cl.OA2pH_base = cl.dodsBase + cl.oaDir
cl.OA2pH_files = ['OA2_pH_2013.nc']
cl.OA2pH_parms = ['pH']
cl.OA2pH_startDatetime = startdate
cl.OA2pH_endDatetime = enddate
# Mooring OA2 PCO2
cl.OA2pco2_base = cl.dodsBase + cl.oaDir
cl.OA2pco2_files = ['OA2_pco2_2013.nc']
cl.OA2pco2_parms = ['pCO2']
cl.OA2pco2_startDatetime = startdate
cl.OA2pco2_endDatetime = enddate
# Mooring OA2 O2
cl.OA2o2_base = cl.dodsBase + cl.oaDir
cl.OA2o2_files = ['OA2_o2_2013.nc']
cl.OA2o2_parms = ['oxygen', 'oxygen_saturation']
cl.OA2o2_startDatetime = startdate
cl.OA2o2_endDatetime = enddate
# Mooring OA2 Fluorescence
cl.OA2fl_base = cl.dodsBase + cl.oaDir
cl.OA2fl_files = ['OA2_fl_2013.nc']
cl.OA2fl_parms = ['fluor']
cl.OA2fl_startDatetime = startdate
cl.OA2fl_endDatetime = enddate
######################################################################################################
# SubSample data files from /mbari/BOG_Archive/ReportsForSTOQS/CN13ID copied to local BOG_Data/CN13ID
######################################################################################################
cl.subsample_csv_base = os.path.join(
os.path.dirname(os.path.realpath(__file__)), 'BOG_Data/CN13ID')
cl.subsample_csv_files = [
'STOQS_CN13ID_CARBON_GFF.csv',
cl.OA2pH_base = cl.dodsBase + cl.oaDir cl.OA2pH_files = ['OA2_pH_2013.nc'] cl.OA2pH_parms = ['pH' ] cl.OA2pH_startDatetime = datetime.datetime(*startdate[:]) cl.OA2pH_endDatetime = datetime.datetime(*enddate[:]) # Mooring OA2 PCO2 cl.OA2pco2_base = cl.dodsBase + cl.oaDir cl.OA2pco2_files = ['OA2_pco2_2013.nc'] cl.OA2pco2_parms = ['pCO2' ] cl.OA2pco2_startDatetime = datetime.datetime(*startdate[:]) cl.OA2pco2_endDatetime = datetime.datetime(*enddate[:]) # Mooring OA2 O2 cl.OA2o2_base = cl.dodsBase + cl.oaDir cl.OA2o2_files = ['OA2_o2_2013.nc'] cl.OA2o2_parms = ['oxygen', 'oxygen_saturation' ] cl.OA2o2_startDatetime = datetime.datetime(*startdate[:]) cl.OA2o2_endDatetime = datetime.datetime(*enddate[:]) # Mooring OA2 Fluorescence cl.OA2fl_base = cl.dodsBase + cl.oaDir cl.OA2fl_files = ['OA2_fl_2013.nc'] cl.OA2fl_parms = [ 'fluor' ] cl.OA2fl_startDatetime = datetime.datetime(*startdate[:]) cl.OA2fl_endDatetime = datetime.datetime(*enddate[:]) ####################################################################################### # DRIFTERS ####################################################################################### # Stella 203 cl.stella203_base = cl.dodsBase + 'CANON_september2013/Platforms/Drifters/Stella_1/' cl.stella203_parms = [ 'TEMP', 'pH' ]
cl.OA2pH_base = cl.dodsBase + cl.oaDir
cl.OA2pH_files = ['OA2_pH_2013.nc']
cl.OA2pH_parms = ['pH' ]
cl.OA2pH_startDatetime = datetime.datetime(*startdate[:])
cl.OA2pH_endDatetime = datetime.datetime(*enddate[:])
# Mooring OA2 PCO2
cl.OA2pco2_base = cl.dodsBase + cl.oaDir
cl.OA2pco2_files = ['OA2_pco2_2013.nc']
cl.OA2pco2_parms = ['pCO2' ]
cl.OA2pco2_startDatetime = datetime.datetime(*startdate[:])
cl.OA2pco2_endDatetime = datetime.datetime(*enddate[:])
# Mooring OA2 O2
cl.OA2o2_base = cl.dodsBase + cl.oaDir
cl.OA2o2_files = ['OA2_o2_2013.nc']
cl.OA2o2_parms = ['oxygen', 'oxygen_saturation' ]
cl.OA2o2_startDatetime = datetime.datetime(*startdate[:])
cl.OA2o2_endDatetime = datetime.datetime(*enddate[:])
# Mooring OA2 Fluorescence
cl.OA2fl_base = cl.dodsBase + cl.oaDir
cl.OA2fl_files = ['OA2_fl_2013.nc']
cl.OA2fl_parms = [ 'fluor' ]
cl.OA2fl_startDatetime = datetime.datetime(*startdate[:])
cl.OA2fl_endDatetime = datetime.datetime(*enddate[:])
###################################################################################################################
# Execute the load
cl.process_command_line()
if cl.args.test:
cl.loadOA1ctd(stride=1)
cl.loadOA1met(stride=1)
cl.OA2pH_base = cl.dodsBase + cl.oaDir cl.OA2pH_files = ['OA2_pH_2013.nc'] cl.OA2pH_parms = ['pH' ] cl.OA2pH_startDatetime = startdate cl.OA2pH_endDatetime = enddate # Mooring OA2 PCO2 cl.OA2pco2_base = cl.dodsBase + cl.oaDir cl.OA2pco2_files = ['OA2_pco2_2013.nc'] cl.OA2pco2_parms = ['pCO2' ] cl.OA2pco2_startDatetime = startdate cl.OA2pco2_endDatetime = enddate # Mooring OA2 O2 cl.OA2o2_base = cl.dodsBase + cl.oaDir cl.OA2o2_files = ['OA2_o2_2013.nc'] cl.OA2o2_parms = ['oxygen', 'oxygen_saturation' ] cl.OA2o2_startDatetime = startdate cl.OA2o2_endDatetime = enddate # Mooring OA2 Fluorescence cl.OA2fl_base = cl.dodsBase + cl.oaDir cl.OA2fl_files = ['OA2_fl_2013.nc'] cl.OA2fl_parms = [ 'fluor' ] cl.OA2fl_startDatetime = startdate cl.OA2fl_endDatetime = enddate ####################################################################################### # DRIFTERS ####################################################################################### # Stella drifters, requires input file stella_load.csv with the names of the cl.stella_base = cl.dodsBase + 'CANON_september2013/Platforms/Drifters/Stella_1/' cl.stella_parms = [ 'TEMP', 'pH' ]