def load_cfg(self):
Configure.load_cfg(self)
ucsc_db = self.cfg_vals[cbv_const.LATEST_UCSC_FILE_NAME]
ljb_db = self.cfg_vals[cbv_const.LATEST_LJB_FILE_PREFIX] + '.txt.gz'
self.__ucsc_reader = UcscReader()
self.__ucsc_reader.read(ucsc_db)
self.__ljb_reader = LjbReader()
self.__ljb_reader.read(ljb_db)
def __init__(self):
LjbUpdater.__init__(self)
Configure.__init__(self)
self.chromosome_list = ['1', '2', '3', '4', '5', '6', '7', '8', '9', '10', '11', '12', '13', '14', '15', '16', '17', '18', '19', '20', '21', '22', 'X', 'Y']
def __init__(self):
UcscUpdater.__init__(self)
Configure.__init__(self)
def __init__(self):
Configure.__init__(self)
