Beispiel #1
0
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refinement = 'indeg_guided'

vals = [0.1, 0.2, 0.5, 0.7]
first = True
n = 1000

# Query graph, the bigger one
clusters = pd.random_clusters(n, 8)
inter = 0.1
intra = 0.1
oG, oGT, olabeling = pd.custom_cluster_matrix(n, clusters, inter, 1, intra, 0)
c = Codec(0.15, 0.5, 5)
k, epsilon, classes, sze_idx, reg_list, nirr = c.compress(oG, refinement)
query = c.reduced_matrix(oG, k, epsilon, classes, reg_list)

# Database
c = Codec(0.2, 0.5, 5)
num_c = 8
for r in range(5):
    for i in vals:

        clusters = pd.random_clusters(n, num_c)
        G, GT, labeling = pd.custom_cluster_matrix(n, clusters, i, 1, i, 0)
        k, epsilon, classes, sze_idx, reg_list, nirr = c.compress(
            G, refinement)
        red = c.reduced_matrix(G, k, epsilon, classes, reg_list)

        if query.shape[0] > red.shape[0]:
            sd = metrics.spectral_dist(query, red)
        tm = time.time()
        k, epsilon, classes, sze_idx, reg_list, nirr = c.compress(G, 'indeg_guided')
        tcompression1 = time.time() - tm
        #print(f"TIME: tcompression1:{tcompression1:.2f}")

        # Compression G1
        c = Codec(0.285, 0.285, 1)
        c.verbose = False
        tm = time.time()
        k2, epsilon, classes2, sze_idx, reg_list2, nirr2 = c.compress(G2, 'indeg_guided')
        tcompression2 = time.time() - tm
        #print(f"TIME: tcompression2:{tcompression2:.2f}")       

        # Reduced graph
        tm = time.time()
        red = c.reduced_matrix(G, k, epsilon, classes, reg_list)
        red2 = c.reduced_matrix(G2, k2, epsilon, classes2, reg_list2)
        tred = time.time() - tm
        #print(f"TIME: red:{tred:.2f}")

        # Original SD
        tm = time.time()
        sd_o = metrics.spectral_dist(G,G2)
        tsd =  time.time() - tm
        #print(f"TIME: tsd:{tsd:.2f}")

        # Reduced SD
        tm = time.time()
        sd_red = metrics.spectral_dist(red,red2)
        tsd_red = time.time() - tm
        #print(f"TIME: tsd_red:{tsd_red:.2f}")