def generate_psfgen_patches(): ''' generate the psfgen patches for the dimer dna chains ''' import x_dna.build_mol.seg_pdb2psfgen as pdb2psfgen in_vars = inputs() in_vars.pdb = 'c11_folded_tails.pdb' in_vars.segnames = ['DNA1', 'DNA2'] pdb2psfgen.main(in_vars)
def generate_psfgen_patches(): ''' generate the psfgen patches for the dimer dna chains ''' import x_dna.build_mol.seg_pdb2psfgen as pdb2psfgen in_vars = inputs() in_vars.pdb = '../dna2_right.pdb' in_vars.segnames = ['dummy', 'DNA2'] pdb2psfgen.main(in_vars) in_vars.pdb = '../dna1_right.pdb' in_vars.segnames = ['DNA1', 'dummy'] pdb2psfgen.main(in_vars)
''' generate the psfgen patches for the dimer dna chains ''' class inputs(): def __init__(self, parent=None): pass import x_dna.build_mol.seg_pdb2psfgen as pdb2psfgen in_vars = inputs() in_vars.pdb = 'dna_pdb/w601dna.pdb' in_vars.segnames = ['DNA1', 'DNA2'] pdb2psfgen.main(in_vars)