Beispiel #1
0
def _iter_scorer(train_inds, test_inds, flux_arr, model__and__model_flux_mean, method, score_methods, include_mle):
    model = model__and__model_flux_mean[0]
    model_flux_mean = model__and__model_flux_mean[1]

    flux_test = flux_arr[test_inds]
    flux_conv_test = None

    if score_methods != ['LL']:
        for pca_model in model:
            if flux_conv_test is None:
                flux_conv_test = iz.transform_inverse_transform(flux_test, pca_model, model_flux_mean, method)
                flux_test -= flux_conv_test
            else:
                residual = iz.transform_inverse_transform(flux_test, pca_model, model_flux_mean, method)
                flux_conv_test += residual
                flux_test -= residual

    scores = {}

    for score_method in score_methods:
        #print("Calculating score:" + score_method)

        score_func = iz.get_score_func(score_method)

        if score_func is not None:
            if score_method != 'MAE':
                scores[score_method] = score_func(flux_test, flux_conv_test, multioutput='uniform_average')
            else:
                scores[score_method] = np.mean(np.median(np.abs(flux_test - flux_conv_test), axis=1))

    if (include_mle or score_method == 'LL') and method in ['FA', 'PCA']:
        try:
            scores['mle'] = model.score(flux_test)
        except np.linalg.linalg.LinAlgError:
            scores['mle'] = 0 #-2**10 #float("-inf")
        except ValueError:
            scores['mle'] = 0 #-2**10 #float("-inf")

    #print("Scores: " + str(scores))
    return scores
Beispiel #2
0
def _iter_modeler(train_inds, test_inds, flux_arr, model, method):
    model_list = []
    flux_train = flux_arr[train_inds]
    flux_avg = np.mean(flux_train, axis=0)

    for i in range(2):
        new_model = est_clone(model)
        new_model.fit(flux_train)
        back_train = iz.transform_inverse_transform(flux_train, new_model, flux_avg, method)
        flux_train -= back_train

        model_list.append(new_model)

    return model_list, flux_avg