test]',
'description':
'University of California Riverside [Test]',
'banner_name':
'ucr-banner.png',
'logo_name':
'ucr-shield.png',
'auth_url':
SHIBBOLETH_SP.format(
encode_uri_component('urn:mace:incommon:ucr.edu')),
'domains': ['test-osf-ucr.cos.io'],
'email_domains': [],
},
{
'_id':
'usc',
'name':
'University of Southern California [Test]',
'description':
'University of Southern California [Test]',
'banner_name':
'usc-banner.png',
'logo_name':
'usc-shield.png',
'auth_url':
SHIBBOLETH_SP.format(
encode_uri_component('urn:mace:incommon:usc.edu')),
'domains': ['test-osf-usc.cos.io'],
'email_domains': [],
},
]
init_app(routes=False)
with TokuTransaction():
for inst_data in INSTITUTIONS:
new_inst, inst_created = update_or_create(inst_data)
# update the nodes elastic docs, to have current names of institutions. This will
# only work properly if this file is the only thign changing institution attributes
if not inst_created:
nodes = Node.find_by_institution(new_inst,
query=Q(
'is_deleted', 'ne', True))
for node in nodes:
update_node(node, async=False)
for extra_inst in Institution.find(
Q('_id', 'nin', [x['_id'] for x in INSTITUTIONS])):
logger.warn('Extra Institution : {} - {}'.format(
extra_inst._id, extra_inst.name))