def _viewConnect(self, view):
self._graphicSelection = QubPolygoneDrawingMgr(view.canvas(),
view.matrix())
self._graphicSelection.setActionInfo('Grid grab, select the area')
drawingobject = QubCanvasGrid(view.canvas())
self._graphicSelection.addDrawingObject(drawingobject)
self._graphicSelection.setEndDrawCallBack(self.__endGridGrab)
view.addDrawingMgr(self._graphicSelection)
def _viewConnect(self, view):
self._graphicSelection = QubPolygoneDrawingMgr(view.canvas(), view.matrix())
self._graphicSelection.setActionInfo("Grid grab, select the area")
drawingobject = QubCanvasGrid(view.canvas())
self._graphicSelection.addDrawingObject(drawingobject)
self._graphicSelection.setEndDrawCallBack(self.__endGridGrab)
view.addDrawingMgr(self._graphicSelection)
class LookupScanBrick(BaseGraphicScan) :
def __init__(self,parent,name,uifile = 'LookupScan.ui',cmd_name = 'ltscan',**kwargs) :
BaseGraphicScan.__init__(self, parent, name, uifile=uifile, cmd_name=cmd_name, **kwargs)
self._graphicSelection = None
self.__polyNb = 0
self.__gridPoints = None
self._matchPoints = None
self.__offsetMeasure = 1e3
self._ltinit = None
self.addProperty('offsetmeasure','float',1e3)
table = self._widgetTree.child('__gridTable')
qt.QObject.connect(table,qt.SIGNAL('valueChanged(int,int)'),self._valueChangedScanParam)
timeWidget = self._widgetTree.child('__time')
timeWidget.setValidator(qt.QDoubleValidator(timeWidget))
# PopUp Menu
self.__polygonListWidget = self._widgetTree.child('__polygonList')
self.__polygonListWidget.setSelectionMode(qt.QListView.Extended)
self.__polygonPopUpMenu = qt.QPopupMenu(self.__polygonListWidget)
for itemName,cbk in [('Create new',self.__createPolygon),
('Remove',self.__removeSelectedPolygon),
('Revert selection',self.__revertSelectedPolygon)] :
self.__polygonPopUpMenu.insertItem(itemName,cbk)
self.connect(self.__polygonListWidget,qt.SIGNAL('rightButtonPressed(QListViewItem*,const QPoint &,int)'),
self.__polygonPopUpDisplay)
timeWidget = self._widgetTree.child('__time')
self.connect(timeWidget,qt.SIGNAL('returnPressed()'),self.__refreshInfoText)
self.connect(timeWidget,qt.SIGNAL('lostFocus()'),self.__refreshInfoText)
def propertyChanged(self,property,oldValue,newValue) :
if property == 'offsetmeasure':
self.__offsetMeasure = newValue
elif property == 'command' :
BaseGraphicScan.propertyChanged(self,property,oldValue,newValue)
ho = self.getHardwareObject(newValue)
if ho is not None:
try:
self._ltinit = ho.getCommandObject('ltinit')
self._ltinit.connectSignal('commandReplyArrived',self.__ltinitFinished)
except:
self._ltinit = None
logging.getLogger().error('ltinit not find in command file')
startButton = self._widgetTree.child('__startScan')
startButton.setEnabled(False)
else:
BaseGraphicScan.propertyChanged(self,property,oldValue,newValue)
def _setMotor(self,property,motorList) :
if property == 'horizontal':
combo = self._widgetTree.child('__motor1')
else:
combo = self._widgetTree.child('__motor2')
for i in range(combo.count()) :
combo.removeItem(i)
combo.insertStringList(motorList)
def _viewConnect(self,view) :
self._graphicSelection = QubPolygoneDrawingMgr(view.canvas(),
view.matrix())
self._graphicSelection.setActionInfo('Grid grab, select the area')
drawingobject = QubCanvasGrid(view.canvas())
self._graphicSelection.addDrawingObject(drawingobject)
self._graphicSelection.setEndDrawCallBack(self.__endGridGrab)
view.addDrawingMgr(self._graphicSelection)
def __endGridGrab(self,drawingobject) :
self.__createGridPoints()
self._updateGUI()
def _updateGUI(self) :
if self._graphicSelection :
points = self._graphicSelection.points()
if len(points) == 3 and self._XSize and self._YSize :
table = self._widgetTree.child('__gridTable')
try:
dist = math.sqrt(((points[0][0] - points[1][0]) * self._XSize ) ** 2 + \
((points[0][1] - points[1][1]) * self._YSize) ** 2)
table.setText(0,2,self._formatString % (dist * self.__offsetMeasure))
dist = math.sqrt(((points[1][0] - points[2][0]) * self._YSize) ** 2 + \
((points[1][1] - points[2][1]) * self._XSize) ** 2)
table.setText(1,2,self._formatString % (dist * self.__offsetMeasure))
self.__refreshSteps()
except:
import traceback
traceback.print_exc()
def _valueChangedScanParam(self,row,column) :
table = self._widgetTree.child('__gridTable')
if column == 0:
stringVal = table.text(row,column)
val,okFlag = stringVal.toInt()
if okFlag :
if row == 0 :
self._graphicSelection.setNbPointAxis1(val)
else:
self._graphicSelection.setNbPointAxis2(val)
self.__refreshSteps()
self.__createGridPoints()
else:
dialog = qt.QErrorMessage(self)
dialog.message('Interval must be integer')
elif column == 1:
stringVal = table.text(row,column)
step,ok1 = stringVal.toFloat()
stringVal = table.text(row,0)
interval,ok2 = stringVal.toInt()
if ok1 and step > 0.:
if ok2:
distance = interval * step
table.setText(row,2,self._formatString % distance)
self._valueChangedScanParam(row,2)
else:
dialog = qt.QErrorMessage(self)
dialog.message('Step must be a positif float')
elif column == 2:
self.__refreshSteps()
# UPDATE GRAPHIC
points = self._graphicSelection.points()
if len(points) == 3 :
angle = self._graphicSelection.angle()[0] * math.pi / 180
pixelSize = math.sqrt((self._XSize * math.cos(angle)) ** 2 + \
(self._YSize * math.sin(angle)) ** 2)
if row == 0 :
stringVal = table.text(0,2)
dist1,ok1 = stringVal.toFloat()
dist1 /= self.__offsetMeasure
width = dist1 / pixelSize
height = math.sqrt(((points[1][0] - points[2][0])) ** 2 + \
((points[1][1] - points[2][1])) ** 2)
else:
width = math.sqrt(((points[0][0] - points[1][0])) ** 2 + \
((points[0][1] - points[1][1])) ** 2)
stringVal = table.text(1,2)
dist2,ok2 = stringVal.toFloat()
dist2 /= self.__offsetMeasure
height = dist2 / pixelSize
xori,yori = points[0]
p = numpy.array([[xori,yori],[xori + width,yori],[xori + width,yori + height]])
translation = numpy.matrix([xori,yori])
rotation = numpy.matrix([[numpy.cos(-angle),-numpy.sin(-angle)],
[numpy.sin(-angle),numpy.cos(-angle)]])
p -= translation
p = p * rotation
p += translation
self._graphicSelection.setPoints(p.tolist())
def __refreshSteps(self) :
table = self._widgetTree.child('__gridTable')
# DISTANCE
stringVal = table.text(0,2)
dist1,ok1 = stringVal.toFloat()
stringVal = table.text(1,2)
dist2,ok2 = stringVal.toFloat()
# INTERVALS
if ok1 and ok2 :
stringVal = table.text(0,0)
inter1,ok1 = stringVal.toInt()
if ok1:
step = dist1 / inter1
table.setText(0,1,self._formatString % step)
stringVal = table.text(1,0)
inter2,ok2 = stringVal.toInt()
if ok2 :
step = dist2 / inter2
table.setText(1,1,self._formatString % step)
def _movetoStart(self) :
if not self._matchPoints :
return
mot1Widget = self._widgetTree.child('__motor1')
mot2Widget = self._widgetTree.child('__motor2')
mot1 = self.__getMotor(mot1Widget.currentText(),self._horizontalMotors)
mot2 = self.__getMotor(mot2Widget.currentText(),self._verticalMotors)
try:
firstPoint = self._matchPoints.index(True)
except:
return # No scan point
x,y = self.__gridPoints[firstPoint,0],self.__gridPoints[firstPoint,1]
try:
mot1Fp = (x - self._beamx) / mot1.getProperty('unit') * self._XSize
mot2Fp = (y - self._beamy) / mot2.getProperty('unit') * self._YSize
mot1Fp += mot1.getPosition()
mot2Fp += mot2.getPosition()
mot1.move(float(mot1Fp))
mot2.move(float(mot2Fp))
xtranslation,ytranslation = (self._beamx - x,self._beamy - y)
graphicItems = [x.drawingManager for x in self.__getIterator()]
graphicItems.append(self._graphicSelection)
for item in graphicItems :
newPoint = []
for x,y in item.points() :
x,y = (x + xtranslation,y + ytranslation)
newPoint.append((x,y))
item.setPoints(newPoint)
translationMatrix = numpy.matrix([xtranslation,ytranslation])
self.__gridPoints += translationMatrix
self.__setRegion(False)
except AttributeError :
import traceback
traceback.print_exc()
logging.getLogger().error('motors must have a unit field')
def _startScan(self) :
try :
self._matchPoints.index(True) # if not point math -> go to exception
mot1Widget = self._widgetTree.child('__motor1')
mot2Widget = self._widgetTree.child('__motor2')
self._ltinit(str(mot1Widget.currentText()),str(mot2Widget.currentText()))
except ValueError:
dialog = qt.QErrorMessage(self)
dialog.message('Nothing to scan')
return
def __ltinitFinished(self,*args) :
table = self._widgetTree.child('__gridTable')
stringVal = table.text(0,0)
nbColumn,valid = stringVal.toInt()
if not valid :
dialog = qt.QErrorMessage(self)
dialog.message('Interval must be integer')
return
nbColumn += 1
self._logArgs['scan_type'] = 'lookup'
posMot1 = []
posMot2 = []
pointMatchNb = 0
matchPointId = []
for i,(match,point) in enumerate(itertools.izip(self._matchPoints,self.__gridPoints)) :
if match :
posMot1.append(point[0,0])
posMot2.append(point[0,1])
matchPointId.append((i / nbColumn,pointMatchNb))
pointMatchNb += 1
if posMot1:
mot1Widget = self._widgetTree.child('__motor1')
mot2Widget = self._widgetTree.child('__motor2')
timeWidget = self._widgetTree.child('__time')
ctime,valid = timeWidget.text().toFloat()
mot1 = self.__getMotor(mot1Widget.currentText(),self._horizontalMotors)
mot2 = self.__getMotor(mot2Widget.currentText(),self._verticalMotors)
posMot1 = numpy.array(posMot1)
posMot1 -= self._beamx
posMot1 *= (self._XSize / mot1.getProperty('unit'))
posMot1 += mot1.getPosition()
posMot2 = numpy.array(posMot2)
posMot2 -= self._beamy
posMot2 *= (self._YSize / mot2.getProperty('unit'))
posMot2 += mot2.getPosition()
lineStartStop = []
lastLineId = -1
currentPointInLine = []
for lineId,pointId in matchPointId:
if lineId != lastLineId :
if currentPointInLine:
lineStartStop.append(currentPointInLine)
currentPointInLine = [pointId]
lastLineId = lineId
else:
currentPointInLine.append(pointId)
if currentPointInLine :
lineStartStop.append(currentPointInLine)
startIndex = []
stopIndex = []
for line in lineStartStop:
startIndex.append(line[0])
stopIndex.append(line[-1])
startIndex = numpy.array(startIndex)
stopIndex = numpy.array(stopIndex)
specVersion = self._ltinit.specVersion
for motor_name,pos_motor in zip([str(mot1Widget.currentText()),str(mot2Widget.currentText())],
[posMot1,posMot2]) :
ho = self.getHardwareObject(self["command"])
MOTOR_ARRAY = ho.addChannel({"type":"spec", "version":specVersion,
"name":"MOTOR_ARRAY", "dispatchMode":None},
"%s_ltscan_arr" % motor_name)
MOTOR_ARRAY.setValue(SpecArray.SpecArray(pos_motor.ravel()))
LT_START = SpecVariable.SpecVariable('LT_START',specVersion)
LT_START.setValue(SpecArray.SpecArray(startIndex))
LT_STOP = SpecVariable.SpecVariable('LT_STOP',specVersion)
LT_STOP.setValue(SpecArray.SpecArray(stopIndex))
LT_LINE = SpecVariable.SpecVariable('LT_LINE',specVersion)
LT_LINE.setValue(len(stopIndex))
self._SpecCmd(str(mot1Widget.currentText()),str(mot2Widget.currentText()),ctime)
def __getMotor(self,userMotName,motorList) :
for mot in motorList:
if mot.getMotorMnemonic() == userMotName:
return mot
def _moveGraphicInBeam(self,beamx,beamy) :
pass
def __createPolygon(self,nb) :
try:
showgButton = self._widgetTree.child('__showGrab')
showgButton.setOn(True)
grabButton = self._widgetTree.child('__grabButton')
grabButton.setOn(False)
polygon = QubPolygoneDrawingMgr(self._view.canvas(),self._view.matrix())
polygon.setActionInfo('Drawing mask plygon %d' % self.__polyNb)
polygon.setEndDrawCallBack(self.__polygonCBK)
polygon.setAutoDisconnectEvent(True)
drawingObject = QubCanvasCloseLinePolygone(self._view.canvas())
polygon.addDrawingObject(drawingObject)
self._view.addDrawingMgr(polygon)
polygon.setColor(self._view.foregroundColor())
newItem = qt.QListViewItem(self.__polygonListWidget)
newItem.setText(0,'Polygon %d' % self.__polyNb)
newItem.setPixmap(0,Icons.load('Plus2'))
newItem.drawingManager = polygon
newItem.includeMode = True
self.__polyNb += 1
polygon.startDrawing()
except:
import traceback
traceback.print_exc()
def __removeSelectedPolygon(self,nb):
for item in self.__getIterator(True) :
self.__polygonListWidget.takeItem(item)
self.__setRegion()
def __revertSelectedPolygon(self,nb) :
for item in self.__getIterator(True) :
item.includeMode = not item.includeMode
if item.includeMode: pixmap = Icons.load('Plus2')
else: pixmap = Icons.load('Minus2')
item.setPixmap(0,pixmap)
self.__setRegion()
def __getIterator(self,selectedFilter = False) :
Item = self.__polygonListWidget.firstChild()
while Item:
NextItem = Item.nextSibling()
selectedFlag = Item.isSelected()
if not selectedFilter or selectedFlag :
yield Item
Item = NextItem
def __polygonPopUpDisplay(self,item,point,columnid) :
self.__polygonPopUpMenu.exec_loop(point)
def __polygonCBK(self,drawingManager) :
self.__setRegion()
def __createGridPoints(self) :
# del old grid point
self.__gridPoints = None
table = self._widgetTree.child('__gridTable')
stringVal = table.text(0,0)
nbAxis1,okFlag = stringVal.toInt()
if not okFlag: return
stringVal = table.text(1,0)
nbAxis2,okFlag = stringVal.toInt()
if not okFlag: return
if self._graphicSelection.points() :
points = numpy.array([[x,y] for x,y in self._graphicSelection.points()])
angle = self._graphicSelection.angle()[0] * math.pi / 180
rotation = numpy.matrix([[numpy.cos(angle),-numpy.sin(angle)],
[numpy.sin(angle),numpy.cos(angle)]])
translation = numpy.matrix([points[0][0],points[0][1]])
points -= translation
points = points * rotation
points = numpy.array([[x,y] for y in numpy.linspace(points[0,1],points[2,1],nbAxis2 + 1) for x in numpy.linspace(points[0,0],points[1,0],nbAxis1 + 1)])
rotation = numpy.matrix([[numpy.cos(-angle),-numpy.sin(-angle)],
[numpy.sin(-angle),numpy.cos(-angle)]])
self.__gridPoints = points * rotation
self.__gridPoints += translation
self.__checkPolygoneItersection()
def __checkPolygoneItersection(self) :
self._matchPoints = None
if self.__gridPoints is None : return
includePolygone,excludePolygone = [],[]
for item in self.__getIterator() :
points = item.drawingManager.points()
if item.includeMode : includePolygone.append(points)
else: excludePolygone.append(points)
pointGrid = self.__gridPoints.tolist()
allInPoints = []
if includePolygone :
for points in includePolygone:
pInPoly = polygone.points_inclusion(pointGrid,points,False)
if not allInPoints :
allInPoints = pInPoly
else:
allInPoints = [x > 0 or y > 0 for x,y in itertools.izip(pInPoly,allInPoints)]
if not allInPoints :
allInPoints = [True for x in range(len(self.__gridPoints))]
for points in excludePolygone:
pInPoly = polygone.points_inclusion(pointGrid,points,False)
allInPoints = [x > 0 and not y > 0 for x,y in itertools.izip(allInPoints,pInPoly)]
self._matchPoints = allInPoints
self.__refreshInfoText()
def __refreshInfoText(self) :
if self._matchPoints :
matchPoint = self._matchPoints.count(True)
textInfo = self._widgetTree.child('__info')
timeString = self._widgetTree.child('__time').text()
time,valid = timeString.toFloat()
if valid :
delta = datetime.timedelta(0,time) * matchPoint
textInfo.setText('%d points in scan until %s' % (matchPoint,
(datetime.datetime.today() + delta).strftime('%HH%M')))
else:
textInfo.setText('%d points in scan' % matchPoint)
def __setRegion(self,aCheckPolygoneFlag = True) :
addRegion = []
minusRegion = []
for item in self.__getIterator() :
array = qt.QPointArray(len(item.drawingManager.points()))
for i,(x,y) in enumerate(item.drawingManager.points()) :
array.setPoint(i,x,y)
region = qt.QRegion(array)
if item.includeMode: addRegion.append(region)
else: minusRegion.append(region)
self._graphicSelection.setRegion(addRegion,minusRegion)
if aCheckPolygoneFlag: self.__checkPolygoneItersection()
def _setColor(self,color) :
BaseGraphicScan._setColor(self,color)
for item in self.__getIterator() :
item.drawingManager.setColor(color)
def _showGrabScan(self,aFlag) :
BaseGraphicScan._showGrabScan(self,aFlag)
for item in self.__getIterator() :
if aFlag:
item.drawingManager.show()
else:
item.drawingManager.hide()
def __createPolygon(self,nb) :
try:
showgButton = self._widgetTree.child('__showGrab')
showgButton.setOn(True)
grabButton = self._widgetTree.child('__grabButton')
grabButton.setOn(False)
polygon = QubPolygoneDrawingMgr(self._view.canvas(),self._view.matrix())
polygon.setActionInfo('Drawing mask plygon %d' % self.__polyNb)
polygon.setEndDrawCallBack(self.__polygonCBK)
polygon.setAutoDisconnectEvent(True)
drawingObject = QubCanvasCloseLinePolygone(self._view.canvas())
polygon.addDrawingObject(drawingObject)
self._view.addDrawingMgr(polygon)
polygon.setColor(self._view.foregroundColor())
newItem = qt.QListViewItem(self.__polygonListWidget)
newItem.setText(0,'Polygon %d' % self.__polyNb)
newItem.setPixmap(0,Icons.load('Plus2'))
newItem.drawingManager = polygon
newItem.includeMode = True
self.__polyNb += 1
polygon.startDrawing()
except:
import traceback
traceback.print_exc()
class MxLookupScanBrick(BaseGraphicScan) :
def __init__(self,parent,name,uifile = 'MxLookupScan.ui',**kwargs) :
BaseGraphicScan.__init__(self, parent, name, uifile=uifile, **kwargs)
self._graphicSelection = None
self.__gridPoints = None
self._matchPoints = None
self.__offsetMeasure = 1e3
self.old_mot1_pos = None
self.old_mot2_pos = None
self._shape_history = None
self.addProperty('offsetmeasure','float',1e3)
self.defineSignal("addToQueue", ())
self.defineSignal('clearQueue', ())
self.defineSignal("dataCollectParametersRequest", ())
self.defineSignal("goToCollect", ())
table = self._widgetTree.child('__gridTable')
qt.QObject.connect(table,qt.SIGNAL('valueChanged(int,int)'),self._valueChangedScanParam)
timeWidget = self._widgetTree.child('__time')
timeWidget.setValidator(qt.QDoubleValidator(timeWidget))
timeWidget = self._widgetTree.child('__time')
timeWidget.hide()
def propertyChanged(self,property,oldValue,newValue):
if property == 'offsetmeasure':
self.__offsetMeasure = newValue
elif property == 'command':
pass
else:
BaseGraphicScan.propertyChanged(self,property,oldValue,newValue)
def run(self):
BaseGraphicScan.run(self)
startButton = self._widgetTree.child('__startScan')
startButton.hide()
stopButton = self._widgetTree.child('__stopScan')
stopButton.hide()
if self._horizontalMotors and self._verticalMotors:
startButton.setEnabled(True)
mot1 = self._horizontalMotors[0]
mot2 = self._verticalMotors[0]
self.old_mot1_pos = mot1.getPosition()
self.old_mot2_pos = mot2.getPosition()
mot1.connect('positionChanged', self.mot1_position_changed)
mot2.connect('positionChanged', self.mot2_position_changed)
table = self._widgetTree.child('__gridTable')
table.setText(0, 0, "2")
table.setText(1, 0, "2")
dispatcher.connect(self._askedForGrid, "grid")
def mot1_position_changed(self, new_pos):
if self.old_mot1_pos is None:
self.old_mot1_pos = new_pos
else:
if not hasattr(self._graphicSelection, "_xy_in_mm"):
return
mot1 = self._horizontalMotors[0]
dx = new_pos - self.old_mot1_pos
current_x = self._graphicSelection.x()[0]
current_y = self._graphicSelection.y()[0]
#new_x = current_x-(dx*0.85*mot1.getProperty('unit')/self._XSize)
new_x = current_x-(dx*mot1.getProperty('unit')/self._XSize)
self._graphicSelection.move(new_x,current_y, 0)
points = self._graphicSelection.points()
self._graphicSelection._xy_in_mm = numpy.array([(points[0][0] - self._beamx) * self._XSize,
(points[0][1] - self._beamy) * self._YSize])
self.old_mot1_pos = new_pos
def mot2_position_changed(self, new_pos):
if self.old_mot2_pos is None:
self.old_mot2_pos = new_pos
else:
if not hasattr(self._graphicSelection, "_xy_in_mm"):
return
mot2=self._verticalMotors[0]
dy = new_pos - self.old_mot2_pos
current_x = self._graphicSelection.x()[0]
current_y = self._graphicSelection.y()[0]
new_y = current_y-(dy*mot2.getProperty('unit')/self._YSize)
self._graphicSelection.move(current_x, new_y, 0)
points = self._graphicSelection.points()
self._graphicSelection._xy_in_mm = numpy.array([(points[0][0] - self._beamx) * self._XSize,
(points[0][1] - self._beamy) * self._YSize])
self.old_mot2_pos = new_pos
def _setMotor(self,property,motorList):
pass
def _viewConnect(self,view) :
self._graphicSelection = QubPolygoneDrawingMgr(view.canvas(),
view.matrix())
self._graphicSelection.setActionInfo('Define grid: select the area')
drawingobject = QubCanvasGrid(view.canvas())
self._graphicSelection.addDrawingObject(drawingobject)
self._graphicSelection.setEndDrawCallBack(self.__endGridGrab)
view.addDrawingMgr(self._graphicSelection)
def __endGridGrab(self,drawingobject):
self.__createGridPoints()
points = self._graphicSelection.points()
if len(points) == 3 and self._XSize and self._YSize:
self._graphicSelection._xy_in_mm = numpy.array([(points[0][0] - self._beamx) * self._XSize,
(points[0][1] - self._beamy) * self._YSize])
table = self._widgetTree.child('__gridTable')
dist = math.sqrt(((points[0][0] - points[1][0]) * self._XSize ) ** 2 + \
((points[0][1] - points[1][1]) * self._YSize) ** 2)
table.setText(0,2,self._formatString % (dist * self.__offsetMeasure))
dist = math.sqrt(((points[1][0] - points[2][0]) * self._YSize) ** 2 + \
((points[1][1] - points[2][1]) * self._XSize) ** 2)
table.setText(1,2,self._formatString % (dist * self.__offsetMeasure))
self.__refreshSteps()
def _updateGUI(self):
if self._graphicSelection:
if self._XSize and self._YSize:
#showgButton = self._widgetTree.child('__showGrab')
#if showgButton.isOn():
# self._graphicSelection.show()
self._valueChangedScanParam(0,2)
self._valueChangedScanParam(1,2)
else:
pass
#self._graphicSelection.hide()
def _valueChangedScanParam(self,row,column) :
table = self._widgetTree.child('__gridTable')
if column == 0:
stringVal = table.text(row,column)
val,okFlag = stringVal.toInt()
if okFlag :
self.__refreshSteps()
if row == 0 :
self._graphicSelection.setNbPointAxis1(val-1)
else:
self._graphicSelection.setNbPointAxis2(val-1)
self.__createGridPoints()
else:
dialog = qt.QErrorMessage(self)
dialog.message('Interval must be integer')
elif column == 1:
stringVal = table.text(row,column)
step,ok1 = stringVal.toFloat()
stringVal = table.text(row,0)
interval,ok2 = stringVal.toInt()
if ok1 and step > 0.:
if ok2:
distance = interval * step
table.setText(row,2,self._formatString % distance)
self._valueChangedScanParam(row,2)
else:
dialog = qt.QErrorMessage(self)
dialog.message('Step must be a positive float')
elif column == 2:
self.__refreshSteps()
# UPDATE GRAPHIC
points = self._graphicSelection.points()
if len(points) == 3 :
angle = self._graphicSelection.angle()[0] * math.pi / 180
pixelSize = math.sqrt((self._XSize * math.cos(angle)) ** 2 + \
(self._YSize * math.sin(angle)) ** 2)
if row == 0 :
stringVal = table.text(0,2)
dist1,ok1 = stringVal.toFloat()
dist1 /= self.__offsetMeasure
width = dist1 / pixelSize
height = math.sqrt(((points[1][0] - points[2][0])) ** 2 + \
((points[1][1] - points[2][1])) ** 2)
else:
width = math.sqrt(((points[0][0] - points[1][0])) ** 2 + \
((points[0][1] - points[1][1])) ** 2)
stringVal = table.text(1,2)
dist2,ok2 = stringVal.toFloat()
dist2 /= self.__offsetMeasure
height = dist2 / pixelSize
xori = (self._graphicSelection._xy_in_mm[0] / self._XSize) + self._beamx
yori = (self._graphicSelection._xy_in_mm[1] / self._YSize) + self._beamy
#xori, yori = points[0]
#p = numpy.array([[xori,yori],[xori + width,yori],[xori + width,yori + height]])
p = numpy.array([[0,0],[width,0],[width,height]])
translation = numpy.matrix([xori,yori])
rotation = numpy.matrix([[numpy.cos(-angle),-numpy.sin(-angle)],
[numpy.sin(-angle),numpy.cos(-angle)]])
#p -= translation
p = p * rotation
p += translation
self._graphicSelection.setPoints(p.tolist())
def _askedForGrid(self, grid_dict):
self.__createGridPoints()
grid_dict.update(self.__refreshSteps())
def __refreshSteps(self):
table = self._widgetTree.child('__gridTable')
# DISTANCE
stringVal = table.text(0,2)
dist1,ok1 = stringVal.toFloat()
stringVal = table.text(1,2)
dist2,ok2 = stringVal.toFloat()
# INTERVALS
if ok1 and ok2 :
stringVal = table.text(0,0)
inter1,ok1 = stringVal.toInt()
inter1 = inter1 - 1
if inter1 < 1:
qt.QMessageBox.warning(self, "Invalid value for points per line", "There should be at least 2 points per line for mesh", qt.QMessageBox.Ok)
return
if ok1:
step = dist1 / inter1
table.setText(0,1,self._formatString % step)
stringVal = table.text(1,0)
inter2,ok2 = stringVal.toInt()
inter2 = inter2 - 1
if inter2 < 1:
qt.QMessageBox.warning(self, "Invalid value for points per line", "There should be at least 2 points per line for mesh", qt.QMessageBox.Ok)
return
if ok2 :
step = dist2 / inter2
table.setText(1,1,self._formatString % step)
if not self._matchPoints:
self.emit(qt.PYSIGNAL("addToQueue"), ({}, ))
return
try:
firstPoint = self._matchPoints.index(True)
except:
return
mot1 = self._horizontalMotors[0]
mot2 = self._verticalMotors[0]
x,y = self.__gridPoints[firstPoint,0],self.__gridPoints[firstPoint,1]
angle = self._graphicSelection.angle()[0]
return {"dx_mm": float(dist1),
"dy_mm": float(dist2),
"steps_x": int(inter1)+1,
"steps_y": int(inter2)+1,
"x1": float((x - self._beamx) / mot1.getProperty('unit') * self._XSize),
"y1": float((y - self._beamy) / mot2.getProperty('unit') * self._YSize),
"angle": angle}
def _movetoStart(self) :
if not self._matchPoints :
return
mot1 = self._horizontalMotors[0]
mot2 = self._verticalMotors[0]
try:
firstPoint = self._matchPoints.index(True)
except:
return # No scan point
x,y = self.__gridPoints[firstPoint,0],self.__gridPoints[firstPoint,1]
try:
mot1Fp = (x - self._beamx) / mot1.getProperty('unit') * self._XSize
mot2Fp = (y - self._beamy) / mot2.getProperty('unit') * self._YSize
mot1Fp += mot1.getPosition()
mot2Fp += mot2.getPosition()
mot1.move(float(mot1Fp))
mot2.move(float(mot2Fp))
xtranslation,ytranslation = (self._beamx - x,self._beamy - y)
translationMatrix = numpy.matrix([xtranslation,ytranslation])
self.__gridPoints += translationMatrix
self._moveGraphicInBeam(self._beamx,self._beamy)
except AttributeError :
logging.getLogger().exception("motors must have a unit field")
def _startScan(self):
self._scanFinished()
try :
self._matchPoints.index(True) # if not point math -> go to exception
except ValueError:
dialog = qt.QErrorMessage(self)
dialog.message('Nothing to scan')
return
table = self._widgetTree.child('__gridTable')
stringVal = table.text(0,0)
nbColumn,valid = stringVal.toInt()
if not valid :
dialog = qt.QErrorMessage(self)
dialog.message('Interval must be integer')
return
nbColumn += 1
posMot1 = []
posMot2 = []
pointMatchNb = 0
matchPointId = []
for i,(match,point) in enumerate(itertools.izip(self._matchPoints,self.__gridPoints)) :
if match :
posMot1.append(point[0,0])
posMot2.append(point[0,1])
matchPointId.append((i / nbColumn,pointMatchNb))
pointMatchNb += 1
if posMot1:
timeWidget = self._widgetTree.child('__time')
ctime,valid = timeWidget.text().toFloat()
if not valid :
dialog = qt.QErrorMessage(self)
dialog.message('Time must be float')
return
mot1 = self._horizontalMotors[0]
mot2 = self._verticalMotors[0]
posMot1 = numpy.array(posMot1)
posMot1 -= self._beamx
posMot1 *= (self._XSize / mot1.getProperty('unit'))
posMot1 += mot1.getPosition()
posMot2 = numpy.array(posMot2)
posMot2 -= self._beamy
posMot2 *= (self._YSize / mot2.getProperty('unit'))
posMot2 += mot2.getPosition()
lineStartStop = []
lastLineId = -1
currentPointInLine = []
for lineId,pointId in matchPointId:
if lineId != lastLineId :
if currentPointInLine:
lineStartStop.append(currentPointInLine)
currentPointInLine = [pointId]
lastLineId = lineId
else:
currentPointInLine.append(pointId)
if currentPointInLine :
lineStartStop.append(currentPointInLine)
startIndex = []
stopIndex = []
for line in lineStartStop:
startIndex.append(line[0])
stopIndex.append(line[-1])
startIndex = numpy.array(startIndex)
stopIndex = numpy.array(stopIndex)
self.emit(qt.PYSIGNAL("clearQueue"), (0, )) #clear entire queue
params = {}
self.emit(qt.PYSIGNAL("dataCollectParametersRequest"), (params,))
# determine points and add to queue
collectList = []
params["exposure_time"]=str(ctime)
params["directory"]=os.path.join(params["directory"], "mesh")
params["osc_range"]="0.5"
params["number_images"]="1"
params["osc_start"]=params["current_osc_start"]
motor1_name = mot1.getMotorMnemonic()
motor2_name = mot2.getMotorMnemonic()
i = 1
for pos1, pos2 in zip(posMot1, posMot2):
oscillation_parameters = { "motors": {mot1:float(pos1), mot2:float(pos2) }}
oscillation_parameters.update(params)
oscillation_parameters["run_number"]=i
i+=1
oscillation_parameters["comments"]="%s: %f, %s: %f" % (motor1_name, pos1, motor2_name, pos2)
self.emit(qt.PYSIGNAL("addToQueue"), ([oscillation_parameters], ))
self.emit(qt.PYSIGNAL("goToCollect"), ())
def _moveGraphicInBeam(self,beamx,beamy) :
self._graphicSelection.move(beamx, beamy, 0)
def __createGridPoints(self) :
# del old grid point
self.__gridPoints = None
table = self._widgetTree.child('__gridTable')
stringVal = table.text(0,0)
nbAxis1,okFlag = stringVal.toInt()
if not okFlag: return
stringVal = table.text(1,0)
nbAxis2,okFlag = stringVal.toInt()
if not okFlag: return
if self._graphicSelection.points() :
points = numpy.array([[x,y] for x,y in self._graphicSelection.points()])
angle = self._graphicSelection.angle()[0] * math.pi / 180
rotation = numpy.matrix([[numpy.cos(angle),-numpy.sin(angle)],
[numpy.sin(angle),numpy.cos(angle)]])
translation = numpy.matrix([points[0][0],points[0][1]])
points -= translation
points = points * rotation
points = numpy.array([[x,y] for y in numpy.linspace(points[0,1],points[2,1],nbAxis2) for x in numpy.linspace(points[0,0],points[1,0],nbAxis1)])
rotation = numpy.matrix([[numpy.cos(-angle),-numpy.sin(-angle)],
[numpy.sin(-angle),numpy.cos(-angle)]])
self.__gridPoints = points * rotation
self.__gridPoints += translation
# grid == points
self._matchPoints = [True for x in self.__gridPoints.tolist()]
def _setColor(self,color) :
BaseGraphicScan._setColor(self,color)
def _showGrabScan(self,aFlag) :
BaseGraphicScan._showGrabScan(self,aFlag)
class LookupScanBrick(BaseGraphicScan):
def __init__(self,
parent,
name,
uifile='LookupScan.ui',
cmd_name='ltscan',
**kwargs):
BaseGraphicScan.__init__(self,
parent,
name,
uifile=uifile,
cmd_name=cmd_name,
**kwargs)
self._graphicSelection = None
self.__polyNb = 0
self.__gridPoints = None
self._matchPoints = None
self.__offsetMeasure = 1e3
self._ltinit = None
self.addProperty('offsetmeasure', 'float', 1e3)
table = self._widgetTree.child('__gridTable')
qt.QObject.connect(table, qt.SIGNAL('valueChanged(int,int)'),
self._valueChangedScanParam)
timeWidget = self._widgetTree.child('__time')
timeWidget.setValidator(qt.QDoubleValidator(timeWidget))
# PopUp Menu
self.__polygonListWidget = self._widgetTree.child('__polygonList')
self.__polygonListWidget.setSelectionMode(qt.QListView.Extended)
self.__polygonPopUpMenu = qt.QPopupMenu(self.__polygonListWidget)
for itemName, cbk in [('Create new', self.__createPolygon),
('Remove', self.__removeSelectedPolygon),
('Revert selection',
self.__revertSelectedPolygon)]:
self.__polygonPopUpMenu.insertItem(itemName, cbk)
self.connect(
self.__polygonListWidget,
qt.SIGNAL('rightButtonPressed(QListViewItem*,const QPoint &,int)'),
self.__polygonPopUpDisplay)
timeWidget = self._widgetTree.child('__time')
self.connect(timeWidget, qt.SIGNAL('returnPressed()'),
self.__refreshInfoText)
self.connect(timeWidget, qt.SIGNAL('lostFocus()'),
self.__refreshInfoText)
def propertyChanged(self, property, oldValue, newValue):
if property == 'offsetmeasure':
self.__offsetMeasure = newValue
elif property == 'command':
BaseGraphicScan.propertyChanged(self, property, oldValue, newValue)
ho = self.getHardwareObject(newValue)
if ho is not None:
try:
self._ltinit = ho.getCommandObject('ltinit')
self._ltinit.connectSignal('commandReplyArrived',
self.__ltinitFinished)
except:
self._ltinit = None
logging.getLogger().error(
'ltinit not find in command file')
startButton = self._widgetTree.child('__startScan')
startButton.setEnabled(False)
else:
BaseGraphicScan.propertyChanged(self, property, oldValue, newValue)
def _setMotor(self, property, motorList):
if property == 'horizontal':
combo = self._widgetTree.child('__motor1')
else:
combo = self._widgetTree.child('__motor2')
for i in range(combo.count()):
combo.removeItem(i)
combo.insertStringList(motorList)
def _viewConnect(self, view):
self._graphicSelection = QubPolygoneDrawingMgr(view.canvas(),
view.matrix())
self._graphicSelection.setActionInfo('Grid grab, select the area')
drawingobject = QubCanvasGrid(view.canvas())
self._graphicSelection.addDrawingObject(drawingobject)
self._graphicSelection.setEndDrawCallBack(self.__endGridGrab)
view.addDrawingMgr(self._graphicSelection)
def __endGridGrab(self, drawingobject):
self.__createGridPoints()
self._updateGUI()
def _updateGUI(self):
if self._graphicSelection:
points = self._graphicSelection.points()
if len(points) == 3 and self._XSize and self._YSize:
table = self._widgetTree.child('__gridTable')
try:
dist = math.sqrt(((points[0][0] - points[1][0]) * self._XSize ) ** 2 + \
((points[0][1] - points[1][1]) * self._YSize) ** 2)
table.setText(
0, 2,
self._formatString % (dist * self.__offsetMeasure))
dist = math.sqrt(((points[1][0] - points[2][0]) * self._YSize) ** 2 + \
((points[1][1] - points[2][1]) * self._XSize) ** 2)
table.setText(
1, 2,
self._formatString % (dist * self.__offsetMeasure))
self.__refreshSteps()
except:
import traceback
traceback.print_exc()
def _valueChangedScanParam(self, row, column):
table = self._widgetTree.child('__gridTable')
if column == 0:
stringVal = table.text(row, column)
val, okFlag = stringVal.toInt()
if okFlag:
if row == 0:
self._graphicSelection.setNbPointAxis1(val)
else:
self._graphicSelection.setNbPointAxis2(val)
self.__refreshSteps()
self.__createGridPoints()
else:
dialog = qt.QErrorMessage(self)
dialog.message('Interval must be integer')
elif column == 1:
stringVal = table.text(row, column)
step, ok1 = stringVal.toFloat()
stringVal = table.text(row, 0)
interval, ok2 = stringVal.toInt()
if ok1 and step > 0.:
if ok2:
distance = interval * step
table.setText(row, 2, self._formatString % distance)
self._valueChangedScanParam(row, 2)
else:
dialog = qt.QErrorMessage(self)
dialog.message('Step must be a positif float')
elif column == 2:
self.__refreshSteps()
# UPDATE GRAPHIC
points = self._graphicSelection.points()
if len(points) == 3:
angle = self._graphicSelection.angle()[0] * math.pi / 180
pixelSize = math.sqrt((self._XSize * math.cos(angle)) ** 2 + \
(self._YSize * math.sin(angle)) ** 2)
if row == 0:
stringVal = table.text(0, 2)
dist1, ok1 = stringVal.toFloat()
dist1 /= self.__offsetMeasure
width = dist1 / pixelSize
height = math.sqrt(((points[1][0] - points[2][0])) ** 2 + \
((points[1][1] - points[2][1])) ** 2)
else:
width = math.sqrt(((points[0][0] - points[1][0])) ** 2 + \
((points[0][1] - points[1][1])) ** 2)
stringVal = table.text(1, 2)
dist2, ok2 = stringVal.toFloat()
dist2 /= self.__offsetMeasure
height = dist2 / pixelSize
xori, yori = points[0]
p = numpy.array([[xori, yori], [xori + width, yori],
[xori + width, yori + height]])
translation = numpy.matrix([xori, yori])
rotation = numpy.matrix(
[[numpy.cos(-angle), -numpy.sin(-angle)],
[numpy.sin(-angle), numpy.cos(-angle)]])
p -= translation
p = p * rotation
p += translation
self._graphicSelection.setPoints(p.tolist())
def __refreshSteps(self):
table = self._widgetTree.child('__gridTable')
# DISTANCE
stringVal = table.text(0, 2)
dist1, ok1 = stringVal.toFloat()
stringVal = table.text(1, 2)
dist2, ok2 = stringVal.toFloat()
# INTERVALS
if ok1 and ok2:
stringVal = table.text(0, 0)
inter1, ok1 = stringVal.toInt()
if ok1:
step = dist1 / inter1
table.setText(0, 1, self._formatString % step)
stringVal = table.text(1, 0)
inter2, ok2 = stringVal.toInt()
if ok2:
step = dist2 / inter2
table.setText(1, 1, self._formatString % step)
def _movetoStart(self):
if not self._matchPoints:
return
mot1Widget = self._widgetTree.child('__motor1')
mot2Widget = self._widgetTree.child('__motor2')
mot1 = self.__getMotor(mot1Widget.currentText(),
self._horizontalMotors)
mot2 = self.__getMotor(mot2Widget.currentText(), self._verticalMotors)
try:
firstPoint = self._matchPoints.index(True)
except:
return # No scan point
x, y = self.__gridPoints[firstPoint, 0], self.__gridPoints[firstPoint,
1]
try:
mot1Fp = (x - self._beamx) / mot1.getProperty('unit') * self._XSize
mot2Fp = (y - self._beamy) / mot2.getProperty('unit') * self._YSize
mot1Fp += mot1.getPosition()
mot2Fp += mot2.getPosition()
mot1.move(float(mot1Fp))
mot2.move(float(mot2Fp))
xtranslation, ytranslation = (self._beamx - x, self._beamy - y)
graphicItems = [x.drawingManager for x in self.__getIterator()]
graphicItems.append(self._graphicSelection)
for item in graphicItems:
newPoint = []
for x, y in item.points():
x, y = (x + xtranslation, y + ytranslation)
newPoint.append((x, y))
item.setPoints(newPoint)
translationMatrix = numpy.matrix([xtranslation, ytranslation])
self.__gridPoints += translationMatrix
self.__setRegion(False)
except AttributeError:
import traceback
traceback.print_exc()
logging.getLogger().error('motors must have a unit field')
def _startScan(self):
try:
self._matchPoints.index(
True) # if not point math -> go to exception
mot1Widget = self._widgetTree.child('__motor1')
mot2Widget = self._widgetTree.child('__motor2')
self._ltinit(str(mot1Widget.currentText()),
str(mot2Widget.currentText()))
except ValueError:
dialog = qt.QErrorMessage(self)
dialog.message('Nothing to scan')
return
def __ltinitFinished(self, *args):
table = self._widgetTree.child('__gridTable')
stringVal = table.text(0, 0)
nbColumn, valid = stringVal.toInt()
if not valid:
dialog = qt.QErrorMessage(self)
dialog.message('Interval must be integer')
return
nbColumn += 1
self._logArgs['scan_type'] = 'lookup'
posMot1 = []
posMot2 = []
pointMatchNb = 0
matchPointId = []
for i, (match, point) in enumerate(
itertools.izip(self._matchPoints, self.__gridPoints)):
if match:
posMot1.append(point[0, 0])
posMot2.append(point[0, 1])
matchPointId.append((i / nbColumn, pointMatchNb))
pointMatchNb += 1
if posMot1:
mot1Widget = self._widgetTree.child('__motor1')
mot2Widget = self._widgetTree.child('__motor2')
timeWidget = self._widgetTree.child('__time')
ctime, valid = timeWidget.text().toFloat()
mot1 = self.__getMotor(mot1Widget.currentText(),
self._horizontalMotors)
mot2 = self.__getMotor(mot2Widget.currentText(),
self._verticalMotors)
posMot1 = numpy.array(posMot1)
posMot1 -= self._beamx
posMot1 *= (self._XSize / mot1.getProperty('unit'))
posMot1 += mot1.getPosition()
posMot2 = numpy.array(posMot2)
posMot2 -= self._beamy
posMot2 *= (self._YSize / mot2.getProperty('unit'))
posMot2 += mot2.getPosition()
lineStartStop = []
lastLineId = -1
currentPointInLine = []
for lineId, pointId in matchPointId:
if lineId != lastLineId:
if currentPointInLine:
lineStartStop.append(currentPointInLine)
currentPointInLine = [pointId]
lastLineId = lineId
else:
currentPointInLine.append(pointId)
if currentPointInLine:
lineStartStop.append(currentPointInLine)
startIndex = []
stopIndex = []
for line in lineStartStop:
startIndex.append(line[0])
stopIndex.append(line[-1])
startIndex = numpy.array(startIndex)
stopIndex = numpy.array(stopIndex)
specVersion = self._ltinit.specVersion
for motor_name, pos_motor in zip(
[str(mot1Widget.currentText()),
str(mot2Widget.currentText())], [posMot1, posMot2]):
ho = self.getHardwareObject(self["command"])
MOTOR_ARRAY = ho.addChannel(
{
"type": "spec",
"version": specVersion,
"name": "MOTOR_ARRAY",
"dispatchMode": None
}, "%s_ltscan_arr" % motor_name)
MOTOR_ARRAY.setValue(SpecArray.SpecArray(pos_motor.ravel()))
LT_START = SpecVariable.SpecVariable('LT_START', specVersion)
LT_START.setValue(SpecArray.SpecArray(startIndex))
LT_STOP = SpecVariable.SpecVariable('LT_STOP', specVersion)
LT_STOP.setValue(SpecArray.SpecArray(stopIndex))
LT_LINE = SpecVariable.SpecVariable('LT_LINE', specVersion)
LT_LINE.setValue(len(stopIndex))
self._SpecCmd(str(mot1Widget.currentText()),
str(mot2Widget.currentText()), ctime)
def __getMotor(self, userMotName, motorList):
for mot in motorList:
if mot.getMotorMnemonic() == userMotName:
return mot
def _moveGraphicInBeam(self, beamx, beamy):
pass
def __createPolygon(self, nb):
try:
showgButton = self._widgetTree.child('__showGrab')
showgButton.setOn(True)
grabButton = self._widgetTree.child('__grabButton')
grabButton.setOn(False)
polygon = QubPolygoneDrawingMgr(self._view.canvas(),
self._view.matrix())
polygon.setActionInfo('Drawing mask plygon %d' % self.__polyNb)
polygon.setEndDrawCallBack(self.__polygonCBK)
polygon.setAutoDisconnectEvent(True)
drawingObject = QubCanvasCloseLinePolygone(self._view.canvas())
polygon.addDrawingObject(drawingObject)
self._view.addDrawingMgr(polygon)
polygon.setColor(self._view.foregroundColor())
newItem = qt.QListViewItem(self.__polygonListWidget)
newItem.setText(0, 'Polygon %d' % self.__polyNb)
newItem.setPixmap(0, Icons.load('Plus2'))
newItem.drawingManager = polygon
newItem.includeMode = True
self.__polyNb += 1
polygon.startDrawing()
except:
import traceback
traceback.print_exc()
def __removeSelectedPolygon(self, nb):
for item in self.__getIterator(True):
self.__polygonListWidget.takeItem(item)
self.__setRegion()
def __revertSelectedPolygon(self, nb):
for item in self.__getIterator(True):
item.includeMode = not item.includeMode
if item.includeMode: pixmap = Icons.load('Plus2')
else: pixmap = Icons.load('Minus2')
item.setPixmap(0, pixmap)
self.__setRegion()
def __getIterator(self, selectedFilter=False):
Item = self.__polygonListWidget.firstChild()
while Item:
NextItem = Item.nextSibling()
selectedFlag = Item.isSelected()
if not selectedFilter or selectedFlag:
yield Item
Item = NextItem
def __polygonPopUpDisplay(self, item, point, columnid):
self.__polygonPopUpMenu.exec_loop(point)
def __polygonCBK(self, drawingManager):
self.__setRegion()
def __createGridPoints(self):
# del old grid point
self.__gridPoints = None
table = self._widgetTree.child('__gridTable')
stringVal = table.text(0, 0)
nbAxis1, okFlag = stringVal.toInt()
if not okFlag: return
stringVal = table.text(1, 0)
nbAxis2, okFlag = stringVal.toInt()
if not okFlag: return
if self._graphicSelection.points():
points = numpy.array([[x, y]
for x, y in self._graphicSelection.points()])
angle = self._graphicSelection.angle()[0] * math.pi / 180
rotation = numpy.matrix([[numpy.cos(angle), -numpy.sin(angle)],
[numpy.sin(angle),
numpy.cos(angle)]])
translation = numpy.matrix([points[0][0], points[0][1]])
points -= translation
points = points * rotation
points = numpy.array(
[[x, y]
for y in numpy.linspace(points[0, 1], points[2,
1], nbAxis2 + 1)
for x in numpy.linspace(points[0,
0], points[1,
0], nbAxis1 + 1)])
rotation = numpy.matrix([[numpy.cos(-angle), -numpy.sin(-angle)],
[numpy.sin(-angle),
numpy.cos(-angle)]])
self.__gridPoints = points * rotation
self.__gridPoints += translation
self.__checkPolygoneItersection()
def __checkPolygoneItersection(self):
self._matchPoints = None
if self.__gridPoints is None: return
includePolygone, excludePolygone = [], []
for item in self.__getIterator():
points = item.drawingManager.points()
if item.includeMode: includePolygone.append(points)
else: excludePolygone.append(points)
pointGrid = self.__gridPoints.tolist()
allInPoints = []
if includePolygone:
for points in includePolygone:
pInPoly = polygone.points_inclusion(pointGrid, points, False)
if not allInPoints:
allInPoints = pInPoly
else:
allInPoints = [
x > 0 or y > 0
for x, y in itertools.izip(pInPoly, allInPoints)
]
if not allInPoints:
allInPoints = [True for x in range(len(self.__gridPoints))]
for points in excludePolygone:
pInPoly = polygone.points_inclusion(pointGrid, points, False)
allInPoints = [
x > 0 and not y > 0
for x, y in itertools.izip(allInPoints, pInPoly)
]
self._matchPoints = allInPoints
self.__refreshInfoText()
def __refreshInfoText(self):
if self._matchPoints:
matchPoint = self._matchPoints.count(True)
textInfo = self._widgetTree.child('__info')
timeString = self._widgetTree.child('__time').text()
time, valid = timeString.toFloat()
if valid:
delta = datetime.timedelta(0, time) * matchPoint
textInfo.setText(
'%d points in scan until %s' %
(matchPoint,
(datetime.datetime.today() + delta).strftime('%HH%M')))
else:
textInfo.setText('%d points in scan' % matchPoint)
def __setRegion(self, aCheckPolygoneFlag=True):
addRegion = []
minusRegion = []
for item in self.__getIterator():
array = qt.QPointArray(len(item.drawingManager.points()))
for i, (x, y) in enumerate(item.drawingManager.points()):
array.setPoint(i, x, y)
region = qt.QRegion(array)
if item.includeMode: addRegion.append(region)
else: minusRegion.append(region)
self._graphicSelection.setRegion(addRegion, minusRegion)
if aCheckPolygoneFlag: self.__checkPolygoneItersection()
def _setColor(self, color):
BaseGraphicScan._setColor(self, color)
for item in self.__getIterator():
item.drawingManager.setColor(color)
def _showGrabScan(self, aFlag):
BaseGraphicScan._showGrabScan(self, aFlag)
for item in self.__getIterator():
if aFlag:
item.drawingManager.show()
else:
item.drawingManager.hide()
def __createPolygon(self, nb):
try:
showgButton = self._widgetTree.child('__showGrab')
showgButton.setOn(True)
grabButton = self._widgetTree.child('__grabButton')
grabButton.setOn(False)
polygon = QubPolygoneDrawingMgr(self._view.canvas(),
self._view.matrix())
polygon.setActionInfo('Drawing mask plygon %d' % self.__polyNb)
polygon.setEndDrawCallBack(self.__polygonCBK)
polygon.setAutoDisconnectEvent(True)
drawingObject = QubCanvasCloseLinePolygone(self._view.canvas())
polygon.addDrawingObject(drawingObject)
self._view.addDrawingMgr(polygon)
polygon.setColor(self._view.foregroundColor())
newItem = qt.QListViewItem(self.__polygonListWidget)
newItem.setText(0, 'Polygon %d' % self.__polyNb)
newItem.setPixmap(0, Icons.load('Plus2'))
newItem.drawingManager = polygon
newItem.includeMode = True
self.__polyNb += 1
polygon.startDrawing()
except:
import traceback
traceback.print_exc()
class MxLookupScanBrick(BaseGraphicScan):
def __init__(self, parent, name, uifile='MxLookupScan.ui', **kwargs):
BaseGraphicScan.__init__(self, parent, name, uifile=uifile, **kwargs)
self._graphicSelection = None
self.__gridPoints = None
self._matchPoints = None
self.__offsetMeasure = 1e3
self.old_mot1_pos = None
self.old_mot2_pos = None
self._shape_history = None
self.addProperty('offsetmeasure', 'float', 1e3)
self.defineSignal("addToQueue", ())
self.defineSignal('clearQueue', ())
self.defineSignal("dataCollectParametersRequest", ())
self.defineSignal("goToCollect", ())
table = self._widgetTree.child('__gridTable')
qt.QObject.connect(table, qt.SIGNAL('valueChanged(int,int)'),
self._valueChangedScanParam)
timeWidget = self._widgetTree.child('__time')
timeWidget.setValidator(qt.QDoubleValidator(timeWidget))
timeWidget = self._widgetTree.child('__time')
timeWidget.hide()
def propertyChanged(self, property, oldValue, newValue):
if property == 'offsetmeasure':
self.__offsetMeasure = newValue
elif property == 'command':
pass
else:
BaseGraphicScan.propertyChanged(self, property, oldValue, newValue)
def run(self):
BaseGraphicScan.run(self)
startButton = self._widgetTree.child('__startScan')
startButton.hide()
stopButton = self._widgetTree.child('__stopScan')
stopButton.hide()
if self._horizontalMotors and self._verticalMotors:
startButton.setEnabled(True)
mot1 = self._horizontalMotors[0]
mot2 = self._verticalMotors[0]
self.old_mot1_pos = mot1.getPosition()
self.old_mot2_pos = mot2.getPosition()
mot1.connect('positionChanged', self.mot1_position_changed)
mot2.connect('positionChanged', self.mot2_position_changed)
table = self._widgetTree.child('__gridTable')
table.setText(0, 0, "2")
table.setText(1, 0, "2")
dispatcher.connect(self._askedForGrid, "grid")
def mot1_position_changed(self, new_pos):
if self.old_mot1_pos is None:
self.old_mot1_pos = new_pos
else:
if not hasattr(self._graphicSelection, "_xy_in_mm"):
return
mot1 = self._horizontalMotors[0]
dx = new_pos - self.old_mot1_pos
current_x = self._graphicSelection.x()[0]
current_y = self._graphicSelection.y()[0]
#new_x = current_x-(dx*0.85*mot1.getProperty('unit')/self._XSize)
new_x = current_x - (dx * mot1.getProperty('unit') / self._XSize)
self._graphicSelection.move(new_x, current_y, 0)
points = self._graphicSelection.points()
self._graphicSelection._xy_in_mm = numpy.array([
(points[0][0] - self._beamx) * self._XSize,
(points[0][1] - self._beamy) * self._YSize
])
self.old_mot1_pos = new_pos
def mot2_position_changed(self, new_pos):
if self.old_mot2_pos is None:
self.old_mot2_pos = new_pos
else:
if not hasattr(self._graphicSelection, "_xy_in_mm"):
return
mot2 = self._verticalMotors[0]
dy = new_pos - self.old_mot2_pos
current_x = self._graphicSelection.x()[0]
current_y = self._graphicSelection.y()[0]
new_y = current_y - (dy * mot2.getProperty('unit') / self._YSize)
self._graphicSelection.move(current_x, new_y, 0)
points = self._graphicSelection.points()
self._graphicSelection._xy_in_mm = numpy.array([
(points[0][0] - self._beamx) * self._XSize,
(points[0][1] - self._beamy) * self._YSize
])
self.old_mot2_pos = new_pos
def _setMotor(self, property, motorList):
pass
def _viewConnect(self, view):
self._graphicSelection = QubPolygoneDrawingMgr(view.canvas(),
view.matrix())
self._graphicSelection.setActionInfo('Define grid: select the area')
drawingobject = QubCanvasGrid(view.canvas())
self._graphicSelection.addDrawingObject(drawingobject)
self._graphicSelection.setEndDrawCallBack(self.__endGridGrab)
view.addDrawingMgr(self._graphicSelection)
def __endGridGrab(self, drawingobject):
self.__createGridPoints()
points = self._graphicSelection.points()
if len(points) == 3 and self._XSize and self._YSize:
self._graphicSelection._xy_in_mm = numpy.array([
(points[0][0] - self._beamx) * self._XSize,
(points[0][1] - self._beamy) * self._YSize
])
table = self._widgetTree.child('__gridTable')
dist = math.sqrt(((points[0][0] - points[1][0]) * self._XSize ) ** 2 + \
((points[0][1] - points[1][1]) * self._YSize) ** 2)
table.setText(0, 2,
self._formatString % (dist * self.__offsetMeasure))
dist = math.sqrt(((points[1][0] - points[2][0]) * self._YSize) ** 2 + \
((points[1][1] - points[2][1]) * self._XSize) ** 2)
table.setText(1, 2,
self._formatString % (dist * self.__offsetMeasure))
self.__refreshSteps()
def _updateGUI(self):
if self._graphicSelection:
if self._XSize and self._YSize:
#showgButton = self._widgetTree.child('__showGrab')
#if showgButton.isOn():
# self._graphicSelection.show()
self._valueChangedScanParam(0, 2)
self._valueChangedScanParam(1, 2)
else:
pass
#self._graphicSelection.hide()
def _valueChangedScanParam(self, row, column):
table = self._widgetTree.child('__gridTable')
if column == 0:
stringVal = table.text(row, column)
val, okFlag = stringVal.toInt()
if okFlag:
self.__refreshSteps()
if row == 0:
self._graphicSelection.setNbPointAxis1(val - 1)
else:
self._graphicSelection.setNbPointAxis2(val - 1)
self.__createGridPoints()
else:
dialog = qt.QErrorMessage(self)
dialog.message('Interval must be integer')
elif column == 1:
stringVal = table.text(row, column)
step, ok1 = stringVal.toFloat()
stringVal = table.text(row, 0)
interval, ok2 = stringVal.toInt()
if ok1 and step > 0.:
if ok2:
distance = interval * step
table.setText(row, 2, self._formatString % distance)
self._valueChangedScanParam(row, 2)
else:
dialog = qt.QErrorMessage(self)
dialog.message('Step must be a positive float')
elif column == 2:
self.__refreshSteps()
# UPDATE GRAPHIC
points = self._graphicSelection.points()
if len(points) == 3:
angle = self._graphicSelection.angle()[0] * math.pi / 180
pixelSize = math.sqrt((self._XSize * math.cos(angle)) ** 2 + \
(self._YSize * math.sin(angle)) ** 2)
if row == 0:
stringVal = table.text(0, 2)
dist1, ok1 = stringVal.toFloat()
dist1 /= self.__offsetMeasure
width = dist1 / pixelSize
height = math.sqrt(((points[1][0] - points[2][0])) ** 2 + \
((points[1][1] - points[2][1])) ** 2)
else:
width = math.sqrt(((points[0][0] - points[1][0])) ** 2 + \
((points[0][1] - points[1][1])) ** 2)
stringVal = table.text(1, 2)
dist2, ok2 = stringVal.toFloat()
dist2 /= self.__offsetMeasure
height = dist2 / pixelSize
xori = (self._graphicSelection._xy_in_mm[0] /
self._XSize) + self._beamx
yori = (self._graphicSelection._xy_in_mm[1] /
self._YSize) + self._beamy
#xori, yori = points[0]
#p = numpy.array([[xori,yori],[xori + width,yori],[xori + width,yori + height]])
p = numpy.array([[0, 0], [width, 0], [width, height]])
translation = numpy.matrix([xori, yori])
rotation = numpy.matrix(
[[numpy.cos(-angle), -numpy.sin(-angle)],
[numpy.sin(-angle), numpy.cos(-angle)]])
#p -= translation
p = p * rotation
p += translation
self._graphicSelection.setPoints(p.tolist())
def _askedForGrid(self, grid_dict):
self.__createGridPoints()
grid_dict.update(self.__refreshSteps())
def __refreshSteps(self):
table = self._widgetTree.child('__gridTable')
# DISTANCE
stringVal = table.text(0, 2)
dist1, ok1 = stringVal.toFloat()
stringVal = table.text(1, 2)
dist2, ok2 = stringVal.toFloat()
# INTERVALS
if ok1 and ok2:
stringVal = table.text(0, 0)
inter1, ok1 = stringVal.toInt()
inter1 = inter1 - 1
if inter1 < 1:
qt.QMessageBox.warning(
self, "Invalid value for points per line",
"There should be at least 2 points per line for mesh",
qt.QMessageBox.Ok)
return
if ok1:
step = dist1 / inter1
table.setText(0, 1, self._formatString % step)
stringVal = table.text(1, 0)
inter2, ok2 = stringVal.toInt()
inter2 = inter2 - 1
if inter2 < 1:
qt.QMessageBox.warning(
self, "Invalid value for points per line",
"There should be at least 2 points per line for mesh",
qt.QMessageBox.Ok)
return
if ok2:
step = dist2 / inter2
table.setText(1, 1, self._formatString % step)
if not self._matchPoints:
self.emit(qt.PYSIGNAL("addToQueue"), ({}, ))
return
try:
firstPoint = self._matchPoints.index(True)
except:
return
mot1 = self._horizontalMotors[0]
mot2 = self._verticalMotors[0]
x, y = self.__gridPoints[firstPoint, 0], self.__gridPoints[firstPoint,
1]
angle = self._graphicSelection.angle()[0]
return {
"dx_mm": float(dist1),
"dy_mm": float(dist2),
"steps_x": int(inter1) + 1,
"steps_y": int(inter2) + 1,
"x1": float(
(x - self._beamx) / mot1.getProperty('unit') * self._XSize),
"y1": float(
(y - self._beamy) / mot2.getProperty('unit') * self._YSize),
"angle": angle
}
def _movetoStart(self):
if not self._matchPoints:
return
mot1 = self._horizontalMotors[0]
mot2 = self._verticalMotors[0]
try:
firstPoint = self._matchPoints.index(True)
except:
return # No scan point
x, y = self.__gridPoints[firstPoint, 0], self.__gridPoints[firstPoint,
1]
try:
mot1Fp = (x - self._beamx) / mot1.getProperty('unit') * self._XSize
mot2Fp = (y - self._beamy) / mot2.getProperty('unit') * self._YSize
mot1Fp += mot1.getPosition()
mot2Fp += mot2.getPosition()
mot1.move(float(mot1Fp))
mot2.move(float(mot2Fp))
xtranslation, ytranslation = (self._beamx - x, self._beamy - y)
translationMatrix = numpy.matrix([xtranslation, ytranslation])
self.__gridPoints += translationMatrix
self._moveGraphicInBeam(self._beamx, self._beamy)
except AttributeError:
logging.getLogger().exception("motors must have a unit field")
def _startScan(self):
self._scanFinished()
try:
self._matchPoints.index(
True) # if not point math -> go to exception
except ValueError:
dialog = qt.QErrorMessage(self)
dialog.message('Nothing to scan')
return
table = self._widgetTree.child('__gridTable')
stringVal = table.text(0, 0)
nbColumn, valid = stringVal.toInt()
if not valid:
dialog = qt.QErrorMessage(self)
dialog.message('Interval must be integer')
return
nbColumn += 1
posMot1 = []
posMot2 = []
pointMatchNb = 0
matchPointId = []
for i, (match,
point) in enumerate(zip(self._matchPoints, self.__gridPoints)):
if match:
posMot1.append(point[0, 0])
posMot2.append(point[0, 1])
matchPointId.append((i / nbColumn, pointMatchNb))
pointMatchNb += 1
if posMot1:
timeWidget = self._widgetTree.child('__time')
ctime, valid = timeWidget.text().toFloat()
if not valid:
dialog = qt.QErrorMessage(self)
dialog.message('Time must be float')
return
mot1 = self._horizontalMotors[0]
mot2 = self._verticalMotors[0]
posMot1 = numpy.array(posMot1)
posMot1 -= self._beamx
posMot1 *= (self._XSize / mot1.getProperty('unit'))
posMot1 += mot1.getPosition()
posMot2 = numpy.array(posMot2)
posMot2 -= self._beamy
posMot2 *= (self._YSize / mot2.getProperty('unit'))
posMot2 += mot2.getPosition()
lineStartStop = []
lastLineId = -1
currentPointInLine = []
for lineId, pointId in matchPointId:
if lineId != lastLineId:
if currentPointInLine:
lineStartStop.append(currentPointInLine)
currentPointInLine = [pointId]
lastLineId = lineId
else:
currentPointInLine.append(pointId)
if currentPointInLine:
lineStartStop.append(currentPointInLine)
startIndex = []
stopIndex = []
for line in lineStartStop:
startIndex.append(line[0])
stopIndex.append(line[-1])
startIndex = numpy.array(startIndex)
stopIndex = numpy.array(stopIndex)
self.emit(qt.PYSIGNAL("clearQueue"), (0, )) #clear entire queue
params = {}
self.emit(qt.PYSIGNAL("dataCollectParametersRequest"), (params, ))
# determine points and add to queue
collectList = []
params["exposure_time"] = str(ctime)
params["directory"] = os.path.join(params["directory"], "mesh")
params["osc_range"] = "0.5"
params["number_images"] = "1"
params["osc_start"] = params["current_osc_start"]
motor1_name = mot1.getMotorMnemonic()
motor2_name = mot2.getMotorMnemonic()
i = 1
for pos1, pos2 in zip(posMot1, posMot2):
oscillation_parameters = {
"motors": {
mot1: float(pos1),
mot2: float(pos2)
}
}
oscillation_parameters.update(params)
oscillation_parameters["run_number"] = i
i += 1
oscillation_parameters["comments"] = "%s: %f, %s: %f" % (
motor1_name, pos1, motor2_name, pos2)
self.emit(qt.PYSIGNAL("addToQueue"),
([oscillation_parameters], ))
self.emit(qt.PYSIGNAL("goToCollect"), ())
def _moveGraphicInBeam(self, beamx, beamy):
self._graphicSelection.move(beamx, beamy, 0)
def __createGridPoints(self):
# del old grid point
self.__gridPoints = None
table = self._widgetTree.child('__gridTable')
stringVal = table.text(0, 0)
nbAxis1, okFlag = stringVal.toInt()
if not okFlag: return
stringVal = table.text(1, 0)
nbAxis2, okFlag = stringVal.toInt()
if not okFlag: return
if self._graphicSelection.points():
points = numpy.array([[x, y]
for x, y in self._graphicSelection.points()])
angle = self._graphicSelection.angle()[0] * math.pi / 180
rotation = numpy.matrix([[numpy.cos(angle), -numpy.sin(angle)],
[numpy.sin(angle),
numpy.cos(angle)]])
translation = numpy.matrix([points[0][0], points[0][1]])
points -= translation
points = points * rotation
points = numpy.array(
[[x, y]
for y in numpy.linspace(points[0, 1], points[2, 1], nbAxis2)
for x in numpy.linspace(points[0, 0], points[1, 0], nbAxis1)])
rotation = numpy.matrix([[numpy.cos(-angle), -numpy.sin(-angle)],
[numpy.sin(-angle),
numpy.cos(-angle)]])
self.__gridPoints = points * rotation
self.__gridPoints += translation
# grid == points
self._matchPoints = [True for x in self.__gridPoints.tolist()]
def _setColor(self, color):
BaseGraphicScan._setColor(self, color)
def _showGrabScan(self, aFlag):
BaseGraphicScan._showGrabScan(self, aFlag)