def cluster(): from clustergrammer import Network net = Network() vect_post = net.load_json_to_dict('fake_vect_post.json') net.load_vect_post_to_net(vect_post) net.swap_nan_for_zero() # net.N_top_views() net.make_filtered_views(dist_type='cos',views=['N_row_sum','N_row_var'], dendro=True) net.write_json_to_file('viz','json/large_vect_post_example.json','indent')
def cluster(): from clustergrammer import Network net = Network() vect_post = net.load_json_to_dict('fake_vect_post.json') net.load_vect_post_to_net(vect_post) net.swap_nan_for_zero() # net.N_top_views() net.make_filtered_views(dist_type='cos',views=['N_row_sum','N_row_var'], dendro=True) net.write_json_to_file('viz','json/large_vect_post_example.json','indent')
def cluster(): from clustergrammer import Network net = Network() vect_post = net.load_json_to_dict("fake_vect_post.json") net.load_vect_post_to_net(vect_post) net.swap_nan_for_zero() # net.N_top_views() net.make_filtered_views(dist_type="cos", views=["N_row_sum", "N_row_var"], dendro=True) net.write_json_to_file("viz", "json/large_vect_post_example.json", "indent")
def post_request(): from clustergrammer_old import Network import requests import json net = Network() vect_post = net.load_json_to_dict('fake_vect_post.json') upload_url = 'http://localhost:9000/clustergrammer/vector_upload/' r = requests.post(upload_url, json.dumps(vect_post)) response_json = json.loads(r.text) link = response_json['link'] print(link.split('viz/')[1])
def post_request(): from clustergrammer_old import Network import requests import json print('vector upload') net = Network() vect_post = net.load_json_to_dict('fake_vect_post.json') # upload_url = 'http://localhost:9000/clustergrammer/vector_upload/' # upload_url = 'http://0.0.0.0:8087/clustergrammer/vector_upload/' upload_url = 'http://amp.pharm.mssm.edu/clustergrammer/vector_upload/' print('making request') r = requests.post(upload_url, json.dumps(vect_post)) response_json = json.loads(r.text) link = response_json['link'] print(link.split('clustergrammer/')[1])
def post_request(): from clustergrammer_old import Network import requests import json print("vector upload") net = Network() vect_post = net.load_json_to_dict("fake_vect_post.json") # upload_url = 'http://localhost:9000/clustergrammer/vector_upload/' # upload_url = 'http://0.0.0.0:8087/clustergrammer/vector_upload/' upload_url = "http://amp.pharm.mssm.edu/clustergrammer/vector_upload/" print("making request") r = requests.post(upload_url, json.dumps(vect_post)) response_json = json.loads(r.text) link = response_json["link"] print(link.split("clustergrammer/")[1])
def post_request(): from clustergrammer_old import Network import requests import json from flask import current_app print('vector upload') net = Network() vect_post = net.load_json_to_dict('fake_vect_post.json') # upload_url = 'http://localhost:9000/clustergrammer/vector_upload/' # upload_url = 'http://0.0.0.0:8087/clustergrammer/vector_upload/' upload_url = current_app.config['ORIGIN'] + current_app.config['ENTRY_POINT'] + '/vector_upload/' print('making request') r = requests.post(upload_url, json.dumps(vect_post)) response_json = json.loads(r.text) link = response_json['link'] print(link.split('clustergrammer/')[1])