Esempio n. 1
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def cluster():
  from clustergrammer import Network
  net = Network()
  vect_post = net.load_json_to_dict('fake_vect_post.json')  

  net.load_vect_post_to_net(vect_post)

  net.swap_nan_for_zero()
  
  # net.N_top_views()
  net.make_filtered_views(dist_type='cos',views=['N_row_sum','N_row_var'], dendro=True)

  net.write_json_to_file('viz','json/large_vect_post_example.json','indent')  
Esempio n. 2
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def cluster():
  from clustergrammer import Network
  net = Network()
  vect_post = net.load_json_to_dict('fake_vect_post.json')

  net.load_vect_post_to_net(vect_post)

  net.swap_nan_for_zero()

  # net.N_top_views()
  net.make_filtered_views(dist_type='cos',views=['N_row_sum','N_row_var'], dendro=True)

  net.write_json_to_file('viz','json/large_vect_post_example.json','indent')
def cluster():
    from clustergrammer import Network

    net = Network()
    vect_post = net.load_json_to_dict("fake_vect_post.json")

    net.load_vect_post_to_net(vect_post)

    net.swap_nan_for_zero()

    # net.N_top_views()
    net.make_filtered_views(dist_type="cos", views=["N_row_sum", "N_row_var"], dendro=True)

    net.write_json_to_file("viz", "json/large_vect_post_example.json", "indent")
Esempio n. 4
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def post_request():
  from clustergrammer_old import Network
  import requests
  import json 

  net = Network()
  vect_post = net.load_json_to_dict('fake_vect_post.json')

  upload_url = 'http://localhost:9000/clustergrammer/vector_upload/'

  r = requests.post(upload_url, json.dumps(vect_post))

  response_json = json.loads(r.text)

  link = response_json['link']

  print(link.split('viz/')[1])  
Esempio n. 5
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def post_request():
  from clustergrammer_old import Network
  import requests
  import json

  print('vector upload')

  net = Network()
  vect_post = net.load_json_to_dict('fake_vect_post.json')

  # upload_url = 'http://localhost:9000/clustergrammer/vector_upload/'
  # upload_url = 'http://0.0.0.0:8087/clustergrammer/vector_upload/'
  upload_url = 'http://amp.pharm.mssm.edu/clustergrammer/vector_upload/'

  print('making request')
  r = requests.post(upload_url, json.dumps(vect_post))

  response_json = json.loads(r.text)

  link = response_json['link']

  print(link.split('clustergrammer/')[1])
def post_request():
    from clustergrammer_old import Network
    import requests
    import json

    print("vector upload")

    net = Network()
    vect_post = net.load_json_to_dict("fake_vect_post.json")

    # upload_url = 'http://localhost:9000/clustergrammer/vector_upload/'
    # upload_url = 'http://0.0.0.0:8087/clustergrammer/vector_upload/'
    upload_url = "http://amp.pharm.mssm.edu/clustergrammer/vector_upload/"

    print("making request")
    r = requests.post(upload_url, json.dumps(vect_post))

    response_json = json.loads(r.text)

    link = response_json["link"]

    print(link.split("clustergrammer/")[1])
Esempio n. 7
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def post_request():
  from clustergrammer_old import Network
  import requests
  import json
  from flask import current_app

  print('vector upload')

  net = Network()
  vect_post = net.load_json_to_dict('fake_vect_post.json')

  # upload_url = 'http://localhost:9000/clustergrammer/vector_upload/'
  # upload_url = 'http://0.0.0.0:8087/clustergrammer/vector_upload/'
  upload_url = current_app.config['ORIGIN'] + current_app.config['ENTRY_POINT'] + '/vector_upload/'

  print('making request')
  r = requests.post(upload_url, json.dumps(vect_post))

  response_json = json.loads(r.text)

  link = response_json['link']

  print(link.split('clustergrammer/')[1])