model.name = "Model " +str(cell)+ "/adaptive/" + str(knot_rate)
models[cell][model.name] = model
E1 = 'trial_reshuffle_'
E1b = 'time_reshuffle_'
E2 = 'simple_model_'
E3 = 'complex_model_'
Es = [E1, E1b, E2, E3]
job "E1.1. Evaluate Models for Trial Reshuffling" for cell in model_cells for model in range(len(models[0])):
m = models[cell][sorted(models[cell].keys())[model]]
with View(job_path + '_results.html') as view:
b = bootstrap.bootstrap_trials(50,m,data,test_data=[test_data],shuffle=True)
stats.addNode(m.name,b)
for (dim, name) in [('EIC','EIC')]:
with view.figure("Cells/tabs/Cell "+str(cell)+"/tabs/"+str(name)):
plot(stats.get(dim))
for k in stats.keys():
with view.figure("Cells/tabs/Cell "+str(cell)+"/tabs/Betas/tabs/"+str(k)):
for b in stats.filter(k).get('beta'):
plot(b)
for b in stats.filter(k).get('boot_betas'):
for bb in b:
plot(bb,'--')
view.render(job_path + '_results.html')
stats.save(path + identifier + E1 + '_' + str(cell) + "_" + str(m.name).replace("/","_") + '_stats.stat')
job "E1.2. Saving Data":
require previous
crosshistory = sorted([cell,c1,c2])
model = ni.model.ip.Model(ni.model.ip.Configuration({'cell':cell, 'crosshistory':crosshistory}))
model.name = "Model " +str(cell)+ "/" +str("/".join([str(c) for c in crosshistory]))
models[cell][model.name] = model
E1 = 'reshuffle_trials_'
E1b = 'reshuffle_time_'
E2 = 'simple_model_'
E3 = 'complex_model_'
Es = [E1,E1b,E2,E3]
job "E1.1. Evaluate Models for Trial Reshuffling" for cell in model_cells for model in range(len(models[0])):
m = models[cell][sorted(models[cell].keys())[model]]
with View(job_path + '_results.html') as view:
b = bootstrap.bootstrap_trials(50,m,data,test_data=[test_data])
stats.addNode(m.name,b)
for (dim, name) in [('EIC','EIC')]:
with view.figure("Cells/tabs/Cell "+str(cell)+"/tabs/"+str(name)):
plot(stats.get(dim))
for k in stats.keys():
with view.figure("Cells/tabs/Cell "+str(cell)+"/tabs/Betas/tabs/"+str(k)):
for b in stats.filter(k).get('beta'):
plot(b)
for b in stats.filter(k).get('boot_betas'):
for bb in b:
plot(bb,'--')
view.render(job_path + '_results.html')
stats.save(path + identifier + E1 + '_' + str(cell) + "_" + str(m.name).replace("/","_") + '_stats.stat')
job "E1.2. Saving Data":
require previous
